董志诚｜广州大学｜学者主页

2026

RNA Interference Silences Genes at Post-Transcriptional Level Without Impacting Nascent RNA in Soybean Hairy Roots

Li Jiang, Jinfeng Pang, Qianyue Bai, Jian Wei, Zhicheng Dong

Plants

DOI

2026

Pan-genomic and transcriptomic analyses reveal subfunctionalization of CBP/p300-like histone acetyltransferases in soybean seed development

Ce Wang, Dan Huang, Zhicheng Dong, Yan Chen

BMC Plant Biology

DOI

2026

Transposable element-driven expansion of enhancer RNA repertoires underlies regulatory innovation and polyploid adaptation in cereal crops

Jinyi Liu, Zijuan Li, Shuang Zhao, Hao Li, Bo Zhang, Chenghong Liu, Wenli Zhang, Hude Mao, Lin Huang, Zhicheng Dong, Yijing Zhang, Yan Chen

Plant Communications

DOI

2026

Subcellular transcriptomics reveals the coupling of transcript splicing and chromatin release in Arabidopsis

Yutong Ye, Huilin Peng, Xuefu Lin, Yinghe Jiang, Zhicheng Dong, Min Liu

Scientia Sinica Vitae

DOI

2026

Epigenetic Rewiring Shapes Divergent Genome Plasticity in Virus Response Circuitry in Soybean

Ting Fang, Wenxuan Huang, Yueying Wu, Guozheng Xiao, Y. J. Xue, Min Liu, Jingyu Peng, Xinlei Liu, Jingjing Hou, Zhicheng Dong, Meixia Zhao, Lianjun Sun

Plant Cell & Environment

DOI

2025

Natural variation in histone demethylase GmLDL2 confers flowering time divergence for geographical expansion in soybean

Mengshi Liu, Yuan Fang, Jiacan Jiang, Huaizhen Chen, Bing Yang, Xiaomin Xu, Guoqiang Liu, Chen Ling, Zhicheng Dong, Cunyi Yang, Yingxiang Wang

Nature Communications

DOI

2025

Genome-wide identification and characterization of soybean GH9 endo-1,4-β-glucanases

Weimin Zhan, Huijuan Huang, Zaipan Cai, Zhenwei Zhao, Xuefu Lin, Yize Peng, Zhicheng Dong, Di Qin, Jiang Li

Frontiers in Plant Science

DOI

2025

LRM3 positively regulates stem lodging resistance by degradating MYB6 transcriptional repressor in soybean

Yongheng Ye, Zhi-Yuan Cheng, Xinjing Yang, Su-Xin Yang, Kuanqiang Tang, Hui Yu, Jin-Shan Gao, Yao-Hua Zhang, Jian-Tian Leng, Wei Zhang, Ye Zhang, Mo-Ran Bu, Zheng-Wei Liang, Zhicheng Dong, Zhonghui Zhang, Xian-Zhong Feng

Plant Biotechnology Journal

DOI

2024

RNA聚合酶Ⅱ大亚基羧基末端结构域：简单重复不简单

李淇，董志诚，刘敏

《遗传》

2024

拟南芥和大豆中用于RNA研究的细胞核制备和优化

何思豪，苏京，董志诚，刘敏，朱家富

《植物生理学报》

2024

The carboxy-terminal domain of RNA polymerase II large subunit: simple repeats are not simple.

Qi Li, Zhicheng Dong, Min Liu

PubMed

DOI

2024

Control of DNA demethylation by superoxide anion in plant stem cells

Shiwen Wang, Min Liu, Dongping Hu, Zhicheng Dong, Zhong Zhao

Nature Chemical Biology

DOI

2024

Monitoring transcription by nascent RNA sequencing in crop plants

Mingliang Zhu, Min Liu, Zhicheng Dong

New Crops

DOI

2023

Tn5转座酶融合蛋白在CUT&Tag实验中的优化及评价

刘晟宇，刘晓斌，朱家富，苏京，董志诚，刘敏

《植物学报》

2023

LHP1-mediated epigenetic buffering of subgenome diversity and defense responses confers genome plasticity and adaptability in allopolyploid wheat

Zijuan Li, Yuyun Zhang, Yuyun Zhang, Ci‐Hang Ding, Yan Chen, Haoyu Wang, Jinyu Zhang, Songbei Ying, Meiyue Wang, Rongzhi Zhang, Jinyi Liu, Yilin Xie, Tengfei Tang, Huishan Diao, Luhuan Ye, Yili Zhuang, Wan Teng, Bo Zhang, Lin Huang, Yi‐Ping Tong, Wenli Zhang, Genying Li, Moussa Benhamed, Zhicheng Dong, Jin‐Ying Gou, Yijing Zhang, Yijing Zhang

Nature Communications

DOI

2023

The role of histone acetylation in transcriptional regulation and seed development

Yan Chen, Peiguo Guo, Zhicheng Dong

PLANT PHYSIOLOGY

DOI

2023

Transposable element-initiated enhancer-like elements generate the subgenome-biased spike specificity of polyploid wheat

Yilin Xie, Songbei Ying, Zijuan Li, Yue Zhang, Yu’e Zhang, Jiafu Zhu, Jinyu Zhang, Meiyue Wang, Huishan Diao, Haoyu Wang, Yuyun Zhang, Yili Zhuang, Luhuan Ye, Yili Zhuang, Fei Zhao, Wan Teng, Wenli Zhang, Zhicheng Dong, Jungnam Cho, Zhicheng Dong, Yongbiao Xue, Yijing Zhang, Yijing Zhang

Nature Communications

DOI

2023

Comparative analysis of nascent RNA sequencing methods and their applications in studies of cotranscriptional splicing dynamics

Min Liu, Jiafu Zhu, Huijuan Huang, Yan Chen, Zhicheng Dong

The Plant Cell

DOI

2023

DDM1-mediated R-loop resolution and H2A.Z exclusion facilitates heterochromatin formation in Arabidopsis

Jincong Zhou, Xue Lei, Sarfraz Shafiq, Weifeng Zhang, Qin Li, Kuan Li, Jiafu Zhu, Zhicheng Dong, Xin‐Jian He, Qianwen Sun

Science Advances

DOI

2023

OsTOC1 plays dual roles in the regulation of plant circadian clock by functioning as a direct transcription activator or repressor

Jing Li, Jia-Xin Qiu, Qing-Hua Zeng, Yi Zhuang, Ning Zhang, Shuxuan Xu, Jian Jin, Zhicheng Dong, Liang Chen, Wei Huang

Cell Reports

DOI

2022

Protocol for affordable and efficient profiling of nascent RNAs in bread wheat using GRO-seq

Yan Chen, Jiafu Zhu, Yilin Xie, Zijuan Li, Yijing Zhang, Min Liu, Zhicheng Dong

STAR Protocols

DOI

2022

Environmental factors have a major effect in shaping the gene expression of Siberian larch in the Altai Mountains of China

Min Liu, Xiaobin Liu, Peng Zhou, Shaowei Jiang, Jian‐Guo Huang, Zhicheng Dong

The Plant Genome

DOI

2022

Functional Characterization of the Lysine-Specific Histone Demethylases Family in Soybean

Mengshi Liu, Jiacan Jiang, Yapeng Han, Mengying Shi, Xianli Li, Yingxiang Wang, Zhicheng Dong, Cunyi Yang

Plants

DOI

2022

Enhancer transcription detected in the nascent transcriptomic landscape of bread wheat

Yilin Xie, Yan Chen, Zijuan Li, Jiafu Zhu, Min Liu, Yijing Zhang, Zhicheng Dong

Genome biology

DOI

2021

Radial growth of Larix sibirica was more sensitive to climate at low than high altitudes in the Altai Mountains, China

Peng Zhou, Jian-Guo Huang, Hanxue Liang, Sergio Rossi, Yves Bergeron, Vladimir V. Shishov, Shaowei Jiang, Jian Kang, Huoxing Zhu, Zhicheng Dong

Agricultural And Forest Meteorology，Vol. 304

DOI

2021

FT5a interferes with the Dt1‐AP1 feedback loop to control flowering time and shoot determinacy in soybean

Lin Yue, Xiaoming Li, Chao Qi Fang, Liyu Chen, Hui Yang, Jie Yang, Zhonghui Chen, Haiyang Nan, Linnan Chen, Yuhang Zhang, Haiyang Li, Xingliang Hou, Zhicheng Dong, James L. Weller, Jun Abe, Baohui Liu, Fanjiang Kong

Journal of Integrative Plant Biology

DOI

2021

Oil crops: From the classical traits to genetic improvement

Zhicheng Dong, Zhixi Tian, Baohui Liu

Journal of Integrative Plant Biology

DOI

2021

Endogenous stress-related signal directs shoot stem cell fate in Arabidopsis thaliana

Jian Zeng, Xiang Li, Qiang Ge, Zhicheng Dong, Linjie Luo, Zhaoxia Tian, Zhong Zhao

Nature Plants

DOI

2021

Cotranscriptional and Posttranscriptional Features of the Transcriptome in Soybean Shoot Apex and Leaf

Jiafu Zhu, Han Qing Zhao, Fanjiang Kong, Baohui Liu, Min Liu, Zhicheng Dong

Frontiers in Plant Science

DOI

2021

Preferential Ribosome Loading on the Stress-Upregulated mRNA Pool Shapes the Selective Translation under Stress Conditions

Yan Chen, Min Liu, Zhicheng Dong

Plants

DOI

2020

Immediate transcriptional responses of Arabidopsis leaves to heat shock

Min Liu, Jiafu Zhu, Zhicheng Dong

Journal of Integrative Plant Biology

DOI

2020

WUSCHEL triggers innate antiviral immunity in plant stem cells

Haijun Wu, Xiaoya Qu, Zhicheng Dong, Linjie Luo, Chen Shao, Joachim Forner, Jan U. Lohmann, Meng Su, Mengchu Xu, Xiaobin Liu, Lei Zhu, Jian Zeng, Sumei Liu, Zhaoxia Tian, Zhong Zhao

Science

DOI

2020

Transcriptome analyses provide insights into development of the Zingiber zerumbet flower, revealing potential genes related to floral organ formation and patterning

Tong Zhao, Chelsea Dvorak Specht, Zhicheng Dong, Yushi Ye, Huanfang Liu, Jingping Liao

Plant Growth Regulation

DOI

2019

Mapping genome-wide binding sites of endosperm specific expression transcription factor O2 using DAP-Seq

Zhicheng Dong, Jianhui Wang, Pibiao Shi, Han Qing Zhao, Lihua Ning, Chushan Wu

Chinese Science Bulletin (Chinese Version)

DOI

2018

Transfer RNA-derived small RNAs in plants

Lei Zhu, David W.Ow, Zhicheng Dong

Science China Life Sciences

2018

RNA polymerase II activity revealed by GRO-seq and pNET-seq in Arabidopsis

Jiafu Zhu, Min Liu, Xiaobin Liu, Zhicheng Dong

Nature Plants

DOI

2018

LjCOCH interplays with LjAPP1 to maintain the nodule development in Lotus japonicus

Yu-Chen Liu, Y. Lei, Wei Liu, Lin Weng, Mingjuan Lei, Xiao-He Hu, Zhicheng Dong, D. Luo, Jun Yang

Plant growth regulation (Print)

DOI

2016

主要经济作物分子设计育种

冯献忠，何玉科，区永祥，张骁，穆建新，魏爱民，董志诚

《植物生理学报》

2005

Floral Patterning in Lotus japonicus1[w]

Zhicheng Dong, Zhong Zhao, Cheng-Wu Liu, Jiang-Hong Luo, Jun Yang, Wei-Hua Huang, Xiao-He Hu, Trevor L. Wang, D. Luo

Plant Physiology

DOI

精选作品

期刊论文

RNA Interference Silences Genes at Post-Transcriptional Level Without Impacting Nascent RNA in Soybean Hairy Roots

Pan-genomic and transcriptomic analyses reveal subfunctionalization of CBP/p300-like histone acetyltransferases in soybean seed development

Transposable element-driven expansion of enhancer RNA repertoires underlies regulatory innovation and polyploid adaptation in cereal crops

Subcellular transcriptomics reveals the coupling of transcript splicing and chromatin release in Arabidopsis

Epigenetic Rewiring Shapes Divergent Genome Plasticity in Virus Response Circuitry in Soybean

Natural variation in histone demethylase GmLDL2 confers flowering time divergence for geographical expansion in soybean

Genome-wide identification and characterization of soybean GH9 endo-1,4-β-glucanases

LRM3 positively regulates stem lodging resistance by degradating MYB6 transcriptional repressor in soybean

RNA聚合酶Ⅱ大亚基羧基末端结构域：简单重复不简单

拟南芥和大豆中用于RNA研究的细胞核制备和优化

The carboxy-terminal domain of RNA polymerase II large subunit: simple repeats are not simple.

Control of DNA demethylation by superoxide anion in plant stem cells

Monitoring transcription by nascent RNA sequencing in crop plants

Tn5转座酶融合蛋白在CUT&Tag实验中的优化及评价

LHP1-mediated epigenetic buffering of subgenome diversity and defense responses confers genome plasticity and adaptability in allopolyploid wheat

The role of histone acetylation in transcriptional regulation and seed development

Transposable element-initiated enhancer-like elements generate the subgenome-biased spike specificity of polyploid wheat

Comparative analysis of nascent RNA sequencing methods and their applications in studies of cotranscriptional splicing dynamics

DDM1-mediated R-loop resolution and H2A.Z exclusion facilitates heterochromatin formation in Arabidopsis

OsTOC1 plays dual roles in the regulation of plant circadian clock by functioning as a direct transcription activator or repressor

Protocol for affordable and efficient profiling of nascent RNAs in bread wheat using GRO-seq

Environmental factors have a major effect in shaping the gene expression of Siberian larch in the Altai Mountains of China

Functional Characterization of the Lysine-Specific Histone Demethylases Family in Soybean

Enhancer transcription detected in the nascent transcriptomic landscape of bread wheat

Radial growth of Larix sibirica was more sensitive to climate at low than high altitudes in the Altai Mountains, China

FT5a interferes with the Dt1‐AP1 feedback loop to control flowering time and shoot determinacy in soybean

Oil crops: From the classical traits to genetic improvement

Endogenous stress-related signal directs shoot stem cell fate in Arabidopsis thaliana

Cotranscriptional and Posttranscriptional Features of the Transcriptome in Soybean Shoot Apex and Leaf

Preferential Ribosome Loading on the Stress-Upregulated mRNA Pool Shapes the Selective Translation under Stress Conditions

Immediate transcriptional responses of Arabidopsis leaves to heat shock

WUSCHEL triggers innate antiviral immunity in plant stem cells

Transcriptome analyses provide insights into development of the Zingiber zerumbet flower, revealing potential genes related to floral organ formation and patterning

Mapping genome-wide binding sites of endosperm specific expression transcription factor O2 using DAP-Seq

Transfer RNA-derived small RNAs in plants

RNA polymerase II activity revealed by GRO-seq and pNET-seq in Arabidopsis

LjCOCH interplays with LjAPP1 to maintain the nodule development in Lotus japonicus

主要经济作物分子设计育种

Floral Patterning in Lotus japonicus1[w]

会议论文

Redox regulation of plant stem cell fate

预印本

GRF5 mediates circadian clock to gate seed quality in soybean

KEEL LOSS1 Regulates Petal Number Along the Floral Dorsoventral Axis in Lotus Japonicus and Pisum Sativum