百晓学者学者目录

刘晖

博士生导师、教授，哈尔滨医科大学

精选作品

期刊论文

2023

Insight into the regulatory mechanism of dynamic chromatin 3D interactions during cardiomyocyte differentiation in human

Hui Liu, Yingying Ma, Jia-Xin Yu, Xiang Chen, Shuyuan Wang, Yijie Jia, Na Ding, Xiao-Yan Jin, Yunpeng Zhang, Juan Xu, Xia Li

Molecular Therapy: Nucleic Acids

DOI

2022

单细胞转录组和单细胞染色质开放性图谱解析小鼠γδ T细胞异质性（英文）

李振华，杨全利，唐欣，陈一铭，王闪闪，齐晓杰，张亚雯，刘宗华，骆静，刘晖，巴永兵，郭练霞，吴宝剑，黄芳，曹广超，尹芝南

Science Bulletin

2019

A Novel Approach to Identify Enhancer lincRNAs by Integrating Genome, Epigenome, and Regulatome

Hui Liu, Tiantongfei Jiang, Shuyuan Wang, Xiang Chen, Xiao-Yan Jin, Qi Wang, Xinhui Li, Jiaqi Yin, Ting-Ting Shao, Yong-Sheng Li, Juan Xu, Qiong Wu

Frontiers in Bioengineering and Biotechnology

DOI

2019

Landscape of Enhancer-Enhancer Cooperative Regulation during Human Cardiac Commitment

Hong Chen, Jun Xiao, Ting-Ting Shao, Li Wang, J. Bai, Xiaoyu Lin, Na Ding, Yinwei Qu, Yi Tian, Xiang Chen, Hui Liu, Hongyu Liu, Juan Xu, Xia Li

Molecular Therapy: Nucleic Acids

DOI

2016

Computational identification of putative lincRNAs in mouse embryonic stem cell

Hui Liu, Jie Lyu, Hongbo Liu, Yang Gao, Jing Guo, Hongjuan He, Zhengbin Han, Yan Zhang, Qiong Wu

Scientific Reports

DOI

2014

MetaImprint: an information repository of mammalian imprinted genes

Yanjun Wei, Jianzhong Su, Hongbo Liu, Jie Lv, Fang Wang, Haidan Yan, Yanhua Wen, Hui Liu, Qiong Wu, Yan Zhang

Development

DOI

2013

Quantitative epigenetic co-variation in CpG islands and co-regulation of developmental genes

Hongbo Liu, Yanjun Chen, Jie Lv, Hui Liu, R. Zhu, Jianzhong Su, Xiaojuan Liu, Yan Zhang, Qiong Wu

Scientific Reports

DOI

2013

Revealing the architecture of genetic and epigenetic regulation: a maximum likelihood model

F. Wang, S. Zhang, Y. Wen, Y. Wei, Han Yan, Hui Liu, Jianzhong Su, Yan Zhang, J. Che

Briefings in Bioinformatics

DOI

2013

Predicting Long Non-coding RNAs Based on Genomic Sequence Information

Jie Lv, Hongbo Liu, Hui Liu, Qiong Di Wu, Yan Zhang

Computational Molecular Biology

DOI

2012

CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data

Jianzhong Su, Haidan Yan, Yanjun Wei, Hongbo Liu, Hui Liu, Fang Wang, Jie Lv, Qiong Wu, Yan Zhang

Nucleic Acids Research

DOI

2011

Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency

R. Hawkins, G. Hon, Chuhu Yang, Jessica E. Antosiewicz-Bourget, Leonard K. Lee, Que-Minh Ngo, Sarit A. Klugman, Keith A Ching, Lee E. Edsall, Zhen Ye, Samantha Kuan, Pengzhi Yu, Hui Liu, Xinmin Zhang, Roland Green, Victor V Lobanenkov, R. Stewart, J. Thomson, B. Ren

Cell Research

DOI

2011

DiseaseMeth: a human disease methylation database

Jie Lv, Hongbo Liu, Jianzhong Su, Xueting Wu, Hui Liu, Boyan Li, Xue Xiao, Fang Wang, Qiong Wu, Yan Zhang

Nucleic Acids Res.

DOI

2009

Histone Modifications at Human Enhancers Reflect Global Cell Type-Specific Gene Expression

Nathaniel D. Heintzman, G. Hon, R. D. Hawkins, P. Kheradpour, A. Stark, L. F. Harp, Zhen Ye, Leonard K. Lee, R. Stuart, Christina W. Ching, Keith A Ching, Jessica E. Antosiewicz-Bourget, Hui Liu, Xinmin Zhang, Roland Green, Victor V Lobanenkov, R. Stewart, J. Thomson, Gregory E. Crawford, Manolis Kellis, B. Ren

Nature

DOI

2008

Chromatin structure analyses identify miRNA promoters.

Fatih Ozsolak, Laura L Poling, Zhengxin Wang, Hui Liu, X. Liu, R. Roeder, Xinmin Zhang, Jun S. Song, D. Fisher

Genes & Development

DOI

会议论文

2018

基于CpG位点的DNA甲基化水平的秩序关系识别结直肠癌的诊断标志

刘晖，谢诗扬，关庆洲，谢佳静，夏洁，邓旭晟，郭政，严海丹

《2018年中国肿瘤标志物学术大会暨第十二届肿瘤标志物青年科学家论坛论文集》

DOI

2012

Predicting cancer-related genes with DNA methylation based on protein-protein interaction network

Hui Liu, Jianzhong Su, Hongbo Liu, Yan Zhang

《第五届全国生物信息学与系统生物学学术大会暨国际生物信息学前沿研讨会高通量时代的生物信息学与系统生物学》

研究方向

生物信息学计算表观遗传学发育生物学生物医学人工智能与机器学习

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