百晓学者学者目录

程亮

副教授、博士生导师、教授、研究员，哈尔滨医科大学

精选作品

期刊论文

2026

gutMDisorder v3.0: an updated database for dysbiosis of the gut and oral microbiota in phenotypes and interventions

管思渊，Changlu Qi，Xingwang Liu，Baifeng Li，Yuanming Zhang，Hongwei Gao，Qiuhan Chen，Liang Cheng，Xue Zhang

Nucleic Acids Research

DOI

2026

pGWAS-Portal: a comprehensive online platform for integrative post-genome-wide association study analysis

Zijun Zhu, Hailong Li, Xin Wang, Xingwang Liu, Guoyou He, Xin Zhang, 管思渊, Junjie Wang, Qi Zhao, Ying Liu, Liang Cheng

BMC Genomics

DOI

2026

DECODE: deep learning-based common deconvolution framework for various omics data

Tianyi Zhao, Renjie Liu, Yuzhi Sun, Bingtian Wang, Liyuan Zhang, Qiuhao Chen, Ruibang Luo, Zhiyuan Yuan, Guohua Wang, Liang Cheng, Yadong Wang

Nature Methods

DOI

2026

Integrative multi-omics analysis reveals GLP-1R agonists-driven proteins via Notch signaling as mediators of ulcerative colitis risk

Hailong Li, Zijun Zhu, Xin Wang, Meiyu Du, Rongxing Wei, Chao Wang, Jinyuan Miao, Liang Cheng

Genes & Diseases

DOI

2026

Identification of small molecule inhibitors targeting FGFR through molecular docking-based screening

Weibo Hou, Kun Liu, Ping Wang, Kefan Zheng, Kong Qingran, Xinyu Wang, Qi Zhao, Liang Cheng

Frontiers in Oncology

DOI

2026

Genome‐Wide Cross‐Trait Analysis Dissects the Shared Genetic Architecture Between Type 2 Diabetes Mellitus and Metabolic Dysfunction–Associated Steatotic Liver Disease

Zijun Zhu, Hailong Li, Xin Wang, Xinyu Chen, Liang Cheng

Human Mutation

DOI

2025

肠道菌群与早晚期梅毒存在因果关系：基于孟德尔随机化方法

程亮，汪浩文，曹文娟，张召，宋文灿

《广东医科大学学报》

DOI

2025

gutMSNP: a comprehensive database for human gut microbial single-nucleotide polymorphisms

Kai Qian, Meiyu Du, Senwei Tan, Mingyang Ding, Meihui Song, Minke Lu, Changlu Qi, Liang Cheng, Xue Zhang

Nucleic Acids Research

DOI

2025

Large-scale multi-trait genome-wide analysis for inflammatory bowel disease reveals new insights into its molecular mechanisms and emphasizes the roles of systemic immune regulation

Zijun Zhu, Lei Shi, Hailong Li, Xin Wang, Jiwei Gao, Liang Cheng, Xue Zhang

Briefings in Bioinformatics

DOI

2025

Slc20a2 Deficiency Increases Susceptibility to CNS Demyelination Possibly Through Th17 Cells

Yueni Zhang, Xin Wang, Yaqiong Ren, Zitong Zhang, Ying Li, Ziyue Peng, Chao Xu, Liang Cheng, Xue Zhang

Journal of Neuroscience Research

DOI

2025

Cell type-specific eQTL analysis of COVID-19 based on single-cell transcriptomic data

Chao Wang, Xinyu Chen, Sainan Zhang, Zijun Zhu, Meiyu Du, Guanzhi He, Senwei Tan, Hailong Li, Duoyi Zhang, Jingqiao Bai, Liang Cheng

NAR Genomics and Bioinformatics

DOI

2025

CD160 dictates anti-PD-1 immunotherapy resistance by regulating CD8+ T cell exhaustion in colorectal cancer

Tongsen Zheng, Chujie Ding, Shihui Lai, Yang Gao, Cheng Lyu, Caiqi Liu, Jiaqi Shi, Xiaobo Li, Mingwei Li, Hongxue Meng, Mingqi Li, Yingjian Liang, Sheng Tai, Liang Cheng, Yan Zhang, Li Li, Peng Han, Bin Sun, Te Liu, Feng Geng, Dapeng Hao, Xue Zhang

Nature Cell Biology

DOI

2025

Long-read sequencing identifies ATXN3 repeat expansions, and transcriptomics reveals disease progression biomarkers and druggable targets for spinocerebellar ataxia type 3

Chang Liu, Xin Wang, Chao Xu, Xiaoxiang Liu, Liyan Ke, Ying Li, Hang Zhang, Jianqiang Tan, Senwei Tan, Zitong Zhang, Liang Cheng, Yaqiong Ren, Lei Shi

BMC Neurology

DOI

2025

mbSparse: an autoencoder-based imputation method to address sparsity in microbiome data

Changlu Qi, Yiting Cai, Guoyou He, Kai Qian, Mian Guo, Liang Cheng

Gut Microbes

DOI

2025

Multi-omics integration reveals functional signatures of gut microbiome in atherosclerosis

Hongbo Shi, Meitao Wu, Xiaoliang Wu, Zhuoxin Liu, Shuo Jiang, Gen Li, Yi Yang, Yanghe Fu, Qiuping Wang, Guangde Zhang, Liang Cheng

Gut Microbes

DOI

2025

Faecalibacterium prausnitzii prevents age-related heart failure by suppressing ferroptosis in cardiomyocytes through butyrate-mediated LCN2 regulation

Yun Zhang, Ying Wei, Xuejie Han, Ling Shi, Hui Yu, Xuanrui Ji, Yunlong Gao, Qianhui Gao, Linwei Zhang, Yu Duan, Wenpeng Li, Yue Yuan, Jing Shi, Liang Cheng, Yue Li

Gut Microbes

DOI

2025

OntoTiger: a platform of ontology-based application tools for integrative biomedical exploration

Haixiu Yang, Guoyou He, Meiyi Zhang, Hongyu Fu, Guanzhi He, Chao Wang, Yangyang Liu, Sainan Zhang, Tao Wang, Yongqun Oliver He, Liang Cheng

Nucleic Acids Research

DOI

2025

Multi-omic analyses of the development of obesity-related depression linked to the gut microbe Anaerotruncus colihominis and its metabolite glutamate

Zhengyan Chang, Yefei Zhu, Ping Wang, Lei Du, Minkang Wu, Xingchun Wang, Cheng Kong, Dengfeng Huang, Ruting Xie, Ji Guo, Chao Wang, Liang Cheng, Xuebing Yan, Qing Wei, Huanlong Qin

《中国科学通报：英文版》

DOI

2025

Accurate cross-species 5mC detection for Oxford Nanopore sequencing in plants with DeepPlant

He-Xu Chen, Zhendong Liu, Xin Bai, Bo Wu, Rong Song, Hui-Cong Yao, Ying Chen, Wei Chi, Qian Hua, Liang Cheng, Chuan‐Le Xiao

Nature Communications

DOI

2025

Integrating a multi-omics strategy framework to screen potential targets in cognitive impairment-related epilepsy

Chao Xu, Zijun Zhu, Xinyu Chen, Minke Lu, Chao Wang, Sainan Zhang, Sainan Zhang, Lei Shi, Liang Cheng, Xue Zhang

Methods

DOI

2025

Functional Characterization and In Silico Prediction Tools Improve the Pathogenicity Prediction of Novel Bile Acid Transporter Variants

Ziyue Peng, Xin Wang, Ying Li, Yaqiong Ren, Yuhuan Meng, Liwei Sun, Zitong Zhang, Yue Song, Yang Xia, Lei Shi, Shihui Yu, Liang Cheng, Xue Zhang

Clinical Genetics

DOI

2025

Joint analysis of genome‐wide cross‐trait and multi‐omics reveals molecular mechanisms of inflammatory bowel disease and nominates its novel therapeutic genes

Zijun Zhu, Rongxing Wei, Hailong Li, Xin Wang, Guanzhi He, Meiyu Du, Senwei Tan, Liang Cheng

The FASEB Journal

DOI

2025

Identification of the Metabolic Characteristic of Organ Fibrosis Using Microbial Analysis on RNA-seq Data

Zitong Wang, Ping Wang, Guoyou He, Liang Cheng, Tianyu Li, Yan Wang, Hong Li

Current Gene Therapy

DOI

2025

EnrichDO: a global weighted model for Disease Ontology enrichment analysis.

Haixiu Yang, Hongyu Fu, Meiyi Zhang, Yangyang Liu, Yongqun Oliver He, Chao Wang, Liang Cheng

PubMed

DOI

2024

SCovid v2.0: a comprehensive resource to decipher the molecular characteristics across tissues in COVID-19 and other human coronaviruses

Zijun Zhu, Xinyu Chen, Guoyou He, Rui Yu, Chao Wang, Changlu Qi, Liang Cheng

Microbiology Spectrum

DOI

2024

SV4GD: a comprehensive structural variation database specially for genetic diseases

Lei Shi, Sainan Zhang, Ying Li, Hailong Li, Xin Wang, Meiyu Du, Meiyi Zhang, Liyan Ke, Yueni Zhang, Chao Xu, Senwei Tan, Zitong Zhang, Duoyi Zhang, Jiaping Wang, Changlu Qi, Xingwang Liu, Xin Wang, Kai Qian, Liang Cheng, Xue Zhang

Nucleic Acids Research

DOI

2024

gutMGene v2.0: an updated comprehensive database for target genes of gut microbes and microbial metabolites

Changlu Qi, Guoyou He, Kai Qian, Siyuan Guan, Zhaohai Li, Shuang Liang, Juntao Liu, Xianzhe Ke, Sainan Zhang, Minke Lu, Liang Cheng, Xue Zhang

Nucleic Acids Research

DOI

2024

Single‐cell RNA sequencing reveals the heterogeneity of MYH11 + tumour‐associated fibroblasts between left‐sided and right‐sided colorectal cancer

Chao Wang, Yue Zhao, Sainan Zhang, Meiyu Du, Guanzhi He, Senwei Tan, Xiaojun Liu, Duoyi Zhang, Liang Cheng

Journal of Cellular and Molecular Medicine

DOI

2024

Deep Innovation and Application Exploration of Artificial Intelligence in the Medical Field

Liang Cheng

Current Gene Therapy

DOI

2024

Attention mechanism models for precision medicine

Liang Cheng

Briefings in Bioinformatics

DOI

2024

Effect of the gut microbiome, plasma metabolome, peripheral cells, and inflammatory cytokines on obesity: a bidirectional two-sample Mendelian randomization study and mediation analysis

Ying Li, Xin Wang, Zitong Zhang, Lei Shi, Liang Cheng, Xue Zhang

Frontiers in Immunology

DOI

2024

SCancerRNA: Expression at the Single-cell Level and Interaction Resource of Non-coding RNA Biomarkers for Cancers

Hongzhe Guo, Liyuan Zhang, Xinran Cui, Liang Cheng, Tianyi Zhao, Yadong Wang

Genomics Proteomics & Bioinformatics

DOI

2024

Exploring COVID-19 causal genes through disease-specific Cis-eQTLs

Sainan Zhang, Ping Wang, Lei Shi, Chao Wang, Zijun Zhu, Changlu Qi, Yubin Xie, Shuofeng Yuan, Liang Cheng, Xin Yin, Xue Zhang

Virus Research

DOI

2023

Effectiveness and Application Prospect of Microbiota-based Treatment

Liang Cheng

Current Gene Therapy

DOI

2023

Blood microbial analyses reveal long-term effects of SARS-CoV-2 infection on patients who recovered from COVID-19

Ping Wang, Sainan Zhang, Changlu Qi, Chao Wang, Zijun Zhu, Lei Shi, Liang Cheng, Xue Zhang

Computers in Biology and Medicine

DOI

2023

Combination of Anti–PD-1 and Electroacupuncture Induces a Potent Antitumor Immune Response in Microsatellite-Stable Colorectal Cancer

Yuan Wang, Fengyi Liu, Xiaoxue Du, Jiaqi Shi, Rui Yu, Shuang Li, Ruisi Na, Ying Zhao, Meng Zhou, Ying Guo, Liang Cheng, Guangyu Wang, Tongsen Zheng

Cancer Immunology Research

DOI

2023

Leveraging molecular quantitative trait loci to comprehend complex diseases/traits from the omics perspective

Zijun Zhu, Xinyu Chen, Sainan Zhang, Rui Yu, Changlu Qi, Liang Cheng, Xue Zhang

Human Genetics

DOI

2023

PathwayTMB: A pathway-based tumor mutational burden analysis method for predicting the clinical outcome of cancer immunotherapy

Xiangmei Li, Yalan He, Ying Jiang, Bingyue Pan, Jiashuo Wu, Xilong Zhao, Junling Huang, Qian Wang, Liang Cheng, Junwei Han

Molecular Therapy — Nucleic Acids

DOI

2023

Causal relationships between interleukins, interferons and COVID-19 risk: a Mendelian randomization study

Chao Wang, Xin Wang, Sainan Zhang, Peigang Xu, Liang Cheng

International Journal of Environmental Health Research

DOI

2023

Microbiome characteristics description of COVID-19 patients based on bulk RNA-seq and scRNA-Seq data

Sainan Zhang, Xingwang Liu, Yue Zhao, Ping Wang, Rui Yu, Peigang Xu, Yue Jiang, Liang Cheng

Computers in Biology and Medicine

DOI

2023

KRT13-expressing epithelial cell population predicts better response to chemotherapy and immunotherapy in bladder cancer: Comprehensive evidences based on BCa database

Donghu Yu, Chen Chen, Le Sun, Shaojie Wu, Xiaoyu Tang, Liye Mei, Cheng Lei, Du Wang, Xinghuan Wang, Liang Cheng, Sheng Li

Computers in Biology and Medicine

DOI

2023

iATMEcell: identification of abnormal tumor microenvironment cells to predict the clinical outcomes in cancer based on cell–cell crosstalk network

Yuqi Sheng, Jiashuo Wu, Xiangmei Li, Jiayue Qiu, Ji Li, Qinyu Ge, Liang Cheng, Junwei Han

Briefings in Bioinformatics

DOI

2023

An integrated strategy to identify COVID‐19 causal genes and characteristics represented by LRRC37A2

Zijun Zhu, Xinyu Chen, Chao Wang, Sainan Zhang, Rui Yu, Yubin Xie, Shuofeng Yuan, Liang Cheng, Lei Shi, Xue Zhang

Journal of Medical Virology

DOI

2023

Haemorrhoidal disease reduces the risk of diverticular disease and irritable bowel syndrome: a Mendelian randomisation study

Zijun Zhu, Xinyu Chen, Chao Wang, Sainan Zhang, Liang Cheng

Gut

DOI

2022

基于数据挖掘和网络药理学探讨中医药治疗结肠癌的配伍规律

兰济乐，童晓岚，程亮，阮叶萍

《临床医学研究与实践》

2022

DrugSim2DR: systematic prediction of drug functional similarities in the context of specific disease for drug repurposing

Jiashuo Wu, Ji Li, Yalan He, Junling Huang, Xilong Zhao, Bingyue Pan, Yahui Wang, Liang Cheng, Junwei Han

GigaScience

DOI

2022

Editorial: Identification of immune-related biomarkers for cancer diagnosis based on multi-omics data

Liang Cheng, Xin Zhang, Chuan-Xin Li, Rui Guo, Tianyi Zhao

Frontiers in Oncology

DOI

2022

A new framework for host-pathogen interaction research

Hong Jie Yu, Li Li, Anthony Huffman, John R. Beverley, Junguk Hur, Eric C. Merrell, Hsin-Hui Huang, Yang Wang, Yingtong Liu, Edison Ong, Liang Cheng, Tao Zeng, Jingsong Zhang, Pengpai Li, Zhi-Ping Liu, Zhigang Wang, Xiangyan Zhang, Xianwei Ye, Samuel K. Handelman, Jonathan Zachary Sexton, Kathryn A. Eaton, Gerry Higgins, Gilbert S. Omenn, Brian Athey, Barry Smith, Luonan Chen, Yongqun Oliver He

Frontiers in Immunology

DOI

2022

Effective Combination of Single-cell Analysis and Gene Therapy

Liang Cheng

Current Gene Therapy

DOI

2022

Genome-wide Mendelian randomization and single-cell RNA sequencing analyses identify the causal effects of COVID-19 on 41 cytokines

Chao Wang, Rui Yu, Sainan Zhang, Yue Zhao, Changlu Qi, Zijun Zhu, Xinyu Chen, Jianxing Bi, Peigang Xu, Liang Cheng, Xue Zhang

Briefings in Functional Genomics

DOI

2022

Omics data analysis and integration for COVID-19 patients – editorial

Liang Cheng

Briefings in Bioinformatics

DOI

2022

gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions

Changlu Qi, Yiting Cai, Kai Qian, Xuefeng Li, Jialiang Ren, Ping Wang, Tongze Fu, Tianyi Zhao, Liang Cheng, Lei Shi, Xue Zhang

Nucleic Acids Research

DOI

2022

microbioTA: an atlas of the microbiome in multiple disease tissues of Homo sapiens and Mus musculus

Ping Wang, Sainan Zhang, Guoyou He, Meiyu Du, Changlu Qi, Ruyue Liu, Siyuan Zhang, Liang Cheng, Lei Shi, Xue Zhang

Nucleic Acids Research

DOI

2022

MGPLI: exploring multigranular representations for protein–ligand interaction prediction

Junjie Wang, Jie Hu, Huiting Sun, Mengdie Xu, Yun Yu, Yun Liu, Liang Cheng

Bioinformatics

DOI

2022

Novel genes/loci validate the small effect size of ERBB2 in patients with myasthenia gravis

Zijun Zhu, Xinyu Chen, Chao Wang, Liang Cheng

Proceedings of the National Academy of Sciences

DOI

2022

Identification of Nine mRNA Signatures for Sepsis Using Random Forest

Jing Zhou, Siqing Dong, Ping Wang, Xi Su, Liang Cheng

Computational and Mathematical Methods in Medicine

DOI

2022

ELECTRA-DTA: a new compound-protein binding affinity prediction model based on the contextualized sequence encoding

Junjie Wang, Naifeng Wen, Chunyu Wang, Lingling Zhao, Liang Cheng

Journal of Cheminformatics

DOI

2022

Pan‐cancer analysis reveals sex‐specific signatures in the tumor microenvironment

Junwei Han, Yang Yang, Xiangmei Li, Jiashuo Wu, Yuqi Sheng, Jiayue Qiu, Qian Wang, Ji Li, Yalan He, Liang Cheng, Yan Zhang

Molecular Oncology

DOI

2022

BIN1 rs744373 located in enhancers of brain tissues upregulates BIN1 mRNA expression, thereby leading to Alzheimer's disease

Shizheng Qiu, Yang Hu, Liang Cheng

Alzheimer s & Dementia

DOI

2022

A brief review of protein–ligand interaction prediction

Lingling Zhao, Yan Li Zhu, Junjie Wang, Junjie Wang, Naifeng Wen, Chunyu Wang, Liang Cheng

Computational and Structural Biotechnology Journal

DOI

2022

Deep Learning–Based Classification of Epithelial–Mesenchymal Transition for Predicting Response to Therapy in Clear Cell Renal Cell Carcinoma

Qi-Wei Chen, Yue Kuai, Shu-Jing Wang, Xin-Qing Zhu, Hong-Yu Wang, Wenlong Liu, Liang Cheng, De-Yong Yang

Frontiers in Oncology

DOI

2021

A comprehensive review of the analysis and integration of omics data for SARS-CoV-2 and COVID-19

Zijun Zhu, Sainan Zhang, Ping Wang, Xinyu Chen, Jianxing Bi, Liang Cheng, Xue Zhang

Briefings in Bioinformatics

DOI

2021

Editorial: Omics Data Integration Towards Mining of Phenotype Specific Biomarkers in Cancers and Diseases

Liang Cheng, Lei Deng, Chuanxing Li, Yan Zhang

Frontiers in Cell and Developmental Biology

DOI

2021

SCovid: single-cell atlases for exposing molecular characteristics of COVID-19 across 10 human tissues

Changlu Qi, Chao Wang, Lingling Zhao, Zijun Zhu, Ping Wang, Sainan Zhang, Liang Cheng, Xue Zhang

Nucleic Acids Research

DOI

2021

gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites

Liang Cheng, Changlu Qi, Haixiu Yang, Minke Lu, Yiting Cai, Tongze Fu, Jialiang Ren, Qu Jin, Xue Zhang

Nucleic Acids Research

DOI

2021

A genome-wide cross-trait analysis highlights the shared genetic structure between COVID-19 and Alzheimer's disease

Shizheng Qiu, Yang Hu, Liang Cheng

Journal of Infection

DOI

2021

Integration of Multiple-Omics Data to Analyze the Population-Specific Differences for Coronary Artery Disease

Yang Hu, Shizheng Qiu, Liang Cheng

Computational and Mathematical Methods in Medicine

DOI

2021

Non-coding RNAs as Novel Biomarkers in Cancer Drug Resistance

Haixiu Yang, Changlu Qi, Boyan Li, Liang Cheng

Current Medicinal Chemistry

DOI

2021

Prioritizing Disease-Related Microbes Based on the Topological Properties of a Comprehensive Network

Haixiu Yang, Fan Tong, Changlu Qi, Ping Wang, Jiangyu Li, Liang Cheng

Frontiers in Microbiology

DOI

2021

Briefings in functional genomics special section editorial: analysis of integrated multiple omics data

Feifei Cui, Liang Cheng, Quan Zou

Briefings in Functional Genomics

DOI

2021

COVID-19 induces lower levels of IL-8, IL-10, and MCP-1 than other acute CRS-inducing diseases

Liang Cheng, Zijun Zhu, Chao Wang, Ping Wang, Yongqun Oliver He, Xue Zhang

Proceedings of the National Academy of Sciences

DOI

2021

Identification of Gene Signature Associated with Type 2 Diabetes Mellitus by Integrating Mutation and Expression Data

Liang Cheng, Zijun Zhu, Xudong Han

Current Gene Therapy

DOI

2021

Functional alterations caused by mutations reflect evolutionary trends of SARS-CoV-2

Liang Cheng, Xudong Han, Zijun Zhu, Changlu Qi, Ping Wang, Xue Zhang

Briefings in Bioinformatics

DOI

2021

Preface

Liang Cheng, Alfred S. Lewin

Current Gene Therapy

DOI

2021

SubtypeDrug: a software package for prioritization of candidate cancer subtype-specific drugs

Xudong Han, Qingfei Kong, Chonghui Liu, Liang Cheng, Junwei Han

Bioinformatics

DOI

2021

Analysis of Autophagy-Related Signatures in The Tumor Immune Microenvironment and Identification of Clinical Prognostic Markers in Bladder Carcinoma

Hui-Feng Cao, Da-Yin Chen, Zhi-Hui Zhang, Liang Cheng, Zhen-Guo Luo, Junjuan Yu

DOI

2021

A pyramidal deep learning pipeline for kidney whole-slide histology images classification

Hisham Abdeltawab, F. Khalifa, M. Ghazal, Liang Cheng, D. Gondim, A. El-Baz

Scientific Reports

DOI

2021

Author Correction: A pyramidal deep learning pipeline for kidney whole-slide histology images classification

Hisham Abdeltawab, F. Khalifa, M. Ghazal, Liang Cheng, D. Gondim, A. El-Baz

Scientific Reports

DOI

2021

Machine Learning Based Classification from Whole-Slide Histopathological Images Enables Reliable and Interpretable Diagnosis of Inverted Urothelial Papilloma

Wei Shao, Michael Cheng, Zhi Huang, Zhi Han, Tongxin Wang, A. López-Beltran, A. Osunkoya, J. Zhang, Liang Cheng, Kun Huang

Social Science Research Network

DOI

2020

A comprehensive review for gut microbes: technologies, interventions, metabolites and diseases

Changlu Qi, Ping Wang, Tongze Fu, Minke Lu, Yiting Cai, Xu Chen, Liang Cheng

Briefings in Functional Genomics

DOI

2020

CNA2Subpathway: identification of dysregulated subpathway driven by copy number alterations in cancer

Yuqi Sheng, Ying Jiang, Yang Yang, Xiangmei Li, Jiayue Qiu, Jiashuo Wu, Liang Cheng, Junwei Han

Briefings in Bioinformatics

DOI

2020

Editorial: System Biology Methods and Tools for Integrating Omics Data

Liang Cheng, Lei Deng, Mingxiang Teng

Frontiers in Genetics

DOI

2020

Conjoint Feature Representation of GO and Protein Sequence for PPI Prediction Based on an Inception RNN Attention Network

Lingling Zhao, Junjie Wang, Yang Hu, Liang Cheng

Molecular Therapy — Nucleic Acids

DOI

2020

Identification of a Multi–Long Noncoding RNA Signature for the Diagnosis of Type 1 Diabetes Mellitus

Guannan Geng, Zicheng Zhang, Liang Cheng

Frontiers in Bioengineering and Biotechnology

DOI

2020

gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions

Liang Cheng, Changlu Qi, He Zhuang, Tongze Fu, Xue Zhang

Nucleic Acids Research

DOI

2020

DeepLGP: a novel deep learning method for prioritizing lncRNA target genes

Tianyi Zhao, Yang Hu, Jiajie Peng, Liang Cheng

Bioinformatics

DOI

2020

MRTFB regulates the expression of NOMO1 in colon

Tianyi Zhao, Yang Hu, Tianyi Zang, Liang Cheng

Proceedings of the National Academy of Sciences

DOI

2020

A novel estimator of between-study variance in random-effects models

Nan Wang, Jun Zhang, L. Xu, Jing Qi, Beibei Liu, Yiyang Tang, Yinan Jiang, Liang Cheng, Qinghua Jiang, Xunbo Yin, Shuilin Jin

BMC Genomics

DOI

2020

Omics Data and Artificial Intelligence: New Challenges for Gene Therapy

Liang Cheng

Current Gene Therapy

DOI

2020

Identification of gene signature associated with type 2 diabetes mellitus by integrating mutation and expression data*

Zi-Jun Zhu, Xudong Han, Liang Cheng

IEEE International Conference on Bioinformatics and Biomedicine

DOI

2020

System Biology Methods and Tools for Pharmaceutical Design.

Liang Cheng

Current pharmaceutical design

DOI

2020

Deep-DRM: a computational method for identifying disease-related metabolites based on graph deep learning approaches

Tianyi Zhao, Yang Hu, Liang Cheng

Briefings Bioinform.

DOI

2020

Identifying the mRNAs associated with Bladder cancer recurrence

Hui-Feng Cao, Liang Cheng, Junjuan Yu, Zhi-Hui Zhang, Zhen-Guo Luo, Da-Yin Chen

Cancer Biomarkers

DOI

2020

Integrative Analysis of Pathological Images and Multi-Dimensional Genomic Data for Early-Stage Cancer Prognosis

Wei Shao, Kun Huang, Zhi Han, Jun Cheng, Liang Cheng, Tongxin Wang, Liang Sun, Zi-Xiao Lu, Jie Zhang, Dao-Qiang Zhang

IEEE Transactions on Medical Imaging

DOI

2020

Computational analysis of pathological images enables a better diagnosis of TFE3 Xp11.2 translocation renal cell carcinoma

Jun Cheng, Zhi Han, R. Mehra, Wei Shao, Michael Cheng, Qian-Jin Feng, Dong Ni, Kun Huang, Liang Cheng, Jie Zhang

Nature Communications

DOI

2020

A new survival model based on ferroptosis-related genes for prognostic prediction in clear cell renal cell carcinoma

Guang-Zhen Wu, Qi-Fei Wang, Ying-Kun Xu, Quanlin Li, Liang Cheng

Aging

DOI

2019

胃肠相关性急腹症合并感染性休克患者肠道菌群、肠黏膜屏障功能改变及临床意义分析

程亮，李林芝，李强

《中国医学前沿杂志(电子版)》

2019

psSubpathway: a software package for flexible identification of phenotype-specific subpathways in cancer progression

Junwei Han, Xudong Han, Qingfei Kong, Liang Cheng

Bioinformatics

DOI

2019

Peptide-Major Histocompatibility Complex Class I Binding Prediction Based on Deep Learning With Novel Feature

Tianyi Zhao, Liang Cheng, Tianyi Zang, Yang Hu

Frontiers in Genetics

DOI

2019

Computational and Biological Methods for Gene Therapy

Liang Cheng

Current Gene Therapy

DOI

2019

Analysis of Protein-Protein Interaction Networks through Computational Approaches

Ying Han, Liang Cheng, Weiju Sun

Protein and Peptide Letters

DOI

2019

Identifying Alzheimer’s disease-related proteins by LRRGD

Tianyi Zhao, Yang Hu, Tianyi Zang, Liang Cheng

BMC Bioinformatics

DOI

2019

Identification of anticancer peptides based on Random Relevance Vector Machines

Tianyi Zhao, Liang Cheng, Tianyi Zang, Yang Hu

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2019

The Assessment of Interleukin-18 on the Risk of Coronary Heart Disease

Weiju Sun, Ying Han, Shuo Yang, He Zhuang, Jingwen Zhang, Liang Cheng, Lu Fu

Medicinal Chemistry

DOI

2019

Computational Methods for Identifying Similar Diseases

Liang Cheng, Hengqiang Zhao, Pingping Wang, Wenyang Zhou, Meng Luo, Tianxin Li, Junwei Han, Shu‐Lin Liu, Qinghua Jiang

Molecular Therapy — Nucleic Acids

DOI

2019

A Mendelian Randomization Study on Infant Length and Type 2 Diabetes Mellitus Risk

He Zhuang, Ying Zhang, Shuo Yang, Liang Cheng, Shu‐Lin Liu

Current Gene Therapy

DOI

2019

Prioritization of candidate cancer drugs based on a drug functional similarity network constructed by integrating pathway activities and drug activities

Jieyi Di, Baotong Zheng, Qingfei Kong, Ying Jiang, Siyao Liu, Yang Yang, Xudong Han, Yuqi Sheng, Yunpeng Zhang, Liang Cheng, Junwei Han

Molecular Oncology

DOI

2019

Identification of a Combined RNA Prognostic Signature in Adenocarcinoma of the Lung

Si-Yu He, Wenjing Xi, Xin Wang, Chaohan Xu, Liang Cheng, Si-Yao Liu, Qianqian Meng, Boyan Li, Yahui Wang, Hongbo Shi, Hongjiu Wang, Zhenzhen Wang

Medical Science Monitor

DOI

2019

Identification of Cancer Dysfunctional Subpathways by Integrating DNA Methylation, Copy Number Variation, and Gene-Expression Data

Siyao Liu, Baotong Zheng, Yuqi Sheng, Qingfei Kong, Ying Jiang, Yang Yang, Xudong Han, Liang Cheng, Yunpeng Zhang, Junwei Han

Frontiers in Genetics

DOI

2019

Dysbiosis of the Gut Microbiome in Lung Cancer

He Zhuang, Liang Cheng, Yao Wang, Yukun Zhang, Man-Fei Zhao, Gong-Da Liang, Meng‐Chun Zhang, Yongguo Li, Jingbo Zhao, Yina Gao, Yujie Zhou, Shu‐Lin Liu

Frontiers in Cellular and Infection Microbiology

DOI

2019

A Positive Causal Influence of IL-18 Levels on the Risk of T2DM: A Mendelian Randomization Study

He Zhuang, Junwei Han, Liang Cheng, Shu‐Lin Liu

Frontiers in Genetics

DOI

2019

Corrigendum: Exposing the Causal Effect of C-Reactive Protein on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study

Liang Cheng, He Zhuang, Shuo Yang, Huijie Jiang, Song Wang, Jun Zhang

Frontiers in Genetics

DOI

2019

Exposing the Causal Effect of Body Mass Index on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study

Liang Cheng, He Zhuang, Hong Ju, Shuo Yang, Junwei Han, Renjie Tan, Yang Hu

Frontiers in Genetics

DOI

2019

Identification of Alzheimer's Disease-Related Genes Based on Data Integration Method

Yang Hu, Tianyi Zhao, Tianyi Zang, Ying Zhang, Liang Cheng

Frontiers in Genetics

DOI

2019

Sclerosing Adenosis, Genitourinary Tract

A. Cimadamore, Liang Cheng, R. Montironi

Encyclopedia of Pathology

DOI

2019

Another one in the chamber: cabozantinib for patients with metastatic non clear cell renal cell carcinoma.

V. di Nunno, F. Massari, V. Mollica, A. Cimadamore, M. Santoni, Liang Cheng, A. López-Beltran, M. Scarpelli, R. Montironi

Annals of Translational Medicine

DOI

2019

Predicting outcomes in non-muscle invasive (Ta/T1) bladder cancer: the role of molecular grade based on luminal/basal phenotype

J. Rebola, P. Aguiar, A. Blanca, R. Montironi, A. Cimadamore, Liang Cheng, Vanessa Henriques, Paula Lobato-Faria, A. López-Beltran

Virchows Archiv

DOI

2019

Immunotherapy in renal cell carcinoma from poverty to the spoiled of choice.

F. Massari, V. di Nunno, V. Mollica, R. Montironi, Liang Cheng, A. Cimadamore, A. Blanca, A. López-Beltran

Immunotherapy

DOI

2019

Novel Therapeutic Approaches and Targets Currently Under Evaluation for Renal Cell Carcinoma: Waiting for the Revolution

V. Mollica, V. di Nunno, Lidia Gatto, M. Santoni, A. Cimadamore, Liang Cheng, A. López-Beltran, R. Montironi, S. Pisconti, N. Battelli, F. Massari

Clinical drug investigation

DOI

2019

Digital versus light microscopy assessment of extraprostatic extension in radical prostatectomy samples

M. Volavšek, Vanessa Henriques, A. Blanca, R. Montironi, Liang Cheng, M. Raspollini, A. Cimadamore, N. Vau, F. Pierconti, A. López-Beltran

Virchows Archiv

DOI

2019

Prostatic Basal Cell Carcinoma

A. Cimadamore, Liang Cheng, R. Montironi

Encyclopedia of Pathology

DOI

2019

♂♀Ectopic Prostatic Tissue

M. Raspollini, R. Montironi, Liang Cheng, A. López-Beltran

Gynecologic and Urologic Pathology

DOI

2019

Low‐grade oncocytic tumour of kidney (CD117‐negative, cytokeratin 7‐positive): a distinct entity?

K. Trpkov, S. Williamson, Yuan Gao, P. Martínek, Liang Cheng, Ankur R. Sangoi, A. Yılmaz, Cheng Wang, P. Sanmiguel-Fraile, Delia M. Perez Montiel, S. Bulimbasic, J. Rogala, O. Hes

Histopathology

DOI

2019

Molecular characterization of testicular germ cell tumors: chasing the underlying pathways.

M. Chovanec, Liang Cheng

Future Oncology

DOI

2019

Papillary Renal Neoplasm With Reverse Polarity

Khaleel I. Al-Obaidy, J. Eble, Liang Cheng, S. Williamson, W. Sakr, N. Gupta, Muhammad T. Idrees, D. Grignon

American Journal of Surgical Pathology

DOI

2019

Prostatic Acinar Adenocarcinoma

A. Cimadamore, Silvia Gasparrini, A. López-Beltran, Liang Cheng, M. Scarpelli, M. Raspollini, R. Montironi

Encyclopedia of Pathology

DOI

2019

Contemporary best practice in the management of urothelial carcinomas of the renal pelvis and ureter

M. Bianconi, A. Cimadamore, L. Faloppi, M. Scartozzi, M. Santoni, A. López-Beltran, Liang Cheng, M. Scarpelli, R. Montironi

Therapeutic Advances in Urology

DOI

2019

Genitourinary Tumors: Update on Molecular Biomarkers for Diagnosis, Prognosis and Prediction of Response to Therapy.

A. Cimadamore, M. Scarpelli, M. Santoni, F. Massari, Francesca Tartari, R. Cerqueti, A. López-Beltran, Liang Cheng, R. Montironi

Current drug metabolism

DOI

2019

Primary Renal Synovial Sarcomas: PAX 8 Immunostaining and Unusual Molecular Findings

Laurel Rose, D. Grignon, Liang Cheng, Rong Fan, Shao-Bo Zhang, Fatimah I. Alruwaii, Shao-Xiong Chen

Applied immunohistochemistry & molecular morphology (Print)

DOI

2019

PD-L1 assessment in urothelial carcinoma: a practical approach.

M. Eckstein, A. Cimadamore, A. Hartmann, A. López-Beltran, Liang Cheng, M. Scarpelli, R. Montironi, T. Gevaert

Annals of Translational Medicine

DOI

2019

Targeted Treatment of Renal Cell Carcinoma

M. Santoni, A. Cimadamore, Liang Cheng, A. López-Beltran, M. Scarpelli, N. Battelli, R. Montironi

DOI

2019

Gonadoblastoma: origin and outcome.

L. Roth, Liang Cheng

Human Pathology

DOI

2019

Distinct mutational landscape of inverted urothelial papilloma

Mahmut Akgul, G. MacLennan, Liang Cheng

Journal of Pathology

DOI

2019

Histopathologic challenges: The second OPINION issue.

A. López-Beltran, R. Canas-Marques, Liang Cheng, R. Montironi

European Journal of Surgical Oncology

DOI

2019

Expression of miR‐100 and miR‐138 as prognostic biomarkers in non‐muscle‐invasive bladder cancer

A. Blanca, Á. Sánchez-González, Maria J. Requena, J. Carrasco Valiente, E. Gómez-Gómez, Liang Cheng, A. Cimadamore, R. Montironi, A. López-Beltran

Acta Pathologica, Microbiologica et Immunologica Scandinavica (APMIS)

DOI

2019

♂♀ Clear Cell Tumors of the Kidney and the Gynecologic Tract

M. Raspollini, Liang Cheng, R. Montironi, A. López-Beltran

Gynecologic and Urologic Pathology

DOI

2019

Prostate Cancer Grading: Are We Heading Towards Grade Grouping Version 2?

R. Montironi, Liang Cheng, A. Cimadamore, A. López-Beltran

European Urology

DOI

2019

Molecular characterization and diagnostic criteria of renal cell carcinoma with emphasis on liquid biopsies

A. Cimadamore, F. Massari, M. Santoni, V. Mollica, V. di Nunno, Liang Cheng, A. López-Beltran, M. Scarpelli, R. Montironi, H. Moch

Expert Review of Molecular Diagnostics

DOI

2019

Validation of a neuroendocrine-like classifier confirms poor outcomes in patients with bladder cancer treated with cisplatin-based neoadjuvant chemotherapy.

P. Grivas, T. Bismar, A. Alva, H. Huang, Yang Liu, R. Seiler, N. Alimohamed, Liang Cheng, M. Hyndman, B. Dabbas, Peter C. Black, E. Davicioni, Jonathan L. Wright, M. Ornstein, O. Mian, Hristos Z. Kaimakliotis, E. Gibb, Y. Lotan

Urologic oncology

DOI

2019

♂♀Secondary Tumors of the Male and Female Genital Tracts and Urinary Tract: Similarities and Differences

M. Raspollini, R. Canas-Marques, R. Montironi, Liang Cheng, A. López-Beltran

Gynecologic and Urologic Pathology

DOI

2019

Recurrent KRAS mutations in papillary renal neoplasm with reverse polarity

Khaleel I. Al-Obaidy, J. Eble, M. Nassiri, Liang Cheng, Mohammad K. Eldomery, S. Williamson, W. Sakr, N. Gupta, O. Hassan, Muhammad T. Idrees, D. Grignon

Modern Pathology

DOI

2019

♂The Prostatic Utricle and Endometrioid Prostate Cancer

R. Montironi, A. Cimadamore, R. Mazzucchelli, Silvia Gasparrini, A. Galosi, M. Raspollini, A. López-Beltran, Liang Cheng, M. Scarpelli

Gynecologic and Urologic Pathology

DOI

2019

Staging and Reporting of Renal Cell Carcinomas

A. López-Beltran, M. Raspollini, Liang Cheng, M. Scarpelli, A. Cimadamore, M. Santoni, Silvia Gasparrini, R. Montironi

DOI

2019

Micropapillary urothelial carcinoma of urinary bladder displays immunophenotypic features of luminal and p53-like subtypes and is not a variant of adenocarcinoma.

Yu Yang, Hristos Z. Kaimakliotis, S. Williamson, M. Koch, Kun Huang, M. Barboza, Shao-Bo Zhang, Ming-Sheng Wang, Muhammad T. Idrees, D. Grignon, J. Eble, L. Baldridge, Liang Cheng

Urologic oncology

DOI

2019

♂♀Clear Cell Carcinoma of the Urinary Tract vs. Clear Cell Carcinoma of the Ovary: Similarities and Differences

David S. Priemer, R. Emerson, A. López-Beltran, R. Montironi, S. Williamson, Maria Rosaria Raspollini, Liang Cheng

Gynecologic and Urologic Pathology

DOI

2019

Renal cell carcinoma staging: pitfalls, challenges, and updates

S. Williamson, Kanika Taneja, Liang Cheng

Histopathology

DOI

2019

♂♀ Müllerian Lesions of the Bladder: Endometriosis, Endosalpingiosis, Endocervicosis, and Müllerianosis

M. Raspollini, R. Montironi, Liang Cheng, A. López-Beltran

Gynecologic and Urologic Pathology

DOI

2019

Real-World Data on Cabozantinib in Previously Treated Patients with Metastatic Renal Cell Carcinoma: Focus on Sequences and Prognostic Factors

M. Santoni, D. Heng, S. Bracarda, G. Procopio, M. Milella, C. Porta, M. Matrana, G. Cartenì, S. Crabb, U. de Giorgi, U. Basso, C. Masini, F. Calabrò, M. Vitale, D. Santini, F. Massari, L. Galli, G. Fornarini, R. Ricotta, S. Buti, P. Zucali, O. Caffo, F. Morelli, F. Carrozza, A. Martignetti, A. Gelibter, R. Iacovelli, A. Mosca, F. Atzori, N. Vau, L. Incorvaia, C. Ortega, M. Scarpelli, A. López-Beltran, Liang Cheng, V. Paolucci, J. Graham, Erin Pierce, S. Scagliarini, P. Sepe, E. Verzoni, S. Merler, M. Rizzo, G. Sorgentoni, A. Conti, F. Piva, A. Cimadamore, R. Montironi, N. Battelli

Cancers

DOI

2019

Urinary Tract Pure Squamous Cell Carcinoma

M. Raspollini, Liang Cheng, A. López-Beltran

Encyclopedia of Pathology

DOI

2019

Clinicopathological characteristics of ypT0N0 urothelial carcinoma following neoadjuvant chemotherapy and cystectomy

M. Magers, Hristos Z. Kaimakliotis, M. Barboza, Elhaam H. Bandali, N. Adra, M. Koch, Liang Cheng

Journal of Clinical Pathology

DOI

2018

Exposing the Causal Effect of C-Reactive Protein on the Risk of Type 2 Diabetes Mellitus: A Mendelian Randomization Study

Liang Cheng, He Zhuang, Shuo Yang, Huijie Jiang, Song Wang, Jun Zhang

Frontiers in Genetics

DOI

2018

A Novel Method for Identifying Alzheimer’s Disease-related Proteins

Yang Hu, Jun Zhang, Tianyi Zhao, Liang Cheng, Tianyi Zang

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2018

LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse

Liang Cheng, Pingping Wang, Rui Tian, Song Wang, Qinghua Guo, Meng Luo, Wenyang Zhou, Guiyou Liu, Huijie Jiang, Qinghua Jiang

Nucleic Acids Research

DOI

2018

Systematic identification and analysis of dysregulated mi RNA and transcription factor feed‐forward loops in hypertrophic cardiomyopathy

Hongbo Shi, Jiayao Li, Qiong Song, Liang Cheng, Haoran Sun, Wenjing Fan, Jianfei Li, Zhenzhen Wang, Guangde Zhang

Journal of Cellular and Molecular Medicine

DOI

2018

Human Disease System Biology.

Liang Cheng, Yang Hu

Current Gene Therapy

DOI

2018

A Review of Recent Advances and Research on Drug Target Identification Methods

Yang Hu, Tianyi Zhao, Ningyi Zhang, Ying Zhang, Liang Cheng

Current Drug Metabolism

DOI

2018

Identifying diseases-related metabolites using random walk

Yang Hu, Tianyi Zhao, Ningyi Zhang, Tianyi Zang, Jun Zhang, Liang Cheng

BMC Bioinformatics

DOI

2018

DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function

Liang Cheng, Yang Hu, Jie Sun, Meng Zhou, Qinghua Jiang

Bioinformatics

DOI

2018

InfAcrOnt: calculating cross-ontology term similarities using information flow by a random walk

Liang Cheng, Yue Jiang, Hong Ju, Jie Sun, Jiajie Peng, Meng Zhou, Yang Hu

BMC Genomics

DOI

2018

Adjuvant and neoadjuvant approaches for urothelial cancer: Updated indications and controversies.

F. Massari, M. Santoni, V. di Nunno, Liang Cheng, A. López-Beltran, A. Cimadamore, Silvia Gasparrini, M. Scarpelli, N. Battelli, R. Montironi

Cancer Treatment Reviews

DOI

2018

An ovulating follicle presenting as a testicular mass in a teenage patient with ovotesticular DSD

J. Roth, Nadine G. Haddad, Eric A. Albright, Liang Cheng, R. Rink, M. Kaefer

Urology Case Reports

DOI

2018

Inherited forms of bladder cancer: a review of Lynch syndrome and other inherited conditions.

A. Phelan, A. López-Beltran, R. Montironi, Shao-Bo Zhang, M. Raspollini, M. Cheng, Hristos Z. Kaimakliotis, M. Koch, Liang Cheng

Future Oncology

DOI

2018

Emerging Prognostic Biomarkers in Testicular Germ Cell Tumors: Looking Beyond Established Practice

M. Chovanec, C. Albany, M. Mego, R. Montironi, A. Cimadamore, Liang Cheng

Frontiers in Oncology

DOI

2018

Emerging Molecular Technologies in Renal Cell Carcinoma: Liquid Biopsy

A. Cimadamore, Silvia Gasparrini, F. Massari, M. Santoni, Liang Cheng, A. López-Beltran, M. Scarpelli, R. Montironi

Cancers

DOI

2018

Protein expression of the transcription factors DMRT1, TCLF5, and OCT4 in selected germ cell neoplasms of the testis.

L. Roth, Michael Michal, Michael Michal, Liang Cheng

Human Pathology

DOI

2018

Unclassified hemangioma-like renal cell carcinoma: a potential diagnostic pitfall.

Kanika Taneja, S. Arora, C. Rogers, N. Gupta, Liang Cheng, S. Williamson

Human Pathology

DOI

2018

Immunohistochemical characteristics of renomedullary interstitial cell tumor: a study of 41 tumors with emphasis on differential diagnosis of mesenchymal neoplasms.

Zhichun Lu, Khaleel I. Al-Obaidy, Liang Cheng, K. Perry, D. Grignon, S. Williamson

Human Pathology

DOI

2018

Next-Generation Sequencing to Detect Deletion of RB1 and ERBB4 Genes in Chromophobe Renal Cell Carcinoma: A Potential Role in Distinguishing Chromophobe Renal Cell Carcinoma from Renal Oncocytoma.

Qingqing Liu, K. Cornejo, Liang Cheng, L. Hutchinson, Ming-Sheng Wang, Shao-Bo Zhang, K. Tomaszewicz, E. Cosar, B. Woda, Zhong Jiang

American Journal of Pathology

DOI

2018

The Identification of Immunological Biomarkers in Kidney Cancers

A. López-Beltran, Vanessa Henriques, A. Cimadamore, M. Santoni, Liang Cheng, T. Gevaert, A. Blanca, F. Massari, M. Scarpelli, R. Montironi

Frontiers in Oncology

DOI

2018

Re: Isabel Rauscher, Charlotte Düwel, Bernhard Haller, et al. Efficacy, Predictive Factors, and Prediction Nomograms for 68Ga-labeled Prostate-specific Membrane Antigen-ligand Positron-emission Tomography/Computed Tomography in Early Biochemical Recurrent Prostate Cancer After Radical Prostatectomy.

A. Cimadamore, M. Scarpelli, Liang Cheng, A. López-Beltran, F. Montorsi, R. Montironi

European Urology

DOI

2018

Genetic Mutations Associated with Histopathology Changes in Kidney Cancer

Jun Cheng, Zhi Han, Qian-Jin Feng, Liang Cheng, Jie Zhang, Kun Huang

American Medical Informatics Association Annual Symposium

2018

Intratumoural heterogeneity may hinder precision medicine strategies in patients with clear cell renal cell carcinoma

M. Raspollini, I. Montagnani, R. Montironi, F. Castiglione, G. Martignoni, Liang Cheng, A. López-Beltran

Journal of Clinical Pathology

DOI

2018

Immunotherapy in renal cell carcinoma: latest evidence and clinical implications

M. Santoni, F. Massari, V. di Nunno, A. Conti, A. Cimadamore, M. Scarpelli, R. Montironi, Liang Cheng, N. Battelli, A. López-Beltran

Drugs in Context

DOI

2018

Precision cancer diagnostics: new insights, opportunities and challenges

Liang Cheng

2018

Upper urinary tract urothelial carcinoma and its variants: transition from morphology to personalized molecular characterization in diagnosis, prognosis, and therapy

A. Cimadamore, M. Scarpelli, M. Santoni, Liang Cheng, A. López-Beltran, R. Montironi

Expert Review of Molecular Diagnostics

DOI

2018

The molecular characterization and therapeutic strategies of papillary renal cell carcinoma

Qi-Wei Chen, Liang Cheng, Quanlin Li

Expert Review of Anticancer Therapy

DOI

2018

Prostate cancer with cribriform morphology: diagnosis, aggressiveness, molecular pathology and possible relationships with intraductal carcinoma

R. Montironi, A. Cimadamore, Silvia Gasparrini, R. Mazzucchelli, M. Santoni, F. Massari, Liang Cheng, A. López-Beltran, M. Scarpelli

Expert Review of Anticancer Therapy

DOI

2018

Morphological spectrum of renal cell carcinoma, unclassified: an analysis of 136 cases

Carmen M. Perrino, D. Grignon, S. Williamson, Muhammad T. Idrees, J. Eble, Liang Cheng

Histopathology

DOI

2018

Iatrogenic pathology of the urinary bladder.

A. López-Beltran, R. Montironi, M. Raspollini, Liang Cheng, G. Netto

Seminars in diagnostic pathology

DOI

2018

Prostate cancer grading in 2018: limitations, implementations, cribriform morphology, and biological markers

R. Montironi, A. Cimadamore, Liang Cheng, A. López-Beltran, M. Scarpelli

International Journal of Biological Markers

DOI

2018

Variants and new entities of bladder cancer

A. López-Beltran, Vanessa Henriques, R. Montironi, A. Cimadamore, M. Raspollini, Liang Cheng

Histopathology

DOI

2018

Survival outcomes in plasmacytoid urothelial carcinoma: Results with contemporary systemic therapy.

N. Hashemi-Sadraei, Carmen M. Perrino, M. Monn, Elhaam H. Bandali, Liang Cheng, Muhammad T. Idrees, R. Bihrle, M. Koch, J. Eble, Chia‐Sui Kao, N. Adra, R. Pili, D. Grignon, Hristos Z. Kaimakliotis, C. Albany

DOI

2018

92 Fumarate Hydratase-Deficient Renal Cell Carcinoma: Aspiration and Effusion Cytologic Features

Irene Shyu, Xiaoyan Wang, Valentina Robila, R. Mehra, J. Mchugh, Ying-Bei Chen, A. Udager, A. Gill, Liang Cheng, M. Amin, S. Smith

DOI

2018

Exploring Small Extracellular Vesicles for Precision Medicine in Prostate Cancer

M. Giulietti, M. Santoni, A. Cimadamore, F. Carrozza, F. Piva, Liang Cheng, A. López-Beltran, M. Scarpelli, N. Battelli, R. Montironi

Frontiers in Oncology

DOI

2018

Detection of androgen receptor (AR) and AR-V7 in small cell prostate carcinoma: Diagnostic and therapeutic implications

P. Zhao, Yezi Zhu, Liang Cheng, Jun Luo

Asian Journal of Urology

DOI

2018

Annual review issue

Liang Cheng, D. Berney

Histopathology

DOI

2018

Testicular cancer

Liang Cheng, P. Albers, D. Berney, D. Feldman, G. Daugaard, T. Gilligan, L. Looijenga

Nature Reviews Disease Primers

DOI

2018

Quick steps toward precision medicine in renal cell carcinoma

F. Massari, M. Santoni, V. di Nunno, A. Cimadamore, N. Battelli, M. Scarpelli, M. Cheng, A. López-Beltran, Liang Cheng, R. Montironi

Expert Review of Precision Medicine and Drug Development

DOI

2018

Digital versus light microscopy assessment of surgical margin status after radical prostatectomy

M. Volavšek, A. Blanca, R. Montironi, Liang Cheng, M. Raspollini, N. Vau, J. Fonseca, F. Pierconti, A. López-Beltran

Virchows Archiv

DOI

2018

Pathology of the Prostate: An Algorithmic Approach

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2018

Micropapillary urothelial carcinoma: evaluation of HER2 status and immunohistochemical characterization of the molecular subtype.

Ulrike Zinnall, V. Weyerer, E. Compérat, P. Camparo, N. Gaisa, R. Knuechel-Clarke, A. Perren, A. Lugli, M. Toma, G. Baretton, G. Kristiansen, R. Wirtz, Liang Cheng, B. Wullich, R. Stoehr, A. Hartmann, S. Bertz

Human Pathology

DOI

2018

Re: A Novel Tool for Predicting Extracapsular Extension During Graded Partial Nerve Sparing in Radical Prostatectomy.

R. Montironi, Liang Cheng, A. López-Beltran, M. Scarpelli, F. Montorsi

European Urology

DOI

2018

Plasmacytoid urothelial carcinoma: A clinicopathological study.

N. Hashemi-Sadraei, Carmen M. Perrino, M. Monn, Elhaam H. Bandali, Liang Cheng, Muhammad T. Idrees, R. Bihrle, M. Koch, J. Eble, Chia‐Sui Kao, C. Albany, R. Pili, D. Grignon, Hristos Z. Kaimakliotis

DOI

2018

Classical gonadoblastoma: its relationship to the ‘dissecting’ variant and undifferentiated gonadal tissue

L. Roth, Liang Cheng

Histopathology

DOI

2018

Abstract 2640: Detection of androgen receptor (AR) and AR-V7 in small cell prostate carcinoma by immunohistochemistry

P. Zhao, Yezi Zhu, Liang Cheng, Jun Luo

Clinical research

DOI

2018

Emerging immunotherapeutic strategies targeting telomerases in genitourinary tumors.

F. Carrozza, M. Santoni, F. Piva, Liang Cheng, A. López-Beltran, M. Scarpelli, R. Montironi, N. Battelli, S. Tamberi

Critical reviews in oncology/hematology

DOI

2018

Biological issues with cabozantinib in bone metastatic renal cell carcinoma and castration-resistant prostate cancer.

V. di Nunno, A. Cimadamore, M. Santoni, M. Scarpelli, M. Fiorentino, C. Ciccarese, R. Iacovelli, Liang Cheng, A. López-Beltran, F. Massari, R. Montironi

Future Oncology

DOI

2018

Reappraisal of Morphological Differences between Renal Medullary Carcinoma, Collecting Duct Carcinoma, and Fumarate Hydratase-Deficient Renal Cell Carcinoma

C. Ohe, S. Smith, Deepika Sirohi, M. Divatia, M. D. de Peralta-Venturina, G. Paner, A. Agaimy, Mitual B. Amin, P. Argani, Ying-Bei Chen, Liang Cheng, M. Colecchia, E. Compérat, I. da Cunha, J. Epstein, A. Gill, O. Hes, M. Hirsch, W. Jochum, L. Kunju, F. Maclean, C. Magi-Galluzzi, J. McKenney, R. Mehra, G. Nesi, A. Osunkoya, M. Picken, P. Rao, V. Reuter, P. G. de Oliveira Salles, L. Schultz, S. Tickoo, S. Tomlins, K. Trpkov, Mahul B. Amin

American Journal of Surgical Pathology

DOI

2018

Clues to Recognition of Fumarate Hydratase-Deficient Renal Cell Carcinoma: Findings From Cytologic and Limited Biopsy Samples

Irene Shyu, L. Mirsadraei, Xiaoyan Wang, Valentina Robila, R. Mehra, J. Mchugh, Ying-Bei Chen, A. Udager, A. Gill, Liang Cheng, M. Amin, O. Lin, S. Smith

Cancer Cytopathology

DOI

2018

Editorial: Emerging Biomarkers in Genitourinary Tumors.

R. Montironi, A. López-Beltran, Liang Cheng

Current drug metabolism

DOI

2018

Challenges in Pathologic Staging of Renal Cell Carcinoma: A Study of Interobserver Variability Among Urologic Pathologists

S. Williamson, P. Rao, O. Hes, J. Epstein, S. Smith, M. Picken, Ming Zhou, M. Tretiakova, S. Tickoo, Ying-Bei Chen, V. Reuter, S. Fleming, F. Maclean, N. Gupta, N. Kuroda, B. Delahunt, R. Mehra, C. Przybycin, Liang Cheng, J. Eble, D. Grignon, H. Moch, J. López, L. Kunju, P. Tamboli, J. Srigley, M. Amin, G. Martignoni, M. Hirsch, S. Bonsib, K. Trpkov

American Journal of Surgical Pathology

DOI

2018

Recent Advances in Liquid Biopsy in Patients With Castration Resistant Prostate Cancer

V. di Nunno, Lidia Gatto, M. Santoni, A. Cimadamore, A. López-Beltran, Liang Cheng, M. Scarpelli, R. Montironi, F. Massari

Frontiers in Oncology

DOI

2018

Biomarkers of aggressiveness in genitourinary tumors with emphasis on kidney, bladder, and prostate cancer

A. Cimadamore, Silvia Gasparrini, M. Santoni, Liang Cheng, A. López-Beltran, N. Battelli, F. Massari, F. Giunchi, M. Fiorentino, M. Scarpelli, R. Montironi

Expert Review of Molecular Diagnostics

DOI

2018

Staging of bladder cancer

M. Magers, A. López-Beltran, R. Montironi, S. Williamson, Hristos Z. Kaimakliotis, Liang Cheng

Histopathology

DOI

2017

Measuring disease similarity and predicting disease-related ncRNAs by a novel method

Yang Hu, Meng Zhou, Hongbo Shi, Hong Ju, Qinghua Jiang, Liang Cheng

BMC Medical Genomics

DOI

2017

Identifying diseases-related metabolites based on network

Lingling Zhao, Tianyi Zhao, Yang Hu, Liang Cheng

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2017

Human Disease-Protein Network

Yangmei Cheng, Hao Zhang, Hui Zheng, Jun Zhang, Yang Hu, Liang Cheng

Current Proteomics

DOI

2017

A framework for exploring associations between biomedical terms in PubMed

Haixiu Yang, Lingling Zhao, Ying Zhang, Hong Ju, Dong Wang, Yang Hu, Jun Zhang, Liang Cheng

Oncotarget

DOI

2017

DisSetSim: an online system for calculating similarity between disease sets

Yang Hu, Lingling Zhao, Zhiyan Liu, Hong Ju, Hongbo Shi, Peigang Xu, Yadong Wang, Liang Cheng

Journal of Biomedical Semantics

DOI

2017

A novel method to identify pre-microRNA in various species knowledge base on various species

Tianyi Zhao, Ningyi Zhang, Ying Zhang, Jun P. Ren, Peigang Xu, Zhiyan Liu, Liang Cheng, Yang Hu

Journal of Biomedical Semantics

DOI

2017

Autoimmune disease variants regulate GSDMB gene expression in human immune cells and whole blood

Yang Hu, Shuilin Jin, Liang Cheng, Guiyou Liu, Qinghua Jiang

Proceedings of the National Academy of Sciences

DOI

2017

MetSigDis: a manually curated resource for the metabolic signatures of diseases

Liang Cheng, Haixiu Yang, Hengqiang Zhao, Xiaoya Pei, Hongbo Shi, Jie Sun, Yunpeng Zhang, Zhenzhen Wang, Meng Zhou

Briefings in Bioinformatics

DOI

2017

An Immune-Related Six-lncRNA Signature to Improve Prognosis Prediction of Glioblastoma Multiforme

Meng Zhou, Zhaoyue Zhang, Hengqiang Zhao, Siqi Bao, Liang Cheng, Jie Sun

Molecular Neurobiology

DOI

2017

Prognostic and clinicopathological role of long non-coding RNA UCA1 in various carcinomas

Xiaoxiong Wang, Fei Peng, Liang Cheng, Guang Yang, Daming Zhang, Jiaqi Liu, Xin Chen, Shiguang Zhao

Oncotarget

DOI

2017

Estrogen deficiency is associated with hippocampal morphological remodeling of early postmenopausal mice

Yan Yan, Liang Cheng, Xin Chen, Qin Wang, Ming-Jing Duan, Jichao Ma, Linjing Zhao, Xuemei Jiang, Jing Ai

Oncotarget

DOI

2017

Discovery and validation of immune-associated long non-coding RNA biomarkers associated with clinically molecular subtype and prognosis in diffuse large B cell lymphoma

Meng Zhou, Hengqiang Zhao, Wanying Xu, Siqi Bao, Liang Cheng, Jie Sun

Molecular Cancer

DOI

2017

Predicting disease-related genes using integrated biomedical networks

Jiajie Peng, Kun Bai, Xuequn Shang, Guohua Wang, Hansheng Xue, Shuilin Jin, Liang Cheng, Yadong Wang, Jin Chen

BMC Genomics

DOI

2017

Rs4878104 contributes to Alzheimer’s disease risk and regulates DAPK1 gene expression

Yang Hu, Liang Cheng, Ying Zhang, Weiyang Bai, Wen-Yang Zhou, Tao Wang, Zhi-fa Han, Jian Zong, Shuilin Jin, Jun Zhang, Qinghua Jiang, Guiyou Liu

Neurological Sciences

DOI

2017

GAB2 rs2373115 variant contributes to Alzheimer's disease risk specifically in European population.

Yang Hu, Li-Kun Zheng, Liang Cheng, Ying Zhang, Weiyang Bai, Wen-Yang Zhou, Tao Wang, Zhi-fa Han, Jian Zong, Shuilin Jin, Jun Zhang, Guiyou Liu, Qinghua Jiang

Journal of Neurological Sciences

DOI

2017

Morphologic, Immunohistochemical and Molecular Analyses of a Huge Clear Cell Papillary Renal Cell Carcinoma

M. Raspollini, I. Montagnani, F. Castiglione, Liang Cheng, R. Montironi, A. López-Beltran

DOI

2017

Fluorescence in situ hybridization in surgical pathology: principles and applications

Liang Cheng, Shao-Bo Zhang, Lisha Wang, G. MacLennan, D. Davidson

The Journal of Pathology: Clinical Research

DOI

2017

Oligometastases in Genitourinary Tumors: Recent Insights and Future Molecular Diagnostic Approach

A. Conti, C. D'Elia, M. Cheng, M. Santoni, F. Piva, M. Brunelli, A. López-Beltran, M. Giulietti, M. Scarpelli, A. Pycha, A. Galosi, W. Artibani, Liang Cheng, R. Montironi, N. Battelli, L. Lusuardi

DOI

2017

Primary Choriocarcinoma of the Bladder: A Case Report and Review of Literature

Francesca M. Monn, Kaitlin R. Jaqua, R. Bihrle, Liang Cheng

Clinical Genitourinary Cancer

DOI

2017

Testicular cancer: The usage of central review for pathology diagnosis of orchiectomy specimens.

Saul E Harari, D. Sassoon, David S. Priemer, J. Jacob, J. Eble, A. Caliò, D. Grignon, Mohammed Idrees, C. Albany, T. Masterson, N. Hanna, R. Foster, T. Ulbright, L. Einhorn, Liang Cheng

Urologic oncology

DOI

2017

Inflammatory and Tumor-like Conditions of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Perspectives on testicular germ cell neoplasms.

Liang Cheng, Bingjian Lyu, L. Roth

Human Pathology

DOI

2017

Long Non-coding RNAs in Prostate Cancer with Emphasis on Second Chromosome Locus Associated with Prostate-1 Expression

A. Cimadamore, Silvia Gasparrini, R. Mazzucchelli, A. Doria, Liang Cheng, A. López-Beltran, M. Santoni, M. Scarpelli, R. Montironi

Frontiers in Oncology

DOI

2017

Activity and Functions of Tumor-associated Macrophages in Prostate Carcinogenesis

M. Santoni, Liang Cheng, A. Conti, C. Mariani, A. López-Beltran, R. Montironi, N. Battelli

DOI

2017

Pathology of renal cancer and other tumours affecting the kidney

A. López-Beltran, R. Montironi, Liang Cheng

DOI

2017

Variants and Variations in Epithelial Renal Cell Tumors in Adults: The Pathologist's Point of View

R. Montironi, Silvia Gasparrini, A. Cimadamore, R. Mazzucchelli, F. Massari, Liang Cheng, A. López-Beltran, H. Moch, F. Montorsi, M. Scarpelli

DOI

2017

Unclassified Renal Cell Carcinoma With Significant Response to Nivolumab

N. Adra, Liang Cheng, R. Pili

Clinical Genitourinary Cancer

DOI

2017

Validation of 34betaE12 immunoexpression in clear cell papillary renal cell carcinoma as a sensitive biomarker.

G. Martignoni, M. Brunelli, D. Segala, Enrico Munari, S. Gobbo, Luca Cima, I. Borze, Tina Wirtanen, V. Sarhadi, L. Atanesyan, S. Savola, L. Barzon, G. Masi, M. Fassan, J. Eble, T. Bohling, Liang Cheng, B. Delahunt, S. Knuutila

Pathology (Sydney)

DOI

2017

Histologic Subtypes of Prostatic Carcinoma

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Pathologic Prognostic Factors of Prostate Cancer

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Re: Umberto Leone Roberti Maggiore, Simone Ferrero, Massimo Candiani, et al. Bladder Endometriosis: A Systematic Review of Pathogenesis, Diagnosis, Treatment, Impact on Fertility, and Risk of Malignant Transformation. Eur Urol 2017;71:790-807.

R. Montironi, Silvia Gasparrini, A. López-Beltran, Liang Cheng, F. Massari, F. Montorsi, M. Scarpelli

European Urology

DOI

2017

Update on histopathological evaluation of lymphadenectomy specimens from prostate cancer patients

A. Conti, M. Santoni, L. Burattini, M. Scarpelli, R. Mazzucchelli, A. Galosi, Liang Cheng, A. López-Beltran, A. Briganti, F. Montorsi, R. Montironi

World journal of urology

DOI

2017

Contemporary grading of prostate cancer: 2017 update for pathologists and clinicians

Silvia Gasparrini, A. Cimadamore, M. Scarpelli, F. Massari, A. Doria, R. Mazzucchelli, Liang Cheng, A. López-Beltran, R. Montironi

Asian Journal of Andrology

DOI

2017

Predicting the biological behavior of non-muscle-invasive bladder cancer: from histology to molecular taxonomy

C. Luchini, Liang Cheng

Translational Andrology and Urology

DOI

2017

The Seminal Vesicles and Ejaculatory Ducts

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Pathology of the Prostate after Treatment

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Small-cell Carcinomas of the Urinary Bladder and Prostate: TERT Promoter Mutation Status Differentiates Sites of Malignancy and Provides Evidence of Common Clonality Between Small-cell Carcinoma of the Urinary Bladder and Urothelial Carcinoma.

David S. Priemer, Ming-Sheng Wang, Shao-Bo Zhang, A. López-Beltran, E. Kouba, R. Montironi, D. Davidson, G. MacLennan, Lisha Wang, A. Osunkoya, You-Ping Deng, R. Emerson, Liang Cheng

European Urology Focus

DOI

2017

Lymphoepithelioma-like carcinoma of the upper urinary tract

A. López-Beltran, G. Paner, A. Blanca, R. Montironi, T. Tsuzuki, Y. Nagashima, Shih-Sung Chuang, K. Win, L. Madruga, M. Raspollini, Liang Cheng

Virchows Archiv

DOI

2017

A contemporary series of renal masses with emphasis on recently recognized entities and tumors of low malignant potential: A report based on 624 consecutive tumors from a single tertiary center.

M. Raspollini, I. Montagnani, R. Montironi, Liang Cheng, G. Martignoni, A. Minervini, S. Serni, G. Nicita, M. Carini, A. López-Beltran

Pathology, Research and Practice

DOI

2017

Re: Daniel M. Geynisman. Anti-programmed cell death protein 1 (PD-1) antibody nivolumab leads to a dramatic and rapid response in papillary renal cell carcinoma with sarcomatoid and rhabdoid features. Eur Urol 2015;68:912-4.

M. Monn, Liang Cheng, M. Scarpelli, A. López-Beltran, R. Montironi

European Urology

DOI

2017

Neuroendocrine Tumors of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

RE: Jürgen Görtler, Klaus Kayser, Stephan Borkenfeld, Rita Carvalho, Gian Kayser. Cognitive Algorithms and Digitized Tissue-based Diagnosis. Diagnostic Pathology 2017, 3:248

R. Montironi, Silvia Gasparrini, M. A. Montironi, A. Cimadamore, A. López-Beltran, Liang Cheng, M. Scarpelli

DOI

2017

Morphologic Variants of Epithelial and Neuroendocrine Tumors of the Prostate. The Pathologist's Point of View

R. Montironi, Silvia Gasparrini, A. Cimadamore, R. Mazzucchelli, F. Massari, Liang Cheng, A. López-Beltran, A. Briganti, M. Scarpelli

DOI

2017

Gleason Grading of Prostate Cancer

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Preneoplastic Lesions and Conditions of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Practical Immunohistochemistry of Prostate Cancer and Related Lesions

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Renal cell carcinoma with angioleiomyoma-like stroma and clear cell papillary renal cell carcinoma: exploring SDHB protein immunohistochemistry and the relationship to tuberous sclerosis complex.

S. Williamson, J. Hornick, J. Eble, N. Gupta, C. Rogers, L. True, D. Grignon, Liang Cheng

Human Pathology

DOI

2017

Diagnostic criteria for oncocytic renal neoplasms: a survey of urologic pathologists.

S. Williamson, R. Gadde, K. Trpkov, M. Hirsch, J. Srigley, V. Reuter, Liang Cheng, L. Kunju, R. Barod, C. Rogers, B. Delahunt, O. Hes, J. Eble, Ming Zhou, J. McKenney, G. Martignoni, S. Fleming, D. Grignon, H. Moch, N. Gupta

Human Pathology

DOI

2017

Rare Forms of Prostatic Carcinomas

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Renal Cell Carcinoma With Chromosome 6p Amplification Including the TFEB Gene: A Novel Mechanism of Tumor Pathogenesis?

S. Williamson, D. Grignon, Liang Cheng, L. Favazza, D. Gondim, Shannon Carskadon, N. Gupta, D. Chitale, S. Kalyana-Sundaram, N. Palanisamy

American Journal of Surgical Pathology

DOI

2017

Prostate Cancer Biomarkers: Current Status.

K. Hodges, Emily Bachert, Liang Cheng

Critical reviews in oncogenesis

DOI

2017

TERT Promoter Mutations Occur Frequently in Urothelial Papilloma and Papillary Urothelial Neoplasm of Low Malignant Potential.

Liang Cheng, R. Montironi, A. López-Beltran

European Urology

DOI

2017

TMPRSS2-ERG Fusion in an Uncommon Presentation of Prostate Cancer.

N. Adra, Liang Cheng, N. Hanna, G. Durm

Clinical Genitourinary Cancer

DOI

2017

Mirna Expression in Bladder Cancer and Their Potential Role in Clinical Practice.

A. Blanca, Liang Cheng, R. Montironi, H. Moch, F. Massari, M. Fiorentino, M. Raspollini, M. Scarpelli, A. López-Beltran

Current drug metabolism

DOI

2017

TERT promoter mutation status in sarcomatoid urothelial carcinomas of the upper urinary tract.

Xiaoyan Wang, A. López-Beltran, A. Osunkoya, Ming-Sheng Wang, Shao-Bo Zhang, D. Davidson, R. Emerson, S. Williamson, P. Tan, Hristos Z. Kaimakliotis, L. Baldridge, G. MacLennan, R. Montironi, Liang Cheng

Future Oncology

DOI

2017

Pathology and molecular updates in tumors of the prostate: towards a personalized approach

Silvia Gasparrini, A. Cimadamore, R. Mazzucchelli, M. Scarpelli, F. Massari, M. Raspollini, A. Galosi, A. López-Beltran, Liang Cheng, R. Montironi

Expert Review of Molecular Diagnostics

DOI

2017

Immunotherapy in genitourinary cancers: where are we going?

M. Bianconi, L. Faloppi, A. López-Beltran, Liang Cheng, A. Cimadamore, Silvia Gasparrini, F. Massari, M. Scarpelli, R. Montironi

DOI

2017

Basic Molecular Pathology of Prostate Cancer

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Primary Cystic Trophoblastic Tumor of the Testis: A Study of 14 Cases

D. Gondim, T. Ulbright, Liang Cheng, Muhammad T. Idrees

American Journal of Surgical Pathology

DOI

2017

Metastatic and Secondary Tumors of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Long non-coding RNAs in renal cell carcinoma: A systematic review and clinical implications

Ming Li, Ying Wang, Liang Cheng, Wan-Ting Niu, Guoan Zhao, J. K. Raju, Jun Huo, Bin Wu, B. Yin, Yong-Sheng Song, Ren-Ge Bu

OncoTarget

DOI

2017

Complexity of the genomic landscape of renal cell carcinoma: Implications for targeted therapy and precision immuno-oncology.

Joseph M. Sanfrancesco, Liang Cheng

Critical reviews in oncology/hematology

DOI

2017

Concomitant bladder cancer and prostate cancer: challenges and controversies

A. López-Beltran, Liang Cheng, F. Montorsi, M. Scarpelli, M. Raspollini, R. Montironi

Nature reviews. Urology

DOI

2017

Reply to Chou et al ‘Do significant TFE3 gene rearrangements occur in succinate dehydrogenase deficient renal cell carcinoma? Borderline FISH results should be interpreted with caution’ Mod Pathol 2017; in press.

S. Williamson, D. Grignon, A. Caliò, Bradley A. Stohr, J. Eble, Liang Cheng

Modern Pathology

DOI

2017

Metastatic small cell carcinoma of the prostate in an octogenarian with significant response to first-line chemotherapy

Anthony C. Wood, N. Adra, Liang Cheng, R. Pili

DOI

2017

Circulating Tumor Cells: A Reliable Biomarker for Prostate Cancer Treatment Assessment?

C. Ciccarese, R. Montironi, M. Fiorentino, G. Martignoni, M. Brunelli, R. Iacovelli, A. López-Beltran, Liang Cheng, M. Scarpelli, H. Moch, G. Tortora, F. Massari

Current drug metabolism

DOI

2017

Targeting the Programmed Cell Death-1 Pathway in Genitourinary Tumors: Current Progress and Future Perspectives.

S. Mann, A. López-Beltran, F. Massari, R. Pili, M. Fiorentino, M. Koch, Hristos Z. Kaimakliotis, Lisha Wang, M. Scarpelli, C. Ciccarese, H. Moch, R. Montironi, Liang Cheng

Current drug metabolism

DOI

2017

Variants of Bladder Cancer: The Pathologist's Point of View

A. López-Beltran, Liang Cheng, M. Raspollini, R. Canas-Marques, M. Scarpelli, A. Cimadamore, Silvia Gasparrini, R. Montironi

DOI

2017

Urinary Biomarkers for Prostate Cancer.

F. Giunchi, C. Ciccarese, R. Montironi, M. Scarpelli, A. López-Beltran, Liang Cheng, H. Moch, F. Massari, M. Fiorentino

Current drug metabolism

DOI

2017

Iatrogenic changes in the urinary tract

A. López-Beltran, G. Paner, R. Montironi, M. R. Raspollini, Liang Cheng

Histopathology

DOI

2017

Genomic Pathology and Cancer Biomarkers: Towards Precision Medicine

Liang Cheng, Q. Rao, Xiao-Tong Wang, Bo Zhang, R. Montironi

DOI

2017

Renal cell carcinoma with TFE3 translocation and succinate dehydrogenase B mutation

A. Caliò, D. Grignon, Bradley A. Stohr, S. Williamson, J. Eble, Liang Cheng

Modern Pathology

DOI

2017

From Gleason Grading System and High-grade Tertiary Patterns to Grade Groups and Integrated Quantitative Gleason Score.

R. Montironi, Liang Cheng, M. Scarpelli, A. López-Beltran

European Urology

DOI

2017

Tp53 and its potential therapeutic role as a target in bladder cancer

C. Ciccarese, F. Massari, A. Blanca, G. Tortora, R. Montironi, Liang Cheng, M. Scarpelli, M. Raspollini, N. Vau, J. Fonseca, A. López-Beltran

Expert opinion on therapeutic targets

DOI

2017

Whole Slide Imaging of Large Format Histology in Prostate Pathology: Potential for Information Fusion.

R. Montironi, A. Cimadamore, F. Massari, M. A. Montironi, A. López-Beltran, Liang Cheng, F. Montorsi, M. Scarpelli

Archives of Pathology & Laboratory Medicine

DOI

2017

Prostate cancer grading in 2016.

Silvia Gasparrini, R. Mazzucchelli, M. Scarpelli, F. Massari, M. Raspollini, A. López-Beltran, Liang Cheng, R. Montironi

Minerva urologica e nefrologica = The Italian journal of urology and nephrology

DOI

2017

Understanding the Genetic Landscape of Small Cell Carcinoma of the Urinary Bladder and Implications for Diagnosis, Prognosis, and Treatment: A Review

E. Kouba, Liang Cheng

JAMA Oncology

DOI

2017

Rhabdoid and Undifferentiated Phenotype in Renal Cell Carcinoma: Analysis of 32 Cases Indicating a Distinctive Common Pathway of Dedifferentiation Frequently Associated With SWI/SNF Complex Deficiency

A. Agaimy, Liang Cheng, L. Egevad, B. Feyerabend, O. Hes, B. Keck, S. Pizzolitto, S. Sioletic, B. Wullich, A. Hartmann

American Journal of Surgical Pathology

DOI

2017

Large Format Histology, Whole Slide Imaging and Multi-Criteria Decision Making

M. A. Montironi, Silvia Gasparrini, A. Cimadamore, A. López-Beltran, Liang Cheng, M. Scarpelli, R. Montironi, Jürgen Görtler, K. Kayser, S. Borkenfeld, Rita Carvalho, G. Kayser

2017

Soft Tissue and Miscellaneous Primary Tumors of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Extranodal extension of lymph node metastasis influences recurrence in prostate cancer: a systematic review and meta-analysis

C. Luchini, A. Fleischmann, Joost L. Boormans, M. Fassan, A. Nottegar, Paola Lucato, B. Stubbs, M. Solmi, A. Porcaro, N. Veronese, M. Brunelli, A. Scarpa, Liang Cheng

Scientific Reports

DOI

2017

Considerations for standardizing predictive molecular pathology for cancer prognosis

M. Fiorentino, M. Scarpelli, A. López-Beltran, Liang Cheng, R. Montironi

Expert Review of Molecular Diagnostics

DOI

2017

Pathology of the Prostatic Urethra

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Preservation of truncal genomic alterations in clear cell and papillary renal cell carcinomas with sarcomatoid features: An intra‐ and intertumoral, multifocal fluorescence in situ hybridization analysis reveals limited genetic heterogeneity

Joseph M. Sanfrancesco, J. Eble, D. Grignon, Ming-Sheng Wang, Shao-Bo Zhang, C. Sundaram, Muhammad T. Idrees, R. Pili, E. Kouba, Liang Cheng

Molecular Carcinogenesis

DOI

2017

Vasitis nodosa and related lesions: a modern immunohistochemical staining profile with special emphasis on novel diagnostic dilemmas.

Brie E. Kezlarian, Liang Cheng, N. Gupta, S. Williamson

Human Pathology

DOI

2017

In reply to: letter to the editor entitled: primary pure lymphoepithelioma-like carcinoma of the ureter

A. López-Beltran, G. Paner, A. Blanca, R. Montironi, T. Tsuzuki, Y. Nagashima, Shih-Sung Chuang, K. Win, L. Madruga, M. Raspollini, Liang Cheng

Virchows Archiv

DOI

2017

Tumors and Tumor-like Conditions of the Prostate Stroma

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Liquid Biopsies in the Management of Bladder Cancer: Next-Generation Biomarkers for Diagnosis, Surveillance, and Treatment-Response Prediction.

Yu Yang, C. R. Miller, A. López-Beltran, R. Montironi, M. Cheng, Shao-Bo Zhang, M. Koch, Hristos Z. Kaimakliotis, Liang Cheng

Critical reviews in oncogenesis

DOI

2017

Reprofiling Metastatic Samples for Chromosome 9p and 14q Aberrations as a Strategy to Overcome Tumor Heterogeneity in Clear-cell Renal Cell Carcinoma

F. Massari, C. Ciccarese, E. Bria, C. Porta, F. La Russa, S. Knuutila, W. Artibani, A. Porcaro, Davide Bimbatti, Alessandra Modena, T. Sava, G. Tortora, Liang Cheng, Albino Eccher, Luca Cima, S. Pedron, C. Ghimenton, G. Martignoni, M. Brunelli

Applied immunohistochemistry & molecular morphology (Print)

DOI

2017

Müllerian Adenosarcoma of the Urinary Bladder: Clinicopathologic and Immunohistochemical Features With Novel Genetic Aberrations

Joseph M. Sanfrancesco, S. Williamson, J. Kum, Shao-Bo Zhang, Ming-Sheng Wang, A. López-Beltran, R. Montironi, T. Gardner, Liang Cheng

Clinical Genitourinary Cancer

DOI

2017

Epigenetic Modifications and Modulators in Prostate Cancer.

A. Cimadamore, Silvia Gasparrini, M. Scarpelli, A. Doria, R. Mazzucchelli, F. Massari, Liang Cheng, A. López-Beltran, R. Montironi

Critical reviews in oncogenesis

DOI

2017

Activity of chemokines in prostate and renal tumors and their potential role as future therapeutic targets.

A. Cimadamore, M. Scarpelli, F. Piva, F. Massari, Silvia Gasparrini, A. Doria, Liang Cheng, A. López-Beltran, R. Montironi

Future Oncology

DOI

2017

Basic Anatomy and Histology of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Whole Slide Imaging Versus Microscopy for Primary Diagnosis in Surgical Pathology

S. Mukhopadhyay, M. Feldman, Esther Abels, R. Ashfaq, S. Beltaifa, Nicolas Cacciabeve, H. Cathro, Liang Cheng, K. Cooper, G. Dickey, R. Gill, Robert Heaton, R. Kerstens, G. Lindberg, R. Malhotra, J. Mandell, Ellen D. Manlucu, A. Mills, S. E. Mills, C. Moskaluk, M. Nelis, D. Patil, C. Przybycin, J. Reynolds, B. Rubin, M. Saboorian, Mauricio N Salicru, M. Samols, C. Sturgis, K. Turner, M. Wick, J. Yoon, Po Zhao, C. Taylor

American Journal of Surgical Pathology

DOI

2017

Adenocarcinoma of the Prostate

A. López-Beltran, Liang Cheng, R. Montironi, M. Raspollini

DOI

2017

Perspectives on testicular sex cord-stromal tumors and those composed of both germ cells and sex cord-stromal derivatives with a comparison to corresponding ovarian neoplasms.

L. Roth, Bingjian Lyu, Liang Cheng

Human Pathology

DOI

2016

BLAT2DOLite: An Online System for Identifying Significant Relationships between Genetic Sequences and Diseases

Liang Cheng, Shuo Zhang, Yang Hu

PLoS ONE

DOI

2016

IntNetLncSim: an integrative network analysis method to infer human lncRNA functional similarity

Liang Cheng, Hongbo Shi, Zhenzhen Wang, Yang Hu, Haixiu Yang, Chen Zhou, Jie Sun, Meng Zhou

Oncotarget

DOI

2016

A potential panel of six-long non-coding RNA signature to improve survival prediction of diffuse large-B-cell lymphoma

Jie Sun, Liang Cheng, Hongbo Shi, Zhaoyue Zhang, Hengqiang Zhao, Zhenzhen Wang, Meng Zhou

Scientific Reports

DOI

2016

Relapse-related long non-coding RNA signature to improve prognosis prediction of lung adenocarcinoma

Meng Zhou, Wanying Xu, Yue X, Hengqiang Zhao, Zhenzhen Wang, Hongbo Shi, Liang Cheng, Jie Sun

Oncotarget

DOI

2016

Integration of Multiple Genomic and Phenotype Data to Infer Novel miRNA-Disease Associations

Hongbo Shi, Guangde Zhang, Meng Zhou, Liang Cheng, Haixiu Yang, Jing Wang, Jie Sun, Zhenzhen Wang

PLoS ONE

DOI

2016

Characterization of long non-coding RNA-associated ceRNA network to reveal potential prognostic lncRNA biomarkers in human ovarian cancer

Meng Zhou, Xiaojun Wang, Hongbo Shi, Liang Cheng, Zhenzhen Wang, Hengqiang Zhao, Lei Yang, Jie Sun

Oncotarget

DOI

2016

Annotating the Function of the Human Genome with Gene Ontology and Disease Ontology

Yang Hu, Wenyang Zhou, Jun Ren, Lixiang Dong, Yadong Wang, Shuilin Jin, Liang Cheng

BioMed Research International

DOI

2016

InfDisSim: A novel method for measuring disease similarity based on information flow

Yang Hu, Meng Zhou, Hongbo Shi, Hong Ju, Qinghua Jiang, Liang Cheng

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2016

DisSetSim: An online system for calculating similarity between disease sets

Yang Hu, Lingling Zhao, Zhiyan Liu, Hong Ju, Hongbo Shi, Peigang Xu, Yadong Wang, Liang Cheng

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2016

A novel method to identify pre-microRNA in various species knowledge base

Tianyi Zhao, Ningyi Zhang, Jun Ren, Peigang Xu, Zhiyan Liu, Liang Cheng, Yang Hu

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2016

OAHG: an integrated resource for annotating human genes with multi-level ontologies

Liang Cheng, Jie Sun, Wanying Xu, Lixiang Dong, Yang Hu, Meng Zhou

Scientific Reports

DOI

2016

Construction and analysis of dysregulated lncRNA-associated ceRNA network identified novel lncRNA biomarkers for early diagnosis of human pancreatic cancer

Meng Zhou, Zhiyong Diao, Yue X, Chen Yang, Hengqiang Zhao, Liang Cheng, Jie Sun

Oncotarget

DOI

2016

DisSim: an online system for exploring significant similar diseases and exhibiting potential therapeutic drugs

Liang Cheng, Yue Jiang, Zhenzhen Wang, Hongbo Shi, Jie Sun, Haixiu Yang, Shuo Zhang, Yang Hu, Meng Zhou

Scientific Reports

DOI

2016

Studying Dynamic Features in Myocardial Infarction Progression by Integrating miRNA-Transcription Factor Co-Regulatory Networks and Time-Series RNA Expression Data from Peripheral Blood Mononuclear Cells

Hongbo Shi, Guangde Zhang, Jing Wang, Zhenzhen Wang, Xiaoxia Liu, Liang Cheng, Weimin Li

PLoS ONE

DOI

2016

Latent Semantic Analysis- and Hierarchical Clustering-Based Method for Detecting Remote Protein Homology

Tianjiao Zhang, Yue Jiang, Liang Cheng, Yang Hu, Ya-Dong Wang

DOI

2016

PD33-03 ADJUSTED CLINICAL OUTCOMES IN PATIENTS WITH SARCOMATOID VARIANT UROTHELIAL CARCINOMA UNDERGOING RADICAL CYSTECTOMY FOR MUSCLE INVASIVE DISEASE

J. Jacob, Francesca M. Monn, Tim Large, Jane S. Cho, Benjamin Judge, J. Pedrosa, R. Bihrle, Liang Cheng, M. Koch, Hristos Z. Kaimakliotis

DOI

2016

Emerging trends in the evaluation and management of small cell prostate cancer: a clinical and molecular perspective

M. Monn, Liang Cheng

Expert Review of Anticancer Therapy

DOI

2016

On the histogenesis of mixed germ cell-sex cord stromal tumour of the gonads

L. Roth, Liang Cheng

Journal of Clinical Pathology

DOI

2016

Multiple and bilateral kidney tumors with clear cells of three different histotypes: A case report with clinicopathologic and molecular study

M. R. Raspollini, F. Castiglione, G. Martignoni, A. Lapini, Liang Cheng, R. Montironi, A. López-Beltran

Acta Pathologica, Microbiologica et Immunologica Scandinavica (APMIS)

DOI

2016

SMARCB1/INI1 Genetic Alterations in Renal Medullary Carcinomas.

A. López-Beltran, Liang Cheng, M. Raspollini, R. Montironi

European Urology

DOI

2016

Chromosome 12p abnormalities and IMP3 expression in prepubertal pure testicular teratomas.

K. Cornejo, Liang Cheng, A. Church, Ming-Sheng Wang, Zhong Jiang

Human Pathology

DOI

2016

Neuroendocrine Tumors of the Prostate: Emerging Insights from Molecular Data and Updates to the 2016 World Health Organization Classification

David S. Priemer, R. Montironi, Lisha Wang, S. Williamson, A. López-Beltran, Liang Cheng

Endocrine pathology

DOI

2016

Emerging Immunotargets in Metastatic Renal Cell Carcinoma.

J. Kucharczyk, M. Matrana, M. Santoni, F. Massari, M. Scarpelli, Liang Cheng, A. López-Beltran, S. Cascinu, R. Montironi, M. Holger

Current Drug Targets

DOI

2016

High fidelity of driver chromosomal alterations among primary and metastatic renal cell carcinomas: implications for tumor clonal evolution and treatment

Eril J Kouba, J. Eble, Novae B. Simper, D. Grignon, Ming-Sheng Wang, Shao-Bo Zhang, Lisha Wang, G. Martignoni, S. Williamson, M. Brunelli, C. Luchini, A. Caliò, Liang Cheng

Modern Pathology

DOI

2016

Prostate cancer glands with cribriform architecture and with glomeruloid features should be considered as Gleason pattern 4 and not pattern 3.

D. Minardi, R. Mazzucchelli, M. Scarpelli, F. Massari, C. Ciccarese, A. López-Beltran, Liang Cheng, R. Montironi

Future Oncology

DOI

2016

Handling of the Surgical Specimen and Pathology Reporting of Penile Neoplasms

R. Montironi, R. Mazzucchelli, M. Santoni, Valeria Sotte, A. López-Beltran, Liang Cheng, M. Scarpelli

DOI

2016

Editorial: Emerging Immunotargets in Genitourinary Tumors.

R. Montironi, M. Santoni, F. Massari, A. López-Beltran, Liang Cheng, R. Berardi, M. Scarpelli

Current Drug Targets

2016

Tubulocystic renal cell carcinoma is an entity that is immunohistochemically and genetically distinct from papillary renal cell carcinoma

Thu Tran, Carol L. Jones, S. Williamson, J. Eble, D. Grignon, Shao-Bo Zhang, Ming-Sheng Wang, L. Baldridge, Lisha Wang, R. Montironi, M. Scarpelli, P. Tan, Novae B. Simper, E. Compérat, Liang Cheng

Histopathology

DOI

2015

基于疾病本体的疾病相似性计算方法

李杰，初砚硕，程亮，王亚东，孔蕾蕾

《生物化学与生物物理进展》

2015

A potential prognostic long non-coding RNA signature to predict metastasis-free survival of breast cancer patients

Jie Sun, Xihai Chen, Zhenzhen Wang, Maoni Guo, Hongbo Shi, Xiaojun Wang, Liang Cheng, Meng Zhou

Scientific Reports

DOI

2015

Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

Meng Zhou, Hengqiang Zhao, Zhenzhen Wang, Liang Cheng, Lei Yang, Hongbo Shi, Haixiu Yang, Jie Sun

Journal of Experimental & Clinical Cancer Research

DOI

2015

MicroRNA and Transcription Factor Mediated Regulatory Network Analysis Reveals Critical Regulators and Regulatory Modules in Myocardial Infarction

Guangde Zhang, Hongbo Shi, Lin Wang, Meng Zhou, Zhenzhen Wang, Xiaoxia Liu, Liang Cheng, Weimin Li, Xueqi Li

PLoS ONE

DOI

2015

Corrigendum

Liang Cheng, He Zhuang, Shuo Yang, Hui-Jie Jiang, Song Wang, Jun Zhang

DOI

2015

Using Semantic Association to Extend and Infer Literature-Oriented Relativity Between Terms

Liang Cheng, Jie Li, Yang Hu, Yue Jiang, Yong-Zhuang Liu, Yan-Shuo Chu, Zhenxing Wang, Ya-Dong Wang

IEEE/ACM Transactions on Computational Biology & Bioinformatics

DOI

2014

SemFunSim: A New Method for Measuring Disease Similarity by Integrating Semantic and Gene Functional Association

Liang Cheng, Jie Li, Peng Ju, Jia-Jie Peng, Ya-Dong Wang

PLoS ONE

DOI

2013

SIDD: A Semantically Integrated Database towards a Global View of Human Disease

Liang Cheng, Guohua Wang, Jie Li, Tianjiao Zhang, Peigang Xu, Ya-Dong Wang

PLoS ONE

DOI

2012

绵羊Ghrelin基因的克隆和生物信息学分析

程亮，王维民，李发弟，马友记，郭江鹏

《甘肃农业大学学报》

2010

Urothelial dysplasia and other flat lesions of the urinary bladder: clinicopathologic and molecular features.

K. Hodges, A. López-Beltran, D. Davidson, R. Montironi, Liang Cheng

Human Pathology

DOI

2010

Bladder, Urethra, and Urachus

G. MacLennan, Liang Cheng

DOI

2010

Neural neoplasms of the bladder.

D. Willis, B. Canales, Liang Cheng, G. MacLennan

Journal of Urology

DOI

2010

Invasive micropapillary urothelial carcinoma of the bladder.

A. López-Beltran, R. Montironi, A. Blanca, Liang Cheng

Human Pathology

DOI

2010

Large cell undifferentiated carcinoma of the urinary bladder

A. López-Beltran, Liang Cheng, E. Compérat, M. Rouprêt, A. Blanca, C. Menéndez, R. Montironi

Pathology (Sydney)

DOI

2010

Diagnosis, evaluation and treatment of carcinoma in situ of the urinary bladder: the state of the art.

S. Williamson, R. Montironi, A. López-Beltran, G. MacLennan, D. Davidson, Liang Cheng

Critical reviews in oncology/hematology

DOI

2010

The origins of urothelial carcinoma

Liang Cheng, D. Davidson, G. MacLennan, S. Williamson, Shao-Bo Zhang, M. Koch, R. Montironi, A. López-Beltran

Expert Review of Anticancer Therapy

DOI

2010

Interobserver Reproducibility in the Diagnosis of Invasive Micropapillary Carcinoma of the Urinary Tract Among Urologic Pathologists

Ankur R. Sangoi, Andrew H. Beck, M. Amin, Liang Cheng, J. Epstein, D. Hansel, K. Iczkowski, A. López-Beltran, E. Oliva, G. Paner, V. Reuter, J. Ro, R. Shah, S. Shen, P. Tamboli, J. McKenney

American Journal of Surgical Pathology

DOI

2010

Cyclin D3 gene amplification in bladder carcinoma in situ

A. López-Beltran, J. Ordoñez, A. P. Otero, A. Blanca, V. Sevillano, M. Sánchez-Carbayo, E. Muñoz, Liang Cheng, R. Montironi, E. de Álava

Virchows Archiv

DOI

2010

Urothelial Carcinoma of the Bladder, Lipid Cell Variant: Clinicopathologic Findings and LOH Analysis

A. López-Beltran, M. Amin, Pedro S. Oliveira, R. Montironi, F. Algaba, J. McKenney, I. de Torres, C. Mazerolles, Ming-Sheng Wang, Liang Cheng

American Journal of Surgical Pathology

DOI

2010

Small cell carcinoma of the urinary bladder.

M. Pant-Purohit, A. López-Beltran, R. Montironi, G. MacLennan, Liang Cheng

Histology and Histopathology

DOI

2009

Urothelial carcinoma following augmentation cystoplasty: an aggressive variant with distinct clinicopathological characteristics and molecular genetic alterations

Ming-Tse Sung, Shao-Bo Zhang, A. López-Beltran, R. Montironi, Ming-Sheng Wang, D. Davidson, M. Koch, M. Cain, R. Rink, Liang Cheng

Histopathology

DOI

2009

Staging and reporting of urothelial carcinoma of the urinary bladder

Liang Cheng, R. Montironi, D. Davidson, A. López-Beltran

Modern Pathology

DOI

2009

Editorial comment on: Expression of the endothelin axis in noninvasive and superficially invasive bladder cancer: relation to clinicopathologic and molecular prognostic parameters.

R. Montironi, M. Scarpelli, A. López-Beltran, Liang Cheng

European Urology

DOI

2009

Conserved Genetic Findings in Metastatic Bladder Cancer

Liang Cheng, D. Bostwick, Guang Li, Shao-Bo Zhang, A. Vortmeyer, Z. Zhuang

2009

Sarcomatoid carcinoma of the upper urinary tract: clinical outcome and molecular characterization.

Xiaoyan Wang, G. MacLennan, Shao-Bo Zhang, R. Montironi, A. López-Beltran, P. Tan, Stephanie R Foster, L. Baldridge, Liang Cheng

Human Pathology

DOI

2009

tumour aggressiveness with enhanced vascularisation directed by angioproliferative tumour factors. In bladder carcinoma, the role of tumour vasculature for progression and prognosis is still controversial. Some authors hypothe- size an association among upregulated vascularity, less favourable progn

R. Montironi, M. Scarpelli, A. López-Beltran, Liang Cheng

2009

TP53 mutational analysis supports monoclonal origin of biphasic sarcomatoid urothelial carcinoma (carcinosarcoma) of the urinary bladder

Andrew B Armstrong, Ming-Sheng Wang, J. Eble, G. MacLennan, R. Montironi, P. Tan, A. López-Beltran, Shao-Bo Zhang, L. Baldridge, Helena Spartz, Liang Cheng

Modern Pathology

DOI

2009

Molecular determinants of tumor recurrence in the urinary bladder.

Liang Cheng, Shao-Bo Zhang, D. Davidson, G. MacLennan, M. Koch, R. Montironi, A. López-Beltran

Future Oncology

DOI

2009

Plasmacytoid urothelial carcinoma of the bladder.

A. López-Beltran, M. Requena, R. Montironi, A. Blanca, Liang Cheng

Human Pathology

DOI

2009

2004 World Health Organization Classification of the Noninvasive Urothelial Neoplasms: Inherent Problems and Clinical Reflections

R. Montironi, A. López-Beltran, M. Scarpelli, R. Mazzucchelli, Liang Cheng

DOI

2009

FGFR3 and TP53 mutation analysis in inverted urothelial papilloma: incidence and etiological considerations

S. Lott, Ming-Sheng Wang, Shao-Bo Zhang, G. MacLennan, A. López-Beltran, R. Montironi, Ming-Tse Sung, P. Tan, Liang Cheng

Modern Pathology

DOI

2009

Molecular pathogenesis of urothelial carcinoma: the clinical utility of emerging new biomarkers and future molecular classification of bladder cancer.

S. Lacy, A. López-Beltran, G. MacLennan, Stephanie R Foster, R. Montironi, Liang Cheng

Analytical and quantitative cytology and histology

2009

Pleomorphic giant cell carcinoma of the urinary bladder.

A. López-Beltran, A. Blanca, R. Montironi, Liang Cheng, J. C. Regueiro

Human Pathology

DOI

2008

Expression of RNA-binding protein IMP3 (KOC) in benign urothelium and urothelial tumors.

Lin Li, Hao-Dong Xu, B. Spaulding, Liang Cheng, R. Simon, Jorge L. Yao, P. A. di Sant'agnese, P. Bourne, Jiao-Ti Huang

Human Pathology

DOI

2008

Immunohistochemical Evaluation of Global DNA Methylation and Histone Acetylation in Papillary Urothelial Neoplasm of Low Malignant Potential

F. Barbisan, R. Mazzucchelli, A. Santinelli, Daniela Stramazzotti, M. Scarpelli, A. López-Beltran, Liang Cheng, R. Montironi

International Journal of Immunopathology and Pharmacology

DOI

2008

Pathological variants of invasive bladder cancer according to their suggested clinical significance

A. López-Beltran, M. J. Requena, Liang Cheng, R. Montironi

BJU International

DOI

2008

Morphological classification and definition of benign, preneoplastic and non‐invasive neoplastic lesions of the urinary bladder

R. Montironi, A. López-Beltran, M. Scarpelli, R. Mazzucchelli, Liang Cheng

Histopathology

DOI

2008

Inflammatory myofibroblastic tumors of the genitourinary tract--single entity or continuum?

Liang Cheng, Stephanie R Foster, G. MacLennan, A. López-Beltran, Shao-Bo Zhang, R. Montironi

Journal of Urology

DOI

2008

Grade 1 Urothelial Carcinoma Versus PUNLMP: Current Status

Lina Liu, Liang Cheng

DOI

2008

Editorial comment on: Prediction of progression of non-muscle-invasive bladder cancer by WHO 1973 and 2004 grading and by FGFR3 mutation status: a prospective study.

R. Montironi, A. López-Beltran, Liang Cheng

European Urology

DOI

2008

Hypermethylation of tumor-suppressor gene CpG islands in small-cell carcinoma of the urinary bladder

P. Abbosh, Ming-Sheng Wang, J. Eble, A. López-Beltran, G. MacLennan, R. Montironi, Su-Qin Zheng, C. Pan, Honghong Zhou, Liang Cheng

Modern Pathology

DOI

2008

Histogenesis of Clear Cell Adenocarcinoma in the Urinary Tract: Evidence of Urothelial Origin

Ming-Tse Sung, Shao-Bo Zhang, G. MacLennan, A. López-Beltran, R. Montironi, Ming-Sheng Wang, P. Tan, Liang Cheng

Clinical Cancer Research

DOI

2008

Proteomic‐based approach for biomarkers discovery in early detection of invasive urothelial carcinoma

Junyu Li, Shaji Abraham, Liang Cheng, F. Witzmann, M. Koch, Jun Xie, Munazzah Rahman, Sulma I. Mohammed

PROTEOMICS - Clinical Applications

DOI

2008

Overdiagnosis of bladder carcinoma.

Liang Cheng, D. Bostwick

Analytical and quantitative cytology and histology

2008

Morphological and molecular profiles and pathways in bladder neoplasms.

A. López-Beltran, Liang Cheng, R. Mazzucchelli, M. Bianconi, A. Blanca, M. Scarpelli, R. Montironi

Anticancer Research

2008

Strong immunohistochemical expression of fibroblast growth factor receptor 3, superficial staining pattern of cytokeratin 20, and low proliferative activity define those papillary urothelial neoplasms of low malignant potential that do not recur

F. Barbisan, A. Santinelli, R. Mazzucchelli, A. López-Beltran, Liang Cheng, M. Scarpelli, T. van der Kwast, R. Montironi

Cancer

DOI

2007

Small Cell Carcinoma of the Urinary Bladder—Histogenesis, Genetics, Diagnosis, Biomarkers, Treatment, and Prognosis

Xiaoyan Wang, G. MacLennan, A. López-Beltran, Liang Cheng

Applied immunohistochemistry & molecular morphology (Print)

DOI

2007

Soft tissue tumors of the urinary bladder Part II: malignant neoplasms.

S. Lott, A. López-Beltran, R. Montironi, G. MacLennan, Liang Cheng

Human Pathology

DOI

2007

Epidermal Growth Factor Receptor Protein Expression and Gene Amplification in Small Cell Carcinoma of the Urinary Bladder

Xiaoyan Wang, Shao-Bo Zhang, G. MacLennan, J. Eble, A. López-Beltran, Xi-Ming J. Yang, C. Pan, Honghong Zhou, R. Montironi, Liang Cheng

Clinical Cancer Research

DOI

2007

Pathology of tumors of the renal pelvis and ureter and the urethra

A. López-Beltran, R. Montironi, Alfredo Vidal-Jiménez, Liang Cheng

DOI

2007

Soft tissue tumors of the urinary bladder, Part I: myofibroblastic proliferations, benign neoplasms, and tumors of uncertain malignant potential.

S. Lott, A. López-Beltran, G. MacLennan, R. Montironi, Liang Cheng

Human Pathology

DOI

2007

Histologic grading of noninvasive papillary urothelial neoplasms.

G. MacLennan, Z. Kirkali, Liang Cheng

European Urology

DOI

2007

Morphological diagnosis of urothelial neoplasms

R. Montironi, R. Mazzucchelli, M. Scarpelli, A. López-Beltran, Liang Cheng

Journal of Clinical Pathology

DOI

2007

Urothelial Carcinoma With an Inverted Growth Pattern Can be Distinguished From Inverted Papilloma by Fluorescence In Situ Hybridization, Immunohistochemistry, and Morphologic Analysis

T. Jones, Shao-Bo Zhang, A. López-Beltran, J. Eble, Ming-Tse Sung, G. MacLennan, R. Montironi, P. Tan, Su-Qin Zheng, L. Baldridge, Liang Cheng

American Journal of Surgical Pathology

DOI

2007

Expression of S100 protein family members in the pathogenesis of bladder tumors.

R. Yao, A. López-Beltran, G. MacLennan, R. Montironi, J. Eble, Liang Cheng

Anticancer Research

2007

Pathology of tumors of the urinary bladder

A. López-Beltran, R. Montironi, Alfredo Vidal-Jiménez, Liang Cheng

DOI

2007

Telomere Shortening and Chromosomal Abnormalities in Intestinal Metaplasia of the Urinary Bladder

M. Morton, Shao-Bo Zhang, A. López-Beltran, G. MacLennan, J. Eble, R. Montironi, Ming-Tse Sung, P. Tan, Su-Qin Zheng, Honghong Zhou, Liang Cheng

Clinical Cancer Research

DOI

2006

"Field cancerization" in the urothelium of the bladder.

D. Davidson, Liang Cheng

Analytical and quantitative cytology and histology

2006

Papillary urothelial neoplasm of low malignant potential: evolving terminology and concepts.

T. Jones, Liang Cheng

Journal of Urology

DOI

2006

Expression of EphA2 and Ephrin A-1 in Carcinoma of the Urinary Bladder

Shaji Abraham, D. Knapp, Liang Cheng, P. Snyder, S. Mittal, D. Bangari, M. Kinch, Lan Wu, Jay Dhariwal, Sulma I. Mohammed

Clinical Cancer Research

DOI

2006

Inverted papilloma of the urinary bladder: a molecular genetic appraisal

Ming-Tse Sung, J. Eble, Ming-Sheng Wang, P. Tan, A. López-Beltran, Liang Cheng

Modern Pathology

DOI

2006

Divergent pathway of intestinal metaplasia and cystitis glandularis of the urinary bladder

Ming-Tse Sung, A. López-Beltran, J. Eble, G. MacLennan, P. Tan, R. Montironi, T. Jones, T. Ulbright, J. Blair, Liang Cheng

Modern Pathology

DOI

预印本

2026

Large-scale proteome inference from unpaired single-cell transcriptomic and proteomic data by msInfer

Yadong Wang, Tianyi Zhao, Yuzhi Sun, Renjie Liu, Liyuan Zhang, Chengcheng Zhang, Yuran Jia, Liang Cheng, Guohua Wang

Research Square

DOI

2026

MetaSAG: A Tool for Multi-level Exploration and Taxonomic Analysis of Microbial Single-Amplified Genomes

Sainan Zhang, Meiyu Du, Guanzhi He, Kai Qian, Kexin Li, Baifeng Li, Ping Wang, Minke Lu, Xiaoliang Wu, Chao Wang, Hongbin Han, Shuofeng Yuan, Xue Zhang, Liang Cheng

bioRxiv (Cold Spring Harbor Laboratory)

DOI

2025

Large-scale proteomic inference at single-cell resolution by scInfer

Yadong Wang, Tianyi Zhao, Yuzhi Sun, Renjie Liu, Liyuan Zhang, Chengcheng Zhang, Yuran Jia, Liang Cheng, Guohua Wang

Research Square

DOI

2021

Comprehensive Characterization of Tumor Microenvironment Differences in Cancer between Male and Female Patients

Junwei Han, Yang Yang, Xiangmei Li, Jiashuo Wu, Yuqi Sheng, Jiayue Qiu, Liang Cheng, Yan Zhang

SSRN Electronic Journal

DOI

书籍章节

2026

FCGR2A promoter variant reveals shared genetic susceptibility between IBD and stroke

Wang X, Zijun Zhu, Hailong Li, Jiwei Gao, Mingyang Ding, Li Y, S Y Lei, Shimao Zhu, Liang Cheng

Molecular and Cellular Biochemistry

DOI

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