王超｜山东理工大学｜学者主页

2026

CHD1L maintains genome integrity by facilitating okazaki fragment maturation

Li-Tong Nie, Jia-Ling Fu, Min Huang, Hui-Min Zhang, Tian-Tian Ma, Chang Yang, Siting Li, Chao Wang, Jun-Jie Chen

Nucleic Acids Research

DOI

2026

绵羊乳脂沉积关键基因筛选及lncRNA-miRNA-mRNA调控网络构建

张羽欣，郭妍岩，李玉鹏，郭晓飞，张效生，王超，阮维斌，姚大为

《农业生物技术学报》

2026

盐碱地中不同倍性小麦根际和根内丛枝菌根真菌特征的比较分析

陈丽，陈洁菲，冯彪，刘丹，王超，李浩，施卫明，王萌

《基因组学与应用生物学》

DOI

2025

USP37 counteracts HLTF to protect damaged replication forks and promote survival of BRCA1-deficient cells and PARP inhibitor resistance

Mengfan Tang, Siting Li, Z. Zhu, Chao Wang, Shuai Ding, Hui-Min Zhang, Min Huang, Sarah Keast, Zhen Chen, Ling Yin, Li-Tong Nie, Dan Su, Xu Feng, Jun-Jie Chen

Nucleic Acids Research

DOI

2025

Cell cycle progression of under-replicated cells

Min Huang, Chang Yang, Li-Tong Nie, Hui-Min Zhang, Dan-Dan Zhu, Chao Wang, Jeong-Min Park, Mrinal Srivastava, Elina A. Mosa, Siting Li, Mengfan Tang, Xu Feng, Sarah Keast, F. Stossi, Jun-Jie Chen

Nucleic Acids Research

DOI

2025

基于生物信息学技术筛选脑出血的差异基因和药物及转录因子预测

刘建，杨莎，曾宇，孔卓，王方，张继勤，王超，谭赢

《安徽医药》

2025

基于转录组学分析红小豆热加工蛋白水解物的降脂机理

赵卿宇，郝智慧，席孟瑶，王超，薛勇，沈群

《中国食品学报》

DOI

2025

山新杨PdaYABBY1基因克隆及表达分析

陈彤，董心仪，高向博，朱祯煜，王超

《植物生理学报》

2025

机器学习识别LRRC15和MICB为类风湿关节炎的免疫诊断标志物

田彦虎，黄心岸，郭桐桐，如斯坦木·阿合坦木，罗江淼，肖遥，王超，王维山

《中国组织工程研究》

2024

DePARylation is critical for S phase progression and cell survival

Li-Tong Nie, Chao Wang, Min Huang, Xiaoguang Liu, Xu Feng, Mengfan Tang, Siting Li, Q. Hang, Hong-Qi Teng, Xi Shen, Li Ma, Bo-Yi Gan, Jun-Jie Chen

eLife

DOI

2024

In vivo CRISPR screens identify Mga as an immunotherapy target in triple-negative breast cancer

Xu Feng, Chang Yang, Yuan-Jian Huang, Dan Su, Chao Wang, Lori L. Wilson, Ling Yin, Mengfan Tang, Siting Li, Zhen Chen, Dan-Dan Zhu, Shimin Wang, Sheng-Zhe Zhang, Jie Zhang, Hui-Min Zhang, Li-Tong Nie, Min Huang, Jae-Il Park, Traver Hart, Da-Di Jiang, Kui-Rong Jiang, Jun-Jie Chen

Proceedings of the National Academy of Sciences of the United States of America

DOI

2024

Systematic investigation of BRCA1-A, -B, and -C complexes and their functions in DNA damage response and DNA repair

Siting Li, Mengfan Tang, Yun Xiong, Xu Feng, Chao Wang, Li-Tong Nie, Min Huang, Hui-Min Zhang, Ling Yin, Dan-Dan Zhu, Chang Yang, Tian-Tian Ma, Jun-Jie Chen

Oncogene

DOI

2024

基于生物信息学方法分析麻醉药对乳腺癌基因表达的影响

王超

《新疆医科大学》

2024

基于生物信息学的通心络胶囊治疗急性心肌梗死的研究（英文）

苏靖靖，苏康康，宋艳平，郝丽慧，王杏，杨林泉，王超，陈淑霞，谷剑

Journal of Chinese Pharmaceutical Sciences

2024

基于转录组学探讨可视化针刀治疗股骨头坏死疼痛触发点模型比格犬的作用机制

孙诗艺，颜炎，何海军，吴子轩，王超，张程，张光熠

《中医学报》

2024

CD36抗原缺失Ⅰ型4种碱基突变及蛋白结构生物信息学分析

王超，吕蓉，胡晓玉，赵娜娜

《临床输血与检验》

2023

RAD54L2-mediated DNA damage avoidance pathway specifically preserves genome integrity in response to topoisomerase 2 poisons

Hui-Min Zhang, Yun Xiong, Yi-Lun Sun, Jeong-Min Park, Dan Su, Xu Feng, Sarah Keast, Mengfan Tang, Min Huang, Chao Wang, Mrinal Srivastava, Chang Yang, Dan-Dan Zhu, Zhen Chen, Siting Li, Ling Yin, Y. Pommier, Jun-Jie Chen

Science Advances

DOI

2023

Genome-Wide CRISPR Screens Reveal ZATT as a Synthetic Lethal Target of TOP2-Poison Etoposide That Can Act in a TDP2-Independent Pathway

Jeong-Min Park, Hui-Min Zhang, Li-Tong Nie, Chao Wang, Min Huang, Xu Feng, Mengfan Tang, Zhen Chen, Yun Xiong, Namsoo Lee, Siting Li, Ling Yin, Traver Hart, Jun-Jie Chen

International Journal of Molecular Sciences

DOI

2023

FACS-based genome-wide CRISPR screens define key regulators of DNA damage signaling pathways

Min Huang, F. Yao, Li-Tong Nie, Chao Wang, Dan Su, Hui-Min Zhang, Siting Li, Mengfan Tang, Xu Feng, Bing Yu, Zhen Chen, Shimin Wang, Ling Yin, Li-Sha Mou, Traver Hart, Jun-Jie Chen

Molecules and Cells

DOI

2023

基于生物信息学和机器学习探究生物钟相关基因在代谢相关性肝病中的表达及其意义

张凯，张峻，李诗琴，蒋炜，王超

《中国医药科学》

2022

Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors

Xu Feng, Mengfan Tang, Merve Dede, Dan Su, Guangsheng Pei, Dadi Jiang, Chao Wang, Zhen Chen, Mi Li, Li-Tong Nie, Yun Xiong, Siting Li, Jeong-Min Park, Hui-Min Zhang, Min Huang, Klaudia Szymonowicz, Zhongming Zhao, Traver Hart, Jun-Jie Chen

Science Advances

DOI

2022

TDP1-independent pathways in the process and repair of TOP1-induced DNA damage

Hui-Min Zhang, Yun Xiong, Dan Su, Chao Wang, Mrinal Srivastava, Mengfan Tang, Xu Feng, Min Huang, Zhen Chen, Jun-Jie Chen

Nature Communications

DOI

2022

Histone chaperone ASF1 acts with RIF1 to promote DNA end joining in BRCA1-deficient cells

Mengfan Tang, Zhen Chen, Chao Wang, Xu Feng, Namsoo Lee, Min Huang, Hui-Min Zhang, Siting Li, Yun Xiong, Jun-Jie Chen

Journal of Biological Chemistry

DOI

2022

Integrated screens uncover a cell surface tumor suppressor gene KIRREL involved in Hippo pathway

Chao Wang, Xu Feng, Dan Su, Zhen Chen, Shimin Wang, Mengfan Tang, Min Huang, Li-Tong Nie, Hui-Min Zhang, Siting Li, Ling Yin, Randy L. Johnson, Traver Hart, Jun-Jie Chen

Proceedings of the National Academy of Sciences of the United States of America

DOI

2022

山新杨LTP家族基因生物信息学及表达模式分析

孙乾，吴宇航，张雅譞，曹竞丹，石晶静，王超

《植物研究》

2022

小麦Lhc基因家族鉴定与表达模式分析

赵奇，茹京娜，李宜统，王超，徐兆师，王睿辉

《植物遗传资源学报》

2022

山新杨FLA家族基因生物信息学分析及其组织表达

贺有超，赵超，于颖，周美琪，赵磊飞，石鑫鑫，石晶静，和玉婷，赵鑫，王瑞，王超

《东北林业大学学报》

2022

山荆子WAK类受体激酶基因家族鉴定与表达分析

冒霞，王超，余宏强，朵虎，左存武

《分子植物育种》

2022

刚毛柽柳ThZFP3基因的克隆及表达特征分析

岳远志，贾园园，刘博雅，李垚，周天畅，赵鑫，王超

《植物生理学报》

2022

苹果和梨LysM-RLK响应腐烂病信号成员鉴定

王东东，温有福，赵丹，朵虎，王超，左存武

《植物生理学报》

2021

Comprehensive analysis of the host-virus interactome of SARS-CoV-2

Zhen Chen, Chao Wang, Xu Feng, Li-Tong Nie, Mengfan Tang, Hui-Min Zhang, Yun Xiong, S. Swisher, Mrinal Srivastava, Jun-Jie Chen

bioRxiv

DOI

2021

Interactomes of SARS‐CoV‐2 and human coronaviruses reveal host factors potentially affecting pathogenesis

Zhen Chen, Chao Wang, Xu Feng, Li-Tong Nie, Mengfan Tang, Hui-Min Zhang, Yun Xiong, S. Swisher, Mrinal Srivastava, Jun-Jie Chen

EMBO Journal

DOI

2021

Genetic vulnerabilities upon inhibition of DNA damage response

Chao Wang, Mengfan Tang, Zhen Chen, Li-Tong Nie, Siting Li, Yun Xiong, Klaudia Szymonowicz, Jeong-Min Park, Hui-Min Zhang, Xu Feng, Min Huang, Dan Su, Traver Hart, Jun-Jie Chen

Nucleic Acids Research

DOI

2021

Genome-wide CRISPR screens reveal cyclin C as synthetic survival target of BRCA2

Mengfan Tang, Guangsheng Pei, Dan Su, Chao Wang, Xu Feng, Mrinal Srivastava, Zhen Chen, Zhong-Ming Zhao, Jun-Jie Chen

Nucleic Acids Research

DOI

2021

基于生物信息学分析整合组方规律发掘白脉软膏治疗白脉病的作用机制及其功效组配伍特点

刘毓东，毛霞，张苏雅，周方婷，杨菲，王潇潇，陶雪莹，王超，林娜

《中国实验方剂学杂志》

DOI

2020

CRISPR/CAS9-based DNA damage response screens reveal gene-drug interactions

Dan Su, Xu Feng, Medina Colic, Yunfei Wang, Chun-Chao Zhang, Chao Wang, Mengfan Tang, Traver Hart, Jun-Jie Chen

DNA Repair

DOI

2020

Genome-wide CRISPR screen uncovers a synergistic effect of combining Haspin and Aurora kinase B inhibition

Min Huang, Xu Feng, Dan Su, Gang Wang, Chao Wang, Mengfan Tang, A. Paulucci-Holthauzen, Traver Hart, Jun-Jie Chen

Oncogene

DOI

2020

C17orf53 is identified as a Novel Gene Involved in Inter-strand Crosslink Repair

Chao Wang, Zhen Chen, Dan Su, Mengfan Tang, Li-Tong Nie, Hui-Min Zhang, Xu Feng, Rui Wang, Xi Shen, Mrinal Srivastava, M. McLaughlin, Traver Hart, Lei Li, Jun-Jie Chen

DNA Repair

DOI

2020

ATR inhibition potentiates ionizing radiation‐induced interferon response via cytosolic nucleic acid‐sensing pathways

Xu Feng, Anthony T. Tubbs, Chun-Chao Zhang, Mengfan Tang, Sriram Sridharan, Chao Wang, Dadi Jiang, Dan Su, Hui-Min Zhang, Zhen Chen, Li-Tong Nie, Yun Xiong, Min Huang, A. Nussenzweig, Jun-Jie Chen

EMBO Journal

DOI

2020

DNA polymerase ι compensates for Fanconi anemia pathway deficiency by countering DNA replication stress

Rui Wang, W. Lenoir, Chao Wang, Dan Su, M. McLaughlin, Qiang-Hua Hu, Xi Shen, Yanyan Tian, Naeh L. Klages-Mundt, E. Lynn, R. Wood, Jun-Jie Chen, Traver Hart, Lei Li

Proceedings of the National Academy of Sciences of the United States of America

DOI

2020

FOXK1 Participates in DNA Damage Response by Controlling 53BP1 Function

Mengfan Tang, Xu Feng, Guangsheng Pei, Mrinal Srivastava, Chao Wang, Zhen Chen, Siting Li, Hui-Min Zhang, Zhong-Ming Zhao, Xu Li, Jun-Jie Chen

Cell Reports

DOI

2020

生物信息学预测类风湿关节炎核心基因与互作miRNA

丁晓，郝颖，王维山，孟德峰，王梦雨，王超

《安徽医科大学学报》

DOI

2020

刚毛柽柳ThZFP1基因的克隆和表达分析

侯峥，赵鑫，李垚，王超

《植物生理学报》

DOI

2020

朝仓花椒转录组密码子偏好性分析

王超，赵懿琛，赵德刚

《分子植物育种》

DOI

2019

SLX4IP acts with SLX4 and XPF–ERCC1 to promote interstrand crosslink repair

Hui-Min Zhang, Zhen Chen, Yin Ye, Zu Ye, D. Cao, Yun Xiong, Mrinal Srivastava, Xu Feng, Mengfan Tang, Chao Wang, J. Tainer, Jun-Jie Chen

Nucleic Acids Research

DOI

2019

基于机器学习的植物表型基因的文献分类及其应用

王超

《安徽农业大学》

2019

副猪嗜血杆菌血清4型不同菌株间毒力相关基因验证及LpxC基因生物信息学分析

周媛媛，张学谅，王静，陈欣，李睿，尹荣兰，王超，黄晨，尹荣焕

《沈阳农业大学学报》

2019

高通量测序解析微生物肥料对红壤有机农田土壤微生物群落的影响

王超，陈刘军，田伟，黄思杰，王磊，席运官

《江苏农业科学》

DOI

2018

Replisome Dynamics and Their Functional Relevance upon DNA Damage through the PCNA Interactome

Mrinal Srivastava, Zhen Chen, Hui-Min Zhang, Mengfan Tang, Chao Wang, Sung-Yun Jung, Jun-Jie Chen

Cell Reports

DOI

2018

Genome-wide CRISPR screens reveal synthetic lethality of RNASEH2 deficiency and ATR inhibition

Chao Wang, Gang Wang, Xu Feng, Peter D. A. Shepherd, Jie Zhang, Mengfan Tang, Zhen Chen, Mrinal Srivastava, M. McLaughlin, N. Navone, G. T. Hart, Jun-Jie Chen

Oncogene

DOI

2017

羊草14-3-3蛋白基因的克隆及其在Na2CO3胁迫下的表达分析

王超，张旸，解莉楠

《分子植物育种》

2017

大豆肌醇加氧酶基因响应线虫胁迫的表达分析

王学敏，杨若巍，王超，陈井生，王惠，段玉玺

《中国油料作物学报》

2016

紫苏HPPR基因启动子的克隆及植物表达载体构建

郭宇，郝磊，吕晓玲，赵雪，王超，何东

《分子植物育种》

2016

羊种布氏杆菌3型Omp25基因序列及其表达蛋白生物信息学分析

贺容，张生珍，王超，刁正鹏，薛红梅，徐立青，李增魁

《江苏农业科学》

2016

一例副猪嗜血杆菌的分离鉴定及16S rRNA生物信息学分析

李曦婷，王超，薛彦杰，李化生，张翔，尹荣兰，董俏，刘梦志，李睿，尹荣焕

《沈阳农业大学学报》

2016

基于转录组测序的马尔尼菲青霉菌实时荧光定量PCR内参基因筛选与鉴定

陶玉婷，卢姗，王超，王俊杰，康雪晴，蓝秀万，梁晓乐，梁莹，何志义

《基因组学与应用生物学》

2016

基于线粒体控制区Dloop序列的长臀种群遗传结构分析

谢少林，王超，吕子君，李正光，石忍耐，邹记兴

《华南农业大学学报》

2010

柽柳bZIP基因调控耐盐相关基因的表达

吴英杰，王超，及晓宇，王留强，王玉成

《植物生理学报》

2009

DICE:电压门控离子通道电生理实验数据库

郭景康，梁茜，王超，李泽，张国庆，李亦学，孙晓明，王健

《生物信息学》

2006

GmHSFA1基因克隆及其过量表达提高转基因大豆的耐热性

陈晓军，叶春江，吕慧颖，徐民新，李葳，张利明，王超，罗淑萍，朱保葛

《遗传》

2000

植物多倍体起源与分子进化研究进展

王超，张宗申，王建波

《植物科学学报》

精选作品

期刊论文

CHD1L maintains genome integrity by facilitating okazaki fragment maturation

绵羊乳脂沉积关键基因筛选及lncRNA-miRNA-mRNA调控网络构建

盐碱地中不同倍性小麦根际和根内丛枝菌根真菌特征的比较分析

USP37 counteracts HLTF to protect damaged replication forks and promote survival of BRCA1-deficient cells and PARP inhibitor resistance

Cell cycle progression of under-replicated cells

基于生物信息学技术筛选脑出血的差异基因和药物及转录因子预测

基于转录组学分析红小豆热加工蛋白水解物的降脂机理

山新杨PdaYABBY1基因克隆及表达分析

机器学习识别LRRC15和MICB为类风湿关节炎的免疫诊断标志物

DePARylation is critical for S phase progression and cell survival

In vivo CRISPR screens identify Mga as an immunotherapy target in triple-negative breast cancer

Systematic investigation of BRCA1-A, -B, and -C complexes and their functions in DNA damage response and DNA repair

基于生物信息学方法分析麻醉药对乳腺癌基因表达的影响

基于生物信息学的通心络胶囊治疗急性心肌梗死的研究（英文）

基于转录组学探讨可视化针刀治疗股骨头坏死疼痛触发点模型比格犬的作用机制

CD36抗原缺失Ⅰ型4种碱基突变及蛋白结构生物信息学分析

RAD54L2-mediated DNA damage avoidance pathway specifically preserves genome integrity in response to topoisomerase 2 poisons

Genome-Wide CRISPR Screens Reveal ZATT as a Synthetic Lethal Target of TOP2-Poison Etoposide That Can Act in a TDP2-Independent Pathway

FACS-based genome-wide CRISPR screens define key regulators of DNA damage signaling pathways

基于生物信息学和机器学习探究生物钟相关基因在代谢相关性肝病中的表达及其意义

Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors

TDP1-independent pathways in the process and repair of TOP1-induced DNA damage

Histone chaperone ASF1 acts with RIF1 to promote DNA end joining in BRCA1-deficient cells

Integrated screens uncover a cell surface tumor suppressor gene KIRREL involved in Hippo pathway

山新杨LTP家族基因生物信息学及表达模式分析

小麦Lhc基因家族鉴定与表达模式分析

山新杨FLA家族基因生物信息学分析及其组织表达

山荆子WAK类受体激酶基因家族鉴定与表达分析

刚毛柽柳ThZFP3基因的克隆及表达特征分析

苹果和梨LysM-RLK响应腐烂病信号成员鉴定

Comprehensive analysis of the host-virus interactome of SARS-CoV-2

Interactomes of SARS‐CoV‐2 and human coronaviruses reveal host factors potentially affecting pathogenesis

Genetic vulnerabilities upon inhibition of DNA damage response

Genome-wide CRISPR screens reveal cyclin C as synthetic survival target of BRCA2

基于生物信息学分析整合组方规律发掘白脉软膏治疗白脉病的作用机制及其功效组配伍特点

CRISPR/CAS9-based DNA damage response screens reveal gene-drug interactions

Genome-wide CRISPR screen uncovers a synergistic effect of combining Haspin and Aurora kinase B inhibition

C17orf53 is identified as a Novel Gene Involved in Inter-strand Crosslink Repair

ATR inhibition potentiates ionizing radiation‐induced interferon response via cytosolic nucleic acid‐sensing pathways

DNA polymerase ι compensates for Fanconi anemia pathway deficiency by countering DNA replication stress

FOXK1 Participates in DNA Damage Response by Controlling 53BP1 Function

生物信息学预测类风湿关节炎核心基因与互作miRNA

刚毛柽柳ThZFP1基因的克隆和表达分析

朝仓花椒转录组密码子偏好性分析

SLX4IP acts with SLX4 and XPF–ERCC1 to promote interstrand crosslink repair

基于机器学习的植物表型基因的文献分类及其应用

副猪嗜血杆菌血清4型不同菌株间毒力相关基因验证及LpxC基因生物信息学分析

高通量测序解析微生物肥料对红壤有机农田土壤微生物群落的影响

Replisome Dynamics and Their Functional Relevance upon DNA Damage through the PCNA Interactome

Genome-wide CRISPR screens reveal synthetic lethality of RNASEH2 deficiency and ATR inhibition

羊草14-3-3蛋白基因的克隆及其在Na2CO3胁迫下的表达分析

大豆肌醇加氧酶基因响应线虫胁迫的表达分析

紫苏HPPR基因启动子的克隆及植物表达载体构建

羊种布氏杆菌3型Omp25基因序列及其表达蛋白生物信息学分析

一例副猪嗜血杆菌的分离鉴定及16S rRNA生物信息学分析

基于转录组测序的马尔尼菲青霉菌实时荧光定量PCR内参基因筛选与鉴定

基于线粒体控制区Dloop序列的长臀种群遗传结构分析

柽柳bZIP基因调控耐盐相关基因的表达

DICE:电压门控离子通道电生理实验数据库

GmHSFA1基因克隆及其过量表达提高转基因大豆的耐热性

植物多倍体起源与分子进化研究进展

会议论文

高通量沉默子鉴定技术的开发及其在猪产肉性状遗传机制解析中的应用

基于生物信息学的通心络胶囊对急性心肌梗死治疗潜力的研究

circRNA-miRNA-mRNA轴在AFB1诱导肺上皮细胞恶性转化中的调控作用机制研究

Identification and characterization of ZIP transporters from dwarf polish wheat(Triticum polonicum L.)

Transcriptome-wide identification and expressed analyses of ABC transporters in dwarf polish wheat under metal stresses

Seven BAC/BIBAC libraries of maize,its wild relatives,and closely related species for functional and comparative genomics studies of maize and cereals

植物网格蛋白功能鉴定与分析

基于COI基因序列的7种金线鱼属鱼类分子进化关系

柽柳eIF-5A基因耐盐功能分析

预印本

GENERator: A Long-Context Generative Genomic Foundation Model

Structure-Enhanced Protein Instruction Tuning: Towards General-Purpose Protein Understanding with LLMs

ProtChatGPT: Towards Understanding Proteins with Large Language Models

TOPO: Improving remote homologue recognition via identifying common protein structure framework

Optimizing weights of protein energy function to improve ab initio protein structure prediction

Looking for packing units of the protein structure