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Hanyue Guo, Qi-Cheng Xu, He Zhang, Yi-Zhu Qiao, Yang Song, Yinghua Duan, Ning Ling, Qirong Shen (2026). Single-cell assembled genomes predict enhanced bacterial metabolic cross-feeding potential in carbon-enriched soils. The ISME Journal.DOI
Jiyu Xie, Xinli Sun, Viktor Hesselberg-Thomsen, Kun Duan, Huihui Zhang, Weibing Xun, Nan Zhang, M. L. Strube, Qirong Shen, Á. Kovács, Rui-Fu Zhang, Zhi-Hui Xu (2026). Metabolic exchange and siderophore sharing underlie emergent biofilm synergism. bioRxiv.DOI
Mi Ding, Guan Pang, Mengting Huang, Yujie Shi, Fan Yi, Pao-Lo Wong, Dong-Xin Shi, Zhilin Yuan, Lanxi Su, Jun-Jie Guo, Weixiang Wang, O. Yarden, Feng M. Cai, Irina S. Druzhinina, Qirong Shen (2026). Regulatory adaptation of an accessory gene controls fungal halotolerance and niche expansion. The ISME Journal.DOI
Jixing Zeng, Rong-Feng Wang, Zechen Gu, Jia Li, Mengting Huang, Qirong Shen, Min Wang, Shi-Wei Guo (2026). Nitrate‐constructed fungal communities and rhizosphere metabolites confer resistance to Fusarium wilt in cucumber. New Phytologist.DOI
Zhiyi Zhu, Peigen Li, Xue Han, Simin Liu, Runze Hu, Yu-Jie Zhao, Yujie Shi, Xin-Juan Xu, Tian-Jie Yang, Yang-Chun Xu, Cai-Xia Dong, Qirong Shen (2026). Pseudomonas sp. CD1-mediated fermentation valorization of steviol glycoside production waste liquor and construction of a plant growth-promoting salt-tolerant formulation. Industrial crops and products (Print).DOI
Xin Pei, Na Zhang, Xu-Hui Deng, Ruo-Chen Li, Yan-Jie Wang, Ying Wang, Wanting Huang, Yang Yue, S. Geisen, Zhilei Gao, Sai Guo, Dong-Lan Tian, Qirong Shen, G. Kowalchuk, Rong Li (2026). Biofertilizer induces soil disease suppression by activating pathogen suppressive protist taxa. npj Biofilms and Microbiomes.DOI
Zhi-Jian Kong, Zhangxin Yan, Tuo Li, Lifang Chai, Dabing Xu, Dong-Yang Liu, Qirong Shen (2026). Synergistic humification in straw composting driven by lytic polysaccharide monooxygenase: Insights into enzymatic degradation and microbial interactions. Bioresource Technology.DOI
Jia-Le Ma, ShiJie Xiang, Si-Hang Liu, Ming-Gen Cheng, Ji-Guo Qiu, Jian He, Zongzhuan Shen, Jiandong Jiang, Qirong Shen (2026). Brevibacillus soli sp. nov., a Siderophore and IAA-Producing Strain Isolated from Soil. Current Microbiology.DOI
Yizhu Qiao, Tingting Wang, He Zhang, Qicheng Xu, Yang Ruan, Qirong Shen, Ning Ling (2026). Decoding microbial metabolic complementarity from individual traits to community structuring. Ecology.DOI
He Zhang, Qicheng Xu, Yang Ruan, Qiwei Huang, Shiwei Guo, Yakov V. Kuzyakov, Qirong Shen, Ning Ling (2026). Active microbiome succession in the rhizosphere of growing plants.DOI
Zihao Wei, Hao Cao, Chao Wang, Hongjun Liu, Qirong Shen, R. H. Li (2026). Exploration of Acid-Tolerant Peanut Varieties Associated with Key Beneficial Rhizosphere Microbiome and Their Plant Growth-Promoting Effects in Acidic Soil. Agronomy.DOI
Xinli Sun, Riyan Xia, Jiyu Xie, Kun Duan, Weibing Xun, Nan Zhang, Guidong Huang, Ruifu Zhang, Qirong Shen, Kai Wu, Zhihui Xu (2025). Cooperative Interactions Between Bacillus and Lysobacter Enhance Consortium Stability and Fusarium Wilt Suppression in Cucumber. Microbial Ecology, Vol. 880, No. 10.DOI
Yuntao Zhang, Yang Ruan, Qicheng Xu, Ning Ling, Qirong Shen (2025). Manure application primarily drives changes in antibiotic resistome composition rather than abundance in agricultural soil profile. Journal Of Environmental Management, Vol. 382.DOI
Xinli Sun, Zhi-Hui Xu, Nan Zhang, Yun-Peng Liu, Weibing Xun, Youzhi Miao, Jia-Hui Shao, Rui-Fu Zhang, Qirong Shen (2025). Bacillus velezensis SQR9: a model biofertilizer strain for beneficial plant root-rhizobacterium interaction. Science China Life Sciences.DOI
Xia-Yan Pan, Yang Yue, Feng-Juan Zhao, Tianqiao Song, Boting Xu, Zhi Li, Zhong-Qiang Qi, Jun-Jie Yu, Hui-Juan Cao, Mi-Na Yu, Qirong Shen, Jin-Rong Xu, Wu Xiong, Yong-Feng Liu (2025). Rhizosphere microbes facilitate the break of chlamydospore dormancy and root colonization of rice false smut fungi. Cell Host and Microbe.DOI
Yu Lv, Qi Zhang, LE Liu, Jian He, Shimei Wang, Qirong Shen (2025). Uliginosibacterium silvisoli sp. nov., Isolated from Subtropical Forest Soil in Hunan Province, China. Current Microbiology.DOI
Enyi Wang, Le Chen, Leyun Dong, Jian He, Zongzhuan Shen, Jian-Dong Jiang, Qirong Shen (2025). Lentibacillus songyuanensis sp. nov., A Drought- and Salt- Tolerant Bacterium with Ability to Degrade Aniline Blue Isolated from Saline-Alkali Soil. Current Microbiology.DOI
Enyi Wang, Jia-Le Ma, ShiJie Xiang, Jian He, Zongzhuan Shen, Jian-Dong Jiang, Qirong Shen (2025). Huijunlia imazamoxiresistens gen. nov., sp. nov., isolated from farmland represents a novel taxon within the family Chitinophagaceae. International Journal of Systematic and Evolutionary Microbiology.DOI
Yan Wu, Leyun Dong, Bingbing Weng, Xiao-Long Shi, N. Wu, Jian He, Zongzhuan Shen, Jian-Dong Jiang, Qirong Shen (2025). Paenibacillus nanchangensis sp. nov., a Nitrogen-Fixing Strain Isolated from Agricultural Soil. Current Microbiology.DOI
Ying Zhou, Lu Xu, Jia-Le Ma, Yu Lv, Qi Zhang, Jian-Dong Jiang, Ji-Guo Qiu, Zongzhuan Shen, Qirong Shen (2025). Chryseobacterium tongliaoense sp. nov., an aniline blue-degrading strain isolated from agricultural soil. Antonie van Leeuwenhoek.DOI
Lv Su, Haichao Feng, Huatai Li, Fu Yang, Xiaoqian Yan, Xudong Wang, Pengcheng Li, Kesu Wang, Xia Shu, Yunpeng Liu, Qirong Shen, Y. C. Yan, Ruifu Zhang (2025). General variation in the Fusarium wilt rhizosphere microbiome. Nature Communications.DOI
Yuting Wang, Yongneng Wei, Gangsheng Wang, Yang Ruan, Ling Li, Mu Liu, Yunfeng Yang, Qirong Shen, Ning Ling (2025). Hump‐Shaped Relationship Between Microbial Carbon Use‐Efficiency and Soil Organic Carbon in Alpine Grasslands. Advanced Science.DOI
Xiaojie Hu, Youying Sheng, Yanxing Xu, Xitong Li, Chao Qin, Qirong Shen, Yanzheng Gao (2025). Type- and Treatment Duration-Dependent Efficacy of Metal–Organic Frameworks for Combating Antibiotic Resistance Genes in Real Wastewater. Environmental Science & Technology.DOI
Taimeng Tan, Lili Tao, Yuling Zhang, Pascale B. Beauregard, Xinli Sun, Youzhi Miao, Nan Zhang, Weibing Xun, Wei Ran, Baolei Jia, Ruifu Zhang, Qirong Shen, Zhihui Xu (2025). The Volatile Pentadecane From Bacillus Alleviates Plant Iron Deficiency Through Activating the Reduction‐Based Fe Uptake System. Plant Biotechnology Journal.DOI
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Qi Gao, Dongyang Wang, Hong Mei Zhu, Xinpeng Li, Yi Hua Jiang, Rong Li, Zhenzhong Yu, Qirong Shen, Biao Shen, Jian Zhang (2025). A Zn2-Cys6 transcription factor, TgZct4, reprograms antioxidant activity in the fungus Trichoderma guizhouense to defend against oxidative stress. Communications Biology.DOI
Linhua Cao, Xiaoteng Shi, Li Tuo, Yang Liu, Tao Wang, Bozheng Lin, Dongyang Liu, Qirong Shen (2025). Thaldh3-Dependent GABA Metabolism Modulates Response of Trichoderma to Fusaric Acid-Induced Oxidative Stress. Journal of Fungi.DOI
Yifan Li, Huanhong Lu, Degang Guo, Xiaoyan Li, Fei Qi, Jian Zhang, Rainer Fischer, Qirong Shen, Zhenzhong Yu (2025). Light controls gene functions through alternative splicing in fungi. Proceedings of the National Academy of Sciences.DOI
Lili Tao, Xinli Sun, Pascale B. Beauregard, Taimeng Tan, Yuling Zhang, Jiyu Xie, Guidong Huang, Nan Zhang, Youzhi Miao, Qirong Shen, Zhihui Xu, Ruifu Zhang (2025). Amino Acids From Root Exudates Induce Bacillus Spore Germination to Enhance Root Colonisation and Plant Growth Promotion. Microbial Biotechnology.DOI
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Haiyan Wu, Shanguo Chen, Yu Deng, Jiahui Shen, Yifei Xu, Tao Wen, Jun Jie Yuan, Qirong Shen, Chao Xue (2025). Dynamics of antibiotic resistance genes and the bacterial community after stress from a single Dazomet fumigation. Environmental Pollution.DOI
He Zhang, Yang Ruan, Yakov V. Kuzyakov, Hong Sun, Qiwei Huang, Shiwei Guo, Qirong Shen, Ning Ling (2025). Viruses Facilitate Energy Acquisition Potential by Their Bacterial Hosts in Rhizosphere of Grafted Plants. Plant Cell & Environment.DOI
Tuo Li, Xiaoteng Shi, Jiaguo Wang, Yihao Zhou, Tao Wang, Yan Xu, Zhihui Xu, Waseem Raza, Dongyang Liu, Qirong Shen (2025). Turning antagonists into allies: Bacterial-fungal interactions enhance the efficacy of controlling Fusarium wilt disease. Science Advances.DOI
Xu Xu, Xinling Wang, Ting Sun, Shanshan Liu, Menghui Dong, Yue Yang, Yi Min, Alexandre Jousset, Xian Xiao, Shu-Wei Liu, Stefan Geisen, Valentyna Krashevska, Qirong Shen, Stefan Scheu, Rong Li (2025). Interactions Between Bacterivorous Nematodes and Bacteria Reduce N 2 O Emissions. Advanced Science.DOI
Yifan Cao, Yannan Ou, Nana Lv, Chengyuan Tao, Hongjun Liu, Rong Li, Zongzhuan Shen, Qirong Shen (2024). Soil nutrient levels are associated with suppression of banana Fusarium wilt disease. Soil Ecology Letters, Vol. 60, No. 40.DOI
Waseem Raza, Gaofei Jiang, Nico Eisenhauer, Yishuo Huang, Zhong Wei, Qirong Shen, George A. Kowalchuk, Alexandre Jousset (2024). Microbe-induced phenotypic variation leads to overyielding in clonal plant populations. Nature Ecology & Evolution, Vol. 80, No. 30.DOI
Xiao-Fang Wang, Yike Tang, Xiufeng Yue, Shuo Wang, Keming Yang, Yangchun Xu, Qirong Shen, Ville-Petri Friman, Zhong Wei (2024). The role of rhizosphere phages in soil health. FEMS Microbiology Ecology.DOI
Pan Wang, Bin Xia, Zhiyuan Chen, Jiyu Xie, Xinli Sun, Qingyun Tian, Chun-Hui Gao, Weibing Xun, Nan Zhang, Rui-Fu Zhang, Qirong Shen, Zhi-Hui Xu (2024). An Approach to Constructing Multispecies Biofilm Communities from Rhizosphere Soil. Journal of Visualized Experiments.DOI
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M. Huang, Yihe Zhang, Qi-Dong Yu, Si-Yan Qian, Yue Shi, Nan Zhang, A. Michelsen, Jin-Bo Zhang, Christoph Müller, Shu-Qing Li, Rui-Fu Zhang, Qirong Shen, Jianwen Zou (2024). Bacillus velezensis SQR9-induced ammonia-oxidizing bacteria stimulate gross nitrification rates in acidic soils. Agriculture, Ecosystems & Environment. Applied Soil Ecology.DOI
Chaohong Shi, Penghao Xie, Zhexu Ding, Guoqing Niu, Tao Wen, Wenjie Gu, Yu-Sheng Lu, Fengyin Wang, Wan-Ling Li, Jianguo Zeng, Qirong Shen, Jun Yuan (2024). Inhibition of pathogenic microorganisms in solid organic waste via black soldier fly larvae-mediated management. Science of the Total Environment.DOI
Tingting Li, Yan-Nan Ou, Shuqin Ling, Ming Gao, Xu-Hui Deng, Hong-Jun Liu, Rong Li, Zong-Zuan Shen, Qirong Shen (2024). Suppressing Ralstonia solanacearum and Bacterial Antibiotic Resistance Genes in Tomato Rhizosphere Soil through Companion Planting with Basil or Cilantro. Agronomy.DOI
Haiyan Wu, Shanguo Chen, Lin Zhu, Yifei Xu, Jing Li, N. Ling, Jun Yuan, Chao Xue, Qirong Shen (2024). Identification of antibiotic resistant bacteria communities and a GeoChip based study of resistome in Fusarium wilt diseased and healthy soil. Agriculture, Ecosystems & Environment. Applied Soil Ecology.DOI
Yang Ruan, Ning Ling, Shengjing Jiang, Xin Jing, Jin He, Qirong Shen, Zhibiao Nan (2024). Author response: Warming and altered precipitation independently and interactively suppress alpine soil microbial growth in a decadal-long experiment.DOI
Xueting Jiang, Luyao Ruan, N. Wu, Dongmei Mao, Jian He, Shimei Wang, Jian-Dong Jiang, Qirong Shen (2024). Dongia sedimenti sp. nov., isolated from river sediment. International Journal of Systematic and Evolutionary Microbiology.DOI
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LE Liu, Keke Geng, Yu Lv, Qi Zhang, Gang Chen, Dan Cheng, Jia-Hui Shao, Jian He, Qirong Shen (2024). Ruicaihuangia caeni gen. nov., sp. nov., a novel taxon within the family Microbacteriaceae isolated from sludge. International Journal of Systematic and Evolutionary Microbiology.DOI
Shiyu Zhao, Luyao Ruan, Dongmei Mao, Xueting Jiang, Yu Lv, Qi Zhang, Jian He, Qirong Shen (2024). Keguizhuia sedimenti gen. nov., sp. nov., isolated from river sediment represents a novel genus of the family Oxalobacteraceae. International Journal of Systematic and Evolutionary Microbiology.DOI
Lu Xu, Kexin Wang, Luyao Ruan, E. Chen, Songqi Yang, Ji-Guo Qiu, Jian-Dong Jiang, Jian He, Qirong Shen (2024). Ruixingdingia sedimenti gen. nov., sp. nov., a novel taxon within the family Paracoccaceae isolated from sediment of Qiantang River. International Journal of Systematic and Evolutionary Microbiology.DOI
Qi-Miao Xu, Bin Liu, Ying-Ying Wan, Xueting Jiang, Le Chen, Dongmei Mao, Gang Chen, Dan Cheng, Jian He, Qirong Shen (2024). Paenibacillus lacisoli sp. nov., a mesotrione-degrading strain isolated from lakeside soil. Antonie van Leeuwenhoek.DOI
Luyao Ruan, Enyi Wang, Xueting Jiang, Dongmei Mao, Dan Cheng, Jian He, Jian-Dong Jiang, Qirong Shen (2024). Yanghanlia caeni gen. nov., sp. nov., a novel taxon within the family Alcaligenaceae isolated from sludge of a pesticide-manufacturing factory. International Journal of Systematic and Evolutionary Microbiology.DOI
Tuo Li, Zhangxin Yan, Yu Sun, Xuan Hu, Chenglin Peng, Shujun Zhao, Dabing Xu, Dongyang Liu, Qirong Shen (2024). Inorganic and organic additives differently regulate compost microbiomes in response to heavy metals immobilization. Chemical Engineering Journal.DOI
Li Tuo, Qin Wang, Yang Liu, Jiaguo Wang, Han Zhu, Linhua Cao, Dongyang Liu, Qirong Shen (2024). Divergent roles of ADP-ribosylation factor GTPase-activating proteins in lignocellulose utilization of Trichoderma guizhouense NJAU4742. Biotechnology for Biofuels and Bioproducts.DOI
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Tuo Li, Zhangxin Yan, Zhijian Kong, Ronghua Pei, Xuan Hu, Dabing Xu, Dongyang Liu, Qirong Shen (2024). Unraveling the mechanism of shell powder as a potent additive for pathogens eradication in compost. Chemical Engineering Journal.DOI
Li Tuo, Yang Liu, Han Zhu, Linhua Cao, Yihao Zhou, Dongyang Liu, Qirong Shen (2024). Cellular ATP redistribution achieved by deleting Tgparp improves lignocellulose utilization of Trichoderma under heat stress. Biotechnology for Biofuels and Bioproducts.DOI
Peng He, Yuntao Zhang, Qirong Shen, Ning Ling, Zhibiao Nan (2023). Microbial carbon use efficiency in different ecosystems: A meta-analysis based on a biogeochemical equilibrium model. Global Change Biology.DOI
Wan-Ying Xie, Yi Yuan, Ya-Ting Wang, Dong-Yang Liu, Qirong Shen, Fang-Jie Zhao (2023). Hazard reduction and persistence of risk of antibiotic resistance during thermophilic composting of animal waste. Journal Of Environmental Management, Vol. 330.DOI
Yang Yue, Chen Liu, Boting Xu, Yijin Wang, Qihui Lv, Zeyuan Zhou, Rong Li, G. Kowalchuk, A. Jousset, Qirong Shen, Wu Xiong (2023). Rhizosphere shapes the associations between protistan predators and bacteria within microbiomes through the deterministic selection on bacterial communities. Environmental Microbiology.DOI
Ruirui Feng, Bo Sun, Shengkai Zhang, Erzheng Su, A. Kovalevsky, Feng Zhang, B. Bennett, Qirong Shen, Qun Wan (2023). Discovery of Novel Rhizoctonia solani DHFR Inhibitors as Fungicides Using Virtual Screening. Journal of Agricultural and Food Chemistry.DOI
Menghui Dong, E. Kuramae, Mengli Zhao, Rong Li, Qirong Shen, G. Kowalchuk (2023). Tomato growth stage modulates bacterial communities across different soil aggregate sizes and disease levels. ISME Communications.DOI
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Tuo Li, Xiang-Kai Zhang, Xuan-Qing Wang, Zhangxin Yan, Cheng-Lin Peng, Shu-Jun Zhao, Dabing Xu, Dong-Yang Liu, Qirong Shen (2023). Effect of inoculating thermophilic bacterial consortia on compost efficiency and quality. Waste Management.DOI
Jun Yuan, Tao Wen, Shengdie Yang, Chao Zhang, Mengli Zhao, Guoqing Niu, Penghao Xie, Xiaoyu Liu, Xinyuan Zhao, Qirong Shen, T. Bezemer (2023). Growth substrates alter aboveground plant microbial and metabolic properties thereby influencing insect herbivore performance. Science China Life Sciences.DOI
Haichao Feng, Ruixin Fu, Jiayu Luo, Xue-Yue Hou, Kun Gao, Lv Su, Yu Xu, Youzhi Miao, Yun-Peng Liu, Zhi-Hui Xu, Nan Zhang, Qirong Shen, Weibing Xun, Ruifu Zhang (2023). Listening to plant's Esperanto via root exudates: reprogramming the functional expression of plant growth-promoting rhizobacteria. New Phytologist.DOI
Yun-Peng Liu, Xia Shu, Lin Chen, Huihui Zhang, Haichao Feng, Xiting Sun, Qin Xiong, Guangqi Li, Weibing Xun, Zhi-Hui Xu, Nan Zhang, C. Pieterse, Qirong Shen, Ruifu Zhang (2023). Plant commensal type VII secretion system causes iron leakage from roots to promote colonization. Nature Microbiology.DOI
Rong Huang, Jia-Hui Shao, Zhi-Hui Xu, Yuqi Chen, Yun-Peng Liu, Dandan Wang, Haichao Feng, Weibing Xun, Qirong Shen, Nan Zhang, Ruifu Zhang (2023). A toxin-mediated policing system in Bacillus optimizes division of labor via penalizing cheater-like nonproducers. eLife.DOI
Xinrun Yang, Gao-Fei Jiang, Yao-Zhong Zhang, Ningqi Wang, Yu-Ling Zhang, Xiao-Fang Wang, Fangni Zhao, Yangchun Xu, Qirong Shen, Zhong Wei (2023). MBPD: A multiple bacterial pathogen detection pipeline for One Health practices. iMeta.DOI
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Yuchan Li, Xu-Hui Deng, Nan Zhang, Zongzhuan Shen, Rong Li, Qirong Shen, J. Salles (2023). Rhizosphere suppression hinders antibiotic resistance gene (ARG) spread under bacterial invasion. One Health.DOI
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Tao Wen, Zhexu Ding, L. Thomashow, Lauren E. Hale, Shengdie Yang, Penghao Xie, Xiaoyu Liu, Heqi Wang, Qirong Shen, Jun Yuan (2023). Deciphering the mechanism of fungal pathogen-induced disease-suppressive soil. New Phytologist.DOI
Penghao Xie, Shengdie Yang, Xiaoyu Liu, Tianyi Zhang, Xinyuan Zhao, Tao Wen, Jian Zhang, Chao Xue, Qirong Shen, Jun Yuan (2023). Learning from Seed Microbes: Trichoderma Coating Intervenes in Rhizosphere Microbiome Assembly. Microbiology spectrum.DOI
Yang Ruan, Y. Kuzyakov, Xiao-Yu Liu, Xu-Hui Zhang, Qi-Cheng Xu, Junjie Guo, Shi-Wei Guo, Qirong Shen, Yunfeng Yang, N. Ling (2023). Elevated temperature and CO2 strongly affect the growth strategies of soil bacteria. Nature Communications.DOI
Yifei Xu, Lin Zhu, Shanguo Chen, Hai-Yan Wu, Ruichen Li, Jing Li, Jun Yuan, Tao Wen, Chao Xue, Qirong Shen (2023). Risk assessment and dissemination mechanism of antibiotic resistance genes in compost. Environment International.DOI
Rong Li, Simone Weidner, Yan-Nan Ou, Wu Xiong, A. Jousset, Qirong Shen, G. Kowalchuk (2023). Co-occurrence networks depict common selection patterns, not interactions. Soil Science and Environment.DOI
S. Jiang, Han Li, Haiying Peng, Xin-Lan Mei, Ting-Su Chen, Yangchun Xu, C. Dong, Qirong Shen (2023). [Effects of partial substitution of chemical fertilizer with organic fertilizer on arbuscular mycorrhizal fungal community of Mangifera indica]. Ying yong sheng tai xue bao = The journal of applied ecology.DOI
Na-Na Lv, Chengyuan Tao, Yan-Nan Ou, Jia-Bao Wang, Xu-Hui Deng, Hong-Jun Liu, Zong-Zuan Shen, Rong Li, Qirong Shen (2023). Root-Associated Antagonistic Pseudomonas spp. Contribute to Soil Suppressiveness against Banana Fusarium Wilt Disease of Banana. Microbiology spectrum.DOI
Chengyuan Tao, Zhe Wang, Shan-Da Liu, Na-Na Lv, Xu-Hui Deng, Wu Xiong, Zongzhuan Shen, Nan Zhang, S. Geisen, Rong Li, Qirong Shen, G. Kowalchuk (2023). Additive fungal interactions drive biocontrol of Fusarium wilt disease. New Phytologist.DOI
Shengdie Yang, Hongwei Liu, Penghao Xie, Tao Wen, Qirong Shen, Jun Yuan (2023). Emerging Pathways for Engineering the Rhizosphere Microbiome for Optimal Plant Health. Journal of Agricultural and Food Chemistry.DOI
Luyao Ruan, LE Liu, Xueting Jiang, Dongmei Mao, Jia-Hui Shao, Jian He, Qirong Shen (2023). Empedobacter sedimenti sp. nov., isolated from sediment of East Taihu Lake. International Journal of Systematic and Evolutionary Microbiology.DOI
Lingxiao Liu, Ya Zhang, Qiuyu Chen, Qirong Shen, Ludan Li, Chengliang Cao, Rong-Peng Li, Ji-Hong Jiang, Jinjuan Liu (2023). Nocardioides potassii sp. nov., isolated from weathered potash tailings soil. International Journal of Systematic and Evolutionary Microbiology.DOI
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Xian Dong, Min Wang, Ning Ling, Qirong Shen, Shiwei Guo (2016). Effects of iron and boron combinations on the suppression of Fusarium wilt in banana. Scientific Reports.DOI
Honggui Wang, Zhong Wei, Lijuan Mei, Jingxin Gu, Suisui Yin, Suisui Yin, Karoline Faust, Jeroen Raes, Ye Deng, Yulong Wang, Qirong Shen, Shixue Yin, Shixue Yin (2016). Combined use of network inference tools identifies ecologically meaningful bacterial associations in a paddy soil. Soil Biology and Biochemistry.DOI
Jun Jie Yuan, Mengli Zhao, Rong Li, Qiwei Huang, Christopher Rensing, Waseem Raza, Qirong Shen (2016). Antibacterial Compounds-Macrolactin Alters the Soil Bacterial Community and Abundance of the Gene Encoding PKS. Frontiers in Microbiology.DOI
Wan‐Ying Xie, S. P. McGrath, Jian‐Qiang Su, P. R. Hirsch, Ian M. Clark, Qirong Shen, Yong‐Guan Zhu, Fangjie J. Zhao (2016). Long-Term Impact of Field Applications of Sewage Sludge on Soil Antibiotic Resistome. Environmental Science & Technology.DOI
Kai Wu, Zhiying Fang, Lili Wang, Saifei Yuan, Rong Hua Guo, Biao Shen, Qirong Shen (2016). Biological Potential of Bioorganic Fertilizer Fortified with Bacterial Antagonist for the Control of Tomato Bacterial Wilt and the Promotion of Crop Yields. Journal of Microbiology and Biotechnology.DOI
Wan‐Ying Xie, Xinping Yang, Qian Li, Longhua Wu, Qirong Shen, Fangjie J. Zhao (2016). Changes in antibiotic concentrations and antibiotic resistome during commercial composting of animal manures. Environmental Pollution.DOI
Min Wang, Yuming Sun, Zechen Gu, Ruirui Wang, Guomei Sun, Chen Xi Zhu, Shiwei Guo, Qirong Shen (2016). Nitrate Protects Cucumber Plants Against Fusarium oxysporum by Regulating Citrate Exudation. Plant and Cell Physiology.DOI
Waseem Raza, Ning Ling, Dongyang Liu, Zhong Wei, Qiwei Huang, Qirong Shen (2016). Volatile organic compounds produced by Pseudomonas fluorescens WR-1 restrict the growth and virulence traits of Ralstonia solanacearum. Microbiological Research.DOI
Ke Huang, Chuan Chen, Jun Zhang, Zhu Tang, Qirong Shen, Barry P. Rosen, Fangjie J. Zhao (2016). Efficient Arsenic Methylation and Volatilization Mediated by a Novel Bacterium from an Arsenic-Contaminated Paddy Soil. Environmental Science & Technology.DOI
Veronicah N Kimani, Lin Chen, Yunpeng Liu, Waseem Raza, Nan Zhang, Lewis Kamau Mungai, Qirong Shen, Ruifu Zhang (2016). Characterization of extracellular polymeric substances of Bacillus amyloliquefaciens SQR9 induced by root exudates of cucumber. Journal of Basic Microbiology.DOI
Waseem Raza, Ning Ling, Liudong Yang, Qiwei Huang, Qirong Shen (2016). Response of tomato wilt pathogen Ralstonia solanacearum to the volatile organic compounds produced by a biocontrol strain Bacillus amyloliquefaciens SQR-9. Scientific Reports.DOI
Waseem Raza, Zhong Wei, Ning Ling, Qiwei Huang, Qirong Shen (2016). Effect of organic fertilizers prepared from organic waste materials on the production of antibacterial volatile organic compounds by two biocontrol Bacillus amyloliquefaciens strains. Journal of Biotechnology.DOI
Waseem Raza, Ning Ling, Ruifu Zhang, Qiwei Huang, Yangchun Xu, Qirong Shen (2016). Success evaluation of the biological control of Fusarium wilts of cucumber, banana, and tomato since 2000 and future research strategies. Critical Reviews in Biotechnology.DOI
Xian Dong, Min Wang, Ning Ling, Qirong Shen, Shiwei Guo (2016). Potential role of photosynthesis-related factors in banana metabolism and defense against Fusarium oxysporum f. sp. cubense. Environmental and Experimental Botany.DOI
Ting Liu, Joann K. Whalen, Wei Ran, Qirong Shen, Huixin Li (2016). Bottom-up control of fertilization on soil nematode communities differs between crop management regimes. Soil Biology and Biochemistry.DOI
Ting Liu, Yong Li, Qirong Shen, Huixin Li, Joann K. Whalen (2016). Soil nematode community response to fertilisation in the root-associated and bulk soils of a rice-wheat agroecosystem. Nematology.DOI
David Chadwick, Jia Wei, Tong Yan'an, Yu Guanghui, Shen Qirong, Chen Qing (2015). Improving manure nutrient management towards sustainable agricultural intensification in China. Agriculture Ecosystems & Environment, Vol. 209.DOI
Bo Yang, Zhengqin Xiong, Jinyang Wang, Xin Xu, Qiwei Huang, Qirong Shen (2015). Mitigating net global warming potential and greenhouse gas intensities by substituting chemical nitrogen fertilizers with organic fertilization strategies in rice-wheat annual rotation systems in China: A 3-year field experiment. Ecological Engineering, Vol. 81.DOI
Wu Xiong, Qingyun Zhao, Jun Zhao, Weibing Xun, Rong Li, Ruifu Zhang, Huasong Wu, Qirong Shen (2015). Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing. Microbial Ecology, Vol. 700, No. 10.DOI
N. Ling, Yang Song, W. Raza, Qi-Wei Huang, Shi-Wei Guo, Qirong Shen (2015). The response of root-associated bacterial community to the grafting of watermelon. Plant and Soil.DOI
Binbin Ren, Min Wang, Yu-Pei Chen, Guomei Sun, Yong Li, Qirong Shen, Shi-Wei Guo (2015). Water absorption is affected by the nitrogen supply to rice plants. Plant and Soil.DOI
Weibing Xun, Zhao Jun, Chao Xue, Guishan Zhang, Wei Ran, Boren Wang, Qirong Shen, Ruifu Zhang (2015). Significant alteration of soil bacterial communities and organic carbon decomposition by different long‐term fertilization management conditions of extremely low‐productivity arable soil in S outh C hina. Environmental Microbiology.DOI
Kechang Niu, Ting Liu, Qirong Shen, Huixin Li (2015). Does body size–abundance allometry in soil fauna vary with environment? A field test for nematode communities in response to fertilization. Soil Biology and Biochemistry.DOI
Lei Ding, Limin Gao, Wei Liu, Min Wang, Mian Gu, Binbin Ren, Guohua Xu, Qirong Shen, Shiwei Guo (2015). Aquaporin plays an important role in mediating chloroplastic CO 2 concentration under high‐N supply in rice ( Oryza sativa ) plants. Physiologia Plantarum.DOI
Lifen Wang, Xiaoping Lü, Huiyan Yuan, Bo Wang, Qirong Shen (2015). Application of Bio-organic Fertilizer to Control Tomato Fusarium Wilting by Manipulating Soil Microbial Communities and Development. Communications in Soil Science and Plant Analysis.DOI
Nan Zhang, Dongqing Yang, Dandan Wang, Youzhi Miao, Jiahui Shao, Xuan Zhou, Zhihui Xu, Qing Li, Haichao Feng, Shuqing Li, Qirong Shen, Ruifu Zhang (2015). Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates. BMC Genomics.DOI
Chao Xue, C. Ryan Penton, Bangzhou Zhang, Mengxin Zhao, David E. Rothstein, David J. Mladenoff, Jodi A. Forrester, Qirong Shen, James M. Tiedje (2015). Soil fungal and bacterial responses to conversion of open land to short‐rotation woody biomass crops. GCB Bioenergy.DOI
Ke Huang, Chuan Chen, Qirong Shen, Barry P. Rosen, Fangjie J. Zhao (2015). Genetically Engineering Bacillus subtilis with a Heat-Resistant Arsenite Methyltransferase for Bioremediation of Arsenic-Contaminated Organic Waste. Applied and Environmental Microbiology.DOI
Jian Zhang, Günseli Bayram Akçapınar, Lea Atanasova, Mohammad Javad Rahimi, Agnieszka Przylucka, Dongqing Yang, Christian Peter Kubicek, Ruifu Zhang, Qirong Shen, Irina S. Druzhinina (2015). The neutral metallopeptidase NMP1 of Trichoderma guizhouense is required for mycotrophy and self‐defence. Environmental Microbiology.DOI
Ruixia Li, Feng M. Cai, Guan Pang, Qirong Shen, Rong Li, Wei Chen (2015). Solubilisation of Phosphate and Micronutrients by Trichoderma harzianum and Its Relationship with the Promotion of Tomato Plant Growth. PLoS ONE.DOI
Jian Xiao, Yongli Wen, Huan Li, Jialong Hao, Qirong Shen, Wei Ran, Xinlan Mei, Xinhua He, Guanghui Yu (2015). In situ visualisation and characterisation of the capacity of highly reactive minerals to preserve soil organic matter (SOM) in colloids at submicron scale. Chemosphere.DOI
Yuncheng Wu, Jun Jie Yuan, E Yaoyao, Waseem Raza, Qirong Shen, Qiwei Huang (2015). Effects of volatile organic compounds from Streptomyces albulus NJZJSA2 on growth of two fungal pathogens. Journal of Basic Microbiology.DOI
Kai Wu, Zhiying Fang, Rong Hua Guo, Bin Pan, Wen Shi, Saifei Yuan, Huilin Guan, Ming Gong, Biao Shen, Qirong Shen (2015). Pectin Enhances Bio-Control Efficacy by Inducing Colonization and Secretion of Secondary Metabolites by Bacillus amyloliquefaciens SQY 162 in the Rhizosphere of Tobacco. PLoS ONE.DOI
Jiuxin Guo, Xumeng Feng, Xiangyu Hu, Guangli Tian, Ning Ling, J. H. WANG, Qirong Shen, Shengxi Guo (2015). Effects of soil zinc availability, nitrogen fertilizer rate and zinc fertilizer application method on zinc biofortification of rice. The Journal of Agricultural Science.DOI
Zongzhuan Shen, Yunze Ruan, Beibei Wang, Shutang Zhong, Lanxi Su, Rong Li, Qirong Shen (2015). Effect of biofertilizer for suppressing Fusarium wilt disease of banana as well as enhancing microbial and chemical properties of soil under greenhouse trial. Applied Soil Ecology.DOI
Zongzhuan Shen, Yunze Ruan, Chao Xue, Shutang Zhong, Rong Li, Qirong Shen (2015). Soils naturally suppressive to banana Fusarium wilt disease harbor unique bacterial communities. Plant and Soil.DOI
Xiujuan Yang, Xuan Wang, Kang Wang, Lanxi Su, Hongmei Li, Rong Li, Qirong Shen (2015). The Nematicidal Effect of Camellia Seed Cake on Root-Knot Nematode Meloidogyne javanica of Banana. PLoS ONE.DOI
Beibei Wang, Rong Li, Yunze Ruan, Yannan Ou, Yan Zhao, Qirong Shen (2015). Pineapple–banana rotation reduced the amount of Fusarium oxysporum more than maize–banana rotation mainly through modulating fungal communities. Soil Biology and Biochemistry.DOI
Fang Zhang, Yafei Sun, Wenxia Pei, Ajay Jain, Rui Sun, Yue Cao, Xueneng Wu, Tingting Jiang, Liang Zhang, Xiaorong Fan, Aiqun Chen, Qirong Shen, Guohua Xu, Shubin Sun (2015). Involvement of O s P ht1;4in phosphate acquisition and mobilization facilitates embryo development in rice. The Plant Journal.DOI
Jun Zhang, Tingting Cao, Zhu Tang, Qirong Shen, Barry P. Rosen, Fangjie J. Zhao (2015). Arsenic Methylation and Volatilization by Arsenite S -Adenosylmethionine Methyltransferase in Pseudomonas alcaligenes NBRC14159. Applied and Environmental Microbiology.DOI
Zongzhuan Shen, Beibei Wang, Nana Lv, Yifei Sun, Xinyi Jiang, Rong Li, Yunze Ruan, Qirong Shen (2015). Effect of the combination of bio-organic fertiliser withBacillus amyloliquefaciensNJN-6 on the control of bananaFusariumwilt disease, crop production and banana rhizosphere culturable microflora. Biocontrol Science and Technology.DOI
Li Sun, Song Song, Lin Fu, Xuhui Deng, Dongshen Wang, Xiaolin Liang, Rong Li, Qirong Shen (2015). Exploring a soil fumigation strategy based on ammonium bicarbonate to control Fusarium wilts of cucurbits. Crop Protection.DOI
Min Wang, Yuming Sun, Guomei Sun, Xiaokang Liu, Luchong Zhai, Qirong Shen, Shiwei Guo (2015). Water balance altered in cucumber plants infected with Fusarium oxysporum f. sp. cucumerinum. Scientific Reports.DOI
Da Chen, Xin Liu, Chunyu Li, Wei Tian, Qirong Shen, Biao Shen (2014). Isolation of Bacillus amyloliquefaciens S20 and its application in control of eggplant bacterial wilt. Journal Of Environmental Management, Vol. 137.DOI
Lin Chen, Weibing Xun, Li Sun, Nan Zhang, Qirong Shen, Ruifu Zhang (2014). Effect of different long-term fertilization regimes on the viral community in an agricultural soil of Southern China. European Journal Of Soil Biology, Vol. 62.DOI
Jun Zhao, Ruifu Zhang, Chao Xue, Weibing Xun, Li Sun, Yangchun Xu, Qirong Shen (2014). Pyrosequencing Reveals Contrasting Soil Bacterial Diversity and Community Structure of Two Main Winter Wheat Cropping Systems in China. Microbial Ecology, Vol. 670, No. 20.DOI
Miao Zhang, Rong Li, Liangliang Cao, Juanjuan Shi, Hongjun Liu, Yan Huang, Qirong Shen (2014). Algal sludge from Taihu Lake can be utilized to create novel PGPR-containing bio-organic fertilizers. Journal Of Environmental Management, Vol. 132.DOI
Qing-Yin Shang, N. Ling, Xu-Meng Feng, Xiu-Xia Yang, Ping-Ping Wu, Jianwen Zou, Qirong Shen, Shi-Wei Guo (2014). Soil fertility and its significance to crop productivity and sustainability in typical agroecosystem: a summary of long-term fertilizer experiments in China. Plant and Soil.DOI
Kai Wu, Saifei Yuan, Guanhua Xun, Wen Shi, Bin Pan, Huilin Guan, Biao Shen, Qirong Shen (2014). Root exudates from two tobacco cultivars affect colonization of Ralstonia solanacearum and the disease index. European Journal of Plant Pathology.DOI
Li Sun, Jusheng Gao, Ting Huang, Joshua R. A. Kendall, Qirong Shen, Ruifu Zhang (2014). Parental material and cultivation determine soil bacterial community structure and fertility. FEMS Microbiology Ecology.DOI
Muhammad Faheem, Waseem Raza, Zhong Wei, Zhang Nan, Qirong Shen, Yangchun Xu (2014). Evaluation of the biocontrol potential of Streptomyces goshikiensis YCXU against Fusarium oxysporum f. sp. niveum. Biological Control.DOI
Hanpeng Liao, Shuixian Li, Zhong Wei, Qirong Shen, Yangchun Xu (2014). Insights into high-efficiency lignocellulolytic enzyme production by Penicillium oxalicum GZ-2 induced by a complex substrate. Biotechnology for Biofuels.DOI
Yuncheng Wu, Jun Jie Yuan, Waseem Raza, Qirong Shen, Qiwei Huang (2014). Biocontrol Traits and Antagonistic Potential of Bacillus amyloliquefaciens Strain NJZJSB3 Against Sclerotinia sclerotiorum, a Causal Agent of Canola Stem Rot. Journal of Microbiology and Biotechnology.DOI
Hanpeng Liao, Shuixian Li, Haiping Zheng, Zhong Wei, Dongyang Liu, Waseem Raza, Qirong Shen, Yangchun Xu (2014). A new acidophilic thermostable endo-1,4-β-mannanase from Penicillium oxalicum GZ-2: cloning, characterization and functional expression in Pichia pastoris. BMC Biotechnology.DOI
Yan Huang, Rong Li, Hongjun Liu, Beibei Wang, Chenmin Zhang, Qirong Shen (2014). Novel resource utilization of refloated algal sludge to improve the quality of organic fertilizer. Environmental Technology.DOI
Zhao Jun, Tian Ni, Yong Li, Wu Xiong, Wei Ran, Biao Shen, Qirong Shen, Ruifu Zhang (2014). Responses of Bacterial Communities in Arable Soils in a Rice-Wheat Cropping System to Different Fertilizer Regimes and Sampling Times. PLoS ONE.DOI
Shuang Zhao, Dongyang Liu, Ning Ling, Fadi Chen, Weimin Fang, Qirong Shen (2014). Bio-organic fertilizer application significantly reduces the Fusarium oxysporum population and alters the composition of fungi communities of watermelon Fusarium wilt rhizosphere soil. Biology and Fertility of Soils.DOI
Rong Li, Linzhi Li, Rong Huang, Yifei Sun, Xinlan Mei, Biao Shen, Qirong Shen (2014). Variations of culturable thermophilic microbe numbers and bacterial communities during the thermophilic phase of composting. World Journal of Microbiology and Biotechnology.DOI
Zhen Zhu, Fengge Zhang, Zhong Wei, Wei Ran, Qirong Shen (2013). The usage of rice straw as a major substrate for the production of surfactin by Bacillus amyloliquefaciens XZ-173 in solid-state fermentation. Journal Of Environmental Management, Vol. 127.DOI
Zongzhuan Shen, Shutang Zhong, Yangong Wang, Beibei Wang, Xinlan Mei, Rong Li, Yunze Ruan, Qirong Shen (2013). Induced soil microbial suppression of banana fusarium wilt disease using compost and biofertilizers to improve yield and quality. European Journal Of Soil Biology, Vol. 57.DOI
Xian Dong, Yinfeng Xiong, N. Ling, Qirong Shen, Shi-Wei Guo (2013). Fusaric acid accelerates the senescence of leaf in banana when infected by Fusarium. World Journal of Microbiology & Biotechnology.DOI
Min Wang, N. Ling, Xian Dong, Xiaokang Liu, Qirong Shen, Shi-Wei Guo (2013). Effect of fusaric acid on the leaf physiology of cucumber seedlings. European journal of plant pathology.DOI
Qing-Yin Shang, Cui-Min Gao, Xiu-Xia Yang, Ping-Ping Wu, N. Ling, Qirong Shen, Shi-Wei Guo (2013). Ammonia volatilization in Chinese double rice-cropping systems: a 3-year field measurement in long-term fertilizer experiments. Biology and Fertility of Soils.DOI
Jianchao Zhang, Weibing Xun, Zhen Zhu, Dongchu Li, Qirong Shen, Wei Ran (2013). Influence of Long-Term Fertilizer Treatments on the Fluorescence Spectroscopic Characterization of DOM Leached by Acid Rain From Red Soil. Soil Science.DOI
JIN-GUO ZHANG, Lin Zhang, Ping Wang, Qiwei Huang, Guanghui Yu, Dishen Li, Qirong Shen, Wei Ran (2013). The role of non‐crystalline Fe in the increase of SOC after long‐term organic manure application to the red soil of s outhern C hina. European Journal of Soil Science.DOI
Yi-Hong Luo, Dongqing Zhang, Guanghui Yu, Qirong Shen (2013). Aromatic Moieties from Matured Chicken Manure and Agriculture Residues Compost Suppress Growth of Lepidium sativum L. and Trichoderma harzianum. Pedosphere.DOI
Nan Zhang, Dandan Wang, Yunpeng Liu, Shuqing Li, Qirong Shen, Ruifu Zhang (2013). Effects of different plant root exudates and their organic acid components on chemotaxis, biofilm formation and colonization by beneficial rhizosphere-associated bacterial strains. Plant and Soil.DOI
Shuqing Li, Ruifu Zhang, Yang Wang, Nan Zhang, Jiahui Shao, Meihua Qiu, Biao Shen, Xihou Yin, Qirong Shen (2013). Promoter analysis and transcription regulation of fus gene cluster responsible for fusaricidin synthesis of Paenibacillus polymyxa SQR-21. Applied Microbiology and Biotechnology.DOI
Meihua Qiu, Shuqing Li, Xuan Zhou, Xiaoshuang Cui, Jorge M. Vivanco, Nan Zhang, Qirong Shen, Ruifu Zhang (2013). De-coupling of root–microbiome associations followed by antagonist inoculation improves rhizosphere soil suppressiveness. Biology and Fertility of Soils.DOI
Biao Sui, Xumeng Feng, Guangli Tian, Xiangyu Hu, Qirong Shen, Shiwei Guo (2013). Optimizing nitrogen supply increases rice yield and nitrogen use efficiency by regulating yield formation factors. Field Crops Research.DOI
Hongying Huang, Jin‐Liu Cao, Hongsheng Wu, Xiaomei Ye, Yan Ma, Jian‐Guang Yu, Qirong Shen, Zhizhou Chang (2013). Elevated methane emissions from a paddy field in southeast China occur after applying anaerobic digestion slurry. GCB Bioenergy.DOI
Xiaoming Li, Qirong Shen, Dongqing Zhang, Xinlan Mei, Ran Wei, Yangchun Xu, Guanghui Yu (2013). Functional Groups Determine Biochar Properties (pH and EC) as Studied by Two-Dimensional 13C NMR Correlation Spectroscopy. PLoS ONE.DOI
Yi Luo, Lifei Sun, Zhen Zhu, Wei Ran, Qirong Shen (2013). Identification and characterization of an anti-fungi Fusarium oxysporum f. sp. cucumerium protease from the Bacillus subtilis strain N7. The Journal of Microbiology.DOI
Yong Li, Binbin Ren, Lei Ding, Qirong Shen, Shaobing Peng, Shiwei Guo (2013). Does Chloroplast Size Influence Photosynthetic Nitrogen Use Efficiency? PLoS ONE.DOI
Min Wang, Qingsong Zheng, Qirong Shen, Shiwei Guo (2013). The Critical Role of Potassium in Plant Stress Response. International Journal of Molecular Sciences.DOI
Shiyong Tan, Yue Dong, Hanpeng Liao, Jianfeng Huang, Song Song, Yangchun Xu, Qirong Shen (2013). Antagonistic bacterium Bacillus amyloliquefaciens induces resistance and controls the bacterial wilt of tomato. Pest Management Science.DOI
Dayakar V. Badri, Jacqueline M. Chaparro, Ruifu Zhang, Qirong Shen, Jorge M. Vivanco (2013). Application of Natural Blends of Phytochemicals Derived from the Root Exudates of Arabidopsis to the Soil Reveal That Phenolic-related Compounds Predominantly Modulate the Soil Microbiome. Journal of Biological Chemistry.DOI
Qirong Shen (2013). Effects of ammonium bicarbonate with calcium and magnesium in granulation applied to soils on the grain yields and the photosynthesis of flag leaves of winter wheat. Nanjing Nongye Daxue xuebao.
Yiren Liu, Xiang Li, Qirong Shen, Yangchun Xu (2012). Enzyme Activity in Water-Stable Soil Aggregates as Affected by Long-Term Application of Organic Manure and Chemical Fertiliser. Pedosphere.DOI
Shiyong Tan, Chunlan Yang, Xinlan Mei, Shengyuan Shen, Waseem Raza, Qirong Shen, Yangchun Xu (2012). The effect of organic acids from tomato root exudates on rhizosphere colonization of Bacillus amyloliquefaciens T-5. Applied Soil Ecology.DOI
Jun Weng, Yang Wang, Juan Li, Qirong Shen, Ruifu Zhang (2012). Enhanced root colonization and biocontrol activity of Bacillus amyloliquefaciens SQR9 by abrB gene disruption. Applied Microbiology and Biotechnology.DOI
Zhihui Xu, Jiahui Shao, Bing Li, Xin Yan, Qirong Shen, Ruifu Zhang (2012). Contribution of Bacillomycin D in Bacillus amyloliquefaciens SQR9 to Antifungal Activity and Biofilm Formation. Applied and Environmental Microbiology.DOI
Fengge Zhang, Jun Jie Yuan, Xingming Yang, Yaqing Cui, Lihua Chen, Wei Ran, Qirong Shen (2012). Putative Trichoderma harzianum mutant promotes cucumber growth by enhanced production of indole acetic acid and plant colonization. Plant and Soil.DOI
Min Wang, Ning Ling, Xian Dong, Yiyong Zhu, Qirong Shen, Shiwei Guo (2012). Thermographic visualization of leaf response in cucumber plants infected with the soil-borne pathogen Fusarium oxysporum f. sp. cucumerinum. Plant Physiology and Biochemistry.DOI
Beibei Wang, Jun Jie Yuan, Jian Zhang, Zongzhuan Shen, Maoxing Zhang, Rong Li, Yunze Ruan, Qirong Shen (2012). Effects of novel bioorganic fertilizer produced by Bacillus amyloliquefaciens W19 on antagonism of Fusarium wilt of banana. Biology and Fertility of Soils.DOI
Chuanyu Ding, Qirong Shen, Ruifu Zhang, Wei Chen (2012). Evaluation of rhizosphere bacteria and derived bio-organic fertilizers as potential biocontrol agents against bacterial wilt (Ralstonia solanacearum) of potato. Plant and Soil.DOI
Shuang Zhao, Bruce B. Clarke, Qirong Shen, Lisa Zhang, Ning Zhang (2012). Development and application of a TaqMan real-time PCR assay for rapid detection of Magnaporthe poae. Mycologia.DOI
Xian Dong, Ning Ling, Min Wang, Qirong Shen, Shiwei Guo (2012). Fusaric acid is a crucial factor in the disturbance of leaf water imbalance in Fusarium-infected banana plants. Plant Physiology and Biochemistry.DOI
Dabing Xu, Dongyang Liu, Zhu Tang, Guanghui Yu, Jiafu Yuan, Qirong Shen, Qiwei Huang (2012). Structure of chemical components in different compost extracts characterized by chromatogram and spectroscopy analysis and its influence on plant growth promotion. Journal of Material Cycles and Waste Management.DOI
Guoyi Zhang, Wasim Raza, Xiaohui Wang, Wei Ran, Qirong Shen (2012). Systemic modification of cotton root exudates induced by arbuscular mycorrhizal fungi and Bacillus vallismortis HJ-5 and their effects on Verticillium wilt disease. Applied Soil Ecology.DOI
Qiu-Jun Wang, Li Zhang, Jianchao Zhang, Qirong Shen, Wei Ran, Qiwei Huang (2012). Effects of compost on the chemical composition of SOM in density and aggregate fractions from rice–wheat cropping systems as shown by solid‐state 13C‐NMR spectroscopy. Journal of Plant Nutrition and Soil Science.DOI
Bo Wang, Qirong Shen (2012). EFFECTS OF AMMONIUM ON THE ROOT ARCHITECTURE AND NITRATE UPTAKE KINETICS OF TWO TYPICAL LETTUCE GENOTYPES GROWN IN HYDROPONIC SYSTEMS. Journal of Plant Nutrition.DOI
Qiu-Jun Wang, Qiwei Huang, Li Zhang, Jianchao Zhang, Qirong Shen, Wei Ran (2012). The effects of compost in a rice–wheat cropping system on aggregate size, carbon and nitrogen content of the size–density fraction and chemical composition of soil organic matter, as shown by 13 C CP NMR spectroscopy. Soil Use and Management.DOI
Caixia Dong, Yinglin Lu, Yiyong Zhu, Yi Zhou, Yangchun Xu, Qirong Shen (2012). Effect of homogeneous and heterogeneous supply of nitrate and ammonium on nitrogen uptake and distribution in tomato seedlings. Plant Growth Regulation.DOI
Guanghui Yu, Min-Jie Wu, Guanran Wei, Yi-Hong Luo, Wei Ran, Boren Wang, Jian−chao Zhang, Qirong Shen (2012). Binding of Organic Ligands with Al(III) in Dissolved Organic Matter from Soil: Implications for Soil Organic Carbon Storage. Environmental Science & Technology.DOI
Lixuan Ren, Yunsheng Lou, Ning Zhang, Xudong Zhu, Wenya Hao, Shubin Sun, Qirong Shen, Guohua Xu (2012). Role of arbuscular mycorrhizal network in carbon and phosphorus transfer between plants. Biology and Fertility of Soils.DOI
Ying Yang, Qingsong Zheng, Mei Liu, Xiaohua Long, Zhaopu Liu, Qirong Shen, Shiwei Guo (2012). Difference in Sodium Spatial Distribution in the Shoot of Two Canola Cultivars Under Saline Stress. Plant and Cell Physiology.DOI
Yong Li, Binbin Ren, Xiuxia Yang, Guohua Xu, Qirong Shen, Shiwei Guo (2012). Chloroplast Downsizing Under Nitrate Nutrition Restrained Mesophyll Conductance and Photosynthesis in Rice (Oryza sativa L.) Under Drought Conditions. Plant and Cell Physiology.DOI
Yiyong Zhu, Houqing Zeng, Qirong Shen, Takayuki Ishikawa, Guntur Venkata Subbarao (2012). Interplay among NH 4 + uptake, rhizosphere pH and plasma membrane H+-ATPase determine the release of BNIs in sorghum roots – possible mechanisms and underlying hypothesis. Plant and Soil.DOI
Houqing Zeng, Liu Gan, Toshinori Kinoshita, Ruiping Zhang, Yiyong Zhu, Qirong Shen, Guohua Xu (2012). Stimulation of phosphorus uptake by ammonium nutrition involves plasma membrane H+ ATPase in rice roots. Plant and Soil.DOI
Dongyang Liu, Ruifu Zhang, Xingming Yang, Zhenhua Zhang, Song Song, Youzhi Miao, Qirong Shen (2012). Characterization of a thermostable β-glucosidase from Aspergillus fumigatus Z5, and its functional expression in Pichia pastoris X33. Microbial Cell Factories.DOI
Lihua Chen, Yaqing Cui, Xingming Yang, Zhao Di-kun, Qirong Shen (2012). An antifungal compound from Trichoderma harzianum SQR-T037 effectively controls Fusarium wilt of cucumber in continuously cropped soil. Australasian Plant Pathology.DOI
Zhenhua Huo, Nan Zhang, Waseem Raza, Xinqi Huang, Xiaoyu Yong, Yunpeng Liu, Dandan Wang, Shuqing Li, Qirong Shen, Ruifu Zhang (2012). Comparison of the spores of Paenibacillus polymyxa prepared at different temperatures. Biotechnology Letters.DOI
Xiuxia Yang, Yong Li, Binbin Ren, Lei Ding, Cuimin Gao, Qirong Shen, Shiwei Guo (2012). Drought-Induced Root Aerenchyma Formation Restricts Water Uptake in Rice Seedlings Supplied with Nitrate. Plant and Cell Physiology.DOI
Xueyong Song, K. Xie, Hongxia Zhao, Y. L. Li, Chao Dong, Yingchun Xu, Qirong Shen (2012). Effects of different organic fertilizers on tree growth, yield, fruit quality, and soil microorganisms in a pear orchard. European Journal of Horticultural Science.DOI
Qirong Shen (2012). Effect of specific microbial fertilizer on the rhizosphere microbial flora of different continuous cropping obstacles soil. Jiangsu nongye xuebao.
Ning Ling, Waseem Raza, Jinghua Ma, Qiwei Huang, Qirong Shen (2011). Identification and role of organic acids in watermelon root exudates for recruiting Paenibacillus polymyxa SQR-21 in the rhizosphere. European Journal Of Soil Biology, Vol. 47, No. 6.DOI
Yong Li, Xiu-Xia Yang, Binbin Ren, Qirong Shen, Shi-Wei Guo (2011). Why Nitrogen Use Efficiency Decreases Under High Nitrogen Supply in Rice (Oryza sativa L.) Seedlings. Journal of Plant Growth Regulation.DOI
Guanghui Yu, Minjie Wu, Yi-Hong Luo, Xingming Yang, Wei Ran, Qirong Shen (2011). Fluorescence excitation–emission spectroscopy with regional integration analysis for assessment of compost maturity. Waste Management.DOI
Ming Yan, Xiaorong Fan, HUIMING FENG, Tony Miller, Qirong Shen, Guohua Xu (2011). Rice OsNAR2.1 interacts with OsNRT2.1, OsNRT2.2 and OsNRT2.3a nitrate transporters to provide uptake over high and low concentration ranges. Plant Cell & Environment.DOI
Bo Wang, Qirong Shen (2011). NH4+ -N/NO3− -N ratios on growth and NO3− -N remobilization in root vacuoles and cytoplasm of lettuce genotypes. Canadian Journal of Plant Science.DOI
Bo Wang, Qirong Shen (2011). NH4 -N/NO3- -N ratios on growth and NO3- -N remobilization in root vacuoles and cytoplasm of lettuce genotypes. BioOne Complete (BioOne).DOI
Yun Cao, Zhenhua Zhang, Ning Ling, Yujuan Yuan, Xinyan Zheng, Biao Shen, Qirong Shen (2011). Bacillus subtilis SQR 9 can control Fusarium wilt in cucumber by colonizing plant roots. Biology and Fertility of Soils.DOI
Nan Zhang, Kai Wu, Xin He, Shuqing Li, Zhenhua Zhang, Biao Shen, Xingming Yang, Ruifu Zhang, Qiwei Huang, Qirong Shen (2011). A new bioorganic fertilizer can effectively control banana wilt by strong colonization with Bacillus subtilis N11. Plant and Soil.DOI
Wenjing Song, Kousar Makeen, Dongsheng Wang, Chenming Zhang, Yehong Xu, Haijuan Zhao, Tu Erdi, Yali Zhang, Qirong Shen, Guohua Xu (2011). Nitrate supply affects root growth differentially in two rice cultivars differing in nitrogen use efficiency. Plant and Soil.DOI
Shixue Yin, Yuanhua Dong, Yangchun Xu, Qiwei Huang, Qirong Shen (2011). Upland rice seedling wilt and microbial biomass and enzyme activities of compost-treated soils. Biology and Fertility of Soils.DOI
Huimin Feng, Ming Yan, Xiaorong Fan, Baozhen Li, Qirong Shen, Tony Miller, Guohua Xu (2011). Spatial expression and regulation of rice high-affinity nitrate transporters by nitrogen and carbon status. Journal of Experimental Botany.DOI
Qirong Shen (2011). Relationship between membrane potential,plasma membrane H~+-Pump and H~+release by rice root under ammonium nutrition. Plant Nutrition and Fertilizing Science.
Qirong Shen (2011). The relationship between the accumulation of nitrate and plasma membrane H~+-ATPase in Arabidopsis. Nanjing Nongye Daxue xuebao.
Xin-Juan XU, Qing-Yu LI, Xiaohui Song, Qirong Shen, Dong Cai-Xia (2011). Dynamic Regulation of Nitrogen and Organic Acid Metabolism of Cherry Tomato Fruit as Affected by Different Nitrogen Forms. Pedosphere.DOI
Liping Wang, Qirong Shen, Guanghui Yu, Wei Ran, Yangchun Xu (2011). Fate of biopolymers during rapeseed meal and wheat bran composting as studied by two-dimensional correlation spectroscopy in combination with multiple fluorescence labeling techniques. Bioresource Technology.DOI
Guanghui Yu, Zhu Tang, Yangchun Xu, Qirong Shen (2011). Multiple Fluorescence Labeling and Two Dimensional FTIR–13C NMR Heterospectral Correlation Spectroscopy to Characterize Extracellular Polymeric Substances in Biofilms Produced during Composting. Environmental Science & Technology.DOI
Zhu Tang, Guanghui Yu, Dongyang Liu, Dabing Xu, Qirong Shen (2010). Different analysis techniques for fluorescence excitation–emission matrix spectroscopy to assess compost maturity. Chemosphere.DOI
Ning Ling, Qiwei Huang, Shiwei Guo, Qirong Shen (2010). Paenibacillus polymyxa SQR-21 systemically affects root exudates of watermelon to decrease the conidial germination of Fusarium oxysporum f.sp. niveum. Plant and Soil.DOI
Jia Luo, Wei Ran, Jiang Hu, Xingming Yang, Yangchun Xu, Qirong Shen (2010). Application of Bio‐Organic Fertilizer Significantly Affected Fungal Diversity of Soils. Soil Science Society of America Journal.DOI
Ying Wu, Fang Liu, Yichen Liu, Zhenhua Zhang, Tiantian Zhou, Xin Liu, Qirong Shen, Biao Shen (2010). Identification of chitinases Is-chiA and Is-chiB from Isoptericola jiangsuensis CLG and their characterization. Applied Microbiology and Biotechnology.DOI
Yali Zhang, Huajun Lv, Dongsheng Wang, Jingchao Deng, Wenjing Song, Kousar Makeen, Qirong Shen, Guohua Xu (2010). Partial nitrate nutrition amends photosynthetic characteristics in rice (Oryza sativa L. var. japonica) differing in nitrogen use efficiency. Plant Growth Regulation.DOI
Guanghui Yu, Yi-Hong Luo, Min-Jie Wu, Zhu Tang, Dongyang Liu, Xingming Yang, Qirong Shen (2010). PARAFAC modeling of fluorescence excitation−emission spectra for rapid assessment of compost maturity. Bioresource Technology.DOI
Jianbo Fan, Yali Zhang, Debra Turner, Yin-Hua DUAN, Dongsheng Wang, Qirong Shen (2010). Root Physiological and Morphological Characteristics of Two Rice Cultivars with Different Nitrogen-Use Efficiency. Pedosphere.DOI
Lixuan Ren, Yunsheng Lou, Kazunori Sakamoto, Kazuyuki Inubushi, Yoshimiki Amemiya, Qirong Shen, Guohua Xu (2010). Effects of Arbuscular Mycorrhizal Colonization on Microbial Community in Rhizosphere Soil andFusariumWilt Disease in Tomato. Communications in Soil Science and Plant Analysis.DOI
X. B. Yang, Q. Shang, Pingping Wu, J. Liu, Qirong Shen, Shiwei Guo, Zhengqin Xiong (2010). Methane emissions from double rice agriculture under long-term fertilizing systems in Hunan, China. Agriculture Ecosystems & Environment.DOI
Hongsheng Wu, Jia Luo, Waseem Raza, Yanxia Liu, Mian Gu, Gao Chen, Xiao-feng Hu, Jing-heng Wang, Ze-sheng Mao, Qirong Shen (2010). Effect of exogenously added ferulic acid on in vitro Fusarium oxysporum f. sp. niveum. Scientia Horticulturae.DOI
He Xin, Qiwei Huang, Yang XingMing, Wei Ran, Xu YangChun, Biao Shen, Qirong Shen (2010). Screening and identification of pathogen causing banana Fusarium wilt and the relationship between spore suspension concentration and the incidence rate. Zhongguo nongye Kexue.
Xiao Hu, Jinyun Guo, Nan Zhang, Biao Shen, Yangchun Xu, Qirong Shen (2010). Screening of a Phosphate Solubilizing and Disease Inhibiting Bacteria Strain and Studies on Its P-Solubilizing Characteristics. Zhongguo nongye Kexue.
Qirong Shen (2010). Characteristics of flag leaf senescence among three rice cultivars with different nitrogen use efficiency. Nanjing Nongye Daxue xuebao.
Zhu YiYong, Houqing Zeng, Dong CaiXia, Yin Xiaoming, Qirong Shen (2010). Relationships between Auxin,miR164 and Development of Proteoid Roots of White Lupin under P Deficiency. Xibei zhiwu xuebao.
Jianwen Zou, Yao Huang, Yanmei Qin, Shuwei Liu, Qirong Shen, Genxing Pan, Yanyu Lu, Qiaohui Liu (2009). Changes in fertilizer-induced direct N2O emissions from paddy fields during rice-growing season in China between 1950s and 1990s. Global Change Biology, Vol. 150, No. 10.DOI
Ping-Ping Wu, Jin-Jian Liu, Xiu-Xia Yang, Qing-Yin Shang, Yi Zhou, Xiao-Li Xie, Qirong Shen, Shi-Wei Guo (2009). Effects of Different Fertilization Systems on Ammonia Volatilization from Double-Rice Cropping Field in Red Soil Region.
Yingxu Gao, Yong Li, Xiuxia Yang, Haijun Li, Qirong Shen, Shiwei Guo (2009). Ammonium nutrition increases water absorption in rice seedlings (Oryza sativa L.) under water stress. Plant and Soil.DOI
Wu ChengLong, Qirong Shen, Jingdong Mao, Yangchun Xu (2009). Fate of 15N after combined application of rabbit manure and inorganic N fertilizers in a rice–wheat rotation system. Biology and Fertility of Soils.DOI
Yali Zhang, Jianbo Fan, Dongsheng Wang, Qirong Shen (2009). Genotypic Differences in Grain Yield and Physiological Nitrogen Use Efficiency Among Rice Cultivars. Pedosphere.DOI
Yong Li, Yingxu Gao, Lei Ding, Qirong Shen, Shiwei Guo (2009). Ammonium enhances the tolerance of rice seedlings (Oryza sativa L.) to drought condition. Agricultural Water Management.DOI
Yiyong Zhu, Tingjun Di, Guohua Xu, Xi Chen, Houqing Zeng, Feng Yan, Qirong Shen (2009). Adaptation of plasma membrane H + ‐ATPase of rice roots to low pH as related to ammonium nutrition. Plant Cell & Environment.DOI
Tony Miller, Qirong Shen, Guohua Xu (2009). Freeways in the plant: transporters for N, P and S and their regulation. Current Opinion in Plant Biology.DOI
Hongsheng Wu, Dongyang Liu, Ning Ling, Wei Bao, Rongrong Ying, Qirong Shen (2009). Influence of Root Exudates of Watermelon on Fusarium oxysporum f. sp. niveum. Soil Science Society of America Journal.DOI
Yong Li, Yingxu Gao, Xiaoming Xu, Qirong Shen, Shiwei Guo (2009). Light-saturated photosynthetic rate in high-nitrogen rice (Oryza sativa L.) leaves is related to chloroplastic CO2 concentration. Journal of Experimental Botany.DOI
Hongsheng Wu, Jia Luo, YAN‐XIA LIU, Aiqun Chen, Zhu Tang, Yun Cao, Gao Chen, Ze-sheng Mao, Qiwei Huang, Qirong Shen (2009). In Vitro Physiological Responses of Fusarium oxysporum f. sp. niveum to Exogenously Applied Syringic Acid. Journal of Eukaryotic Microbiology.DOI
Hao Wu, Yuwei Wang, C. -Y. Zhang, Mian Gu, YAN‐XIA LIU, Gao Chen, J. -H. Wang, Zhihui Tang, Ze-sheng Mao, Qirong Shen (2009). Physiological and biochemical responses of in vitro Fusarium oxysporum f.sp. niveum to benzoic acid. Folia Microbiologica.DOI
Hongsheng Wu, Yang Wang, Wei Bao, Dongyang Liu, Waseem Raza, Qiwei Huang, Ze-sheng Mao, Qirong Shen (2009). Responses of Fusarium oxysporum f. sp. niveum to exogenously added sinapic acid in vitro. Biology and Fertility of Soils.DOI
Bo Wang, Lai Tao, Qiwei Huang, Xingming Yang, Qirong Shen (2009). Effect of N Fertilizers on Root Growth and Endogenous Hormones in Strawberry. Pedosphere.DOI
Yonghong Wang, Wei Ran, Zhang FuGuo, Yang XingMing, Xu YangChun, Qirong Shen (2009). Study on conditions in solid-state fermentation of rapeseed meal by mixed strains for amino acid fertilizer. Zhongguo nongye Kexue.
Qirong Shen (2009). Effect of different foliar fertilizers on growth of Capsicum annuum L. Nanjing Nongye Daxue xuebao.
Qirong Shen (2009). Isolation of a chitinase producing bacterium from mycorrhizospheric soil of tomato and its chitinase activity. Nanjing Nongye Daxue xuebao.
Penghui Ai, Shubin Sun, Jianning Zhao, Xiaorong Fan, Weijie Xin, Qiang Guo, Ling Yu, Qirong Shen, Ping Wu, Tony Miller, Guohua Xu (2008). Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation. The Plant Journal.DOI
Yun Cao, Xiaorong Fan, Shubin Sun, Guohua Xu, Jiang Hu, Qirong Shen (2008). Effect of Nitrate on Activities and Transcript Levels of Nitrate Reductase and Glutamine Synthetase in Rice. Pedosphere.DOI
Hongsheng Wu, Xin-ning Yang, Jiaqin Fan, Weiguo Miao, Ning Ling, Yangchun Xu, Qiwei Huang, Qirong Shen (2008). Suppression of Fusarium wilt of watermelon by a bio-organic fertilizer containing combinations of antagonistic microorganisms. BioControl.DOI
Shusheng Zhang, Waseem Raza, Xingming Yang, Jiang Hu, Qiwei Huang, Yangchun Xu, Xing‐Hai Liu, Wei Ran, Qirong Shen (2008). Control of Fusarium wilt disease of cucumber plants with the application of a bioorganic fertilizer. Biology and Fertility of Soils.DOI
Shiwei Guo, Yuhan Zhou, Yongchun Li, Yonggang Gao, Qirong Shen (2008). Effects of different Nitrogen forms and osmotic stress on water use efficiency of rice (Oryza sativa). Annals of Applied Biology.DOI
Hongsheng Wu, Xiaoming Yin, Dongyang Liu, Ning Ling, Wei Bao, Rongrong Ying, Yiyong Zhu, Shiwei Guo, Qirong Shen (2008). Effect of fungal fusaric acid on the root and leaf physiology of watermelon (Citrullus lanatus) seedlings. Plant and Soil.DOI
Chao Cai, Junyi Wang, Yong‐Guan Zhu, Qirong Shen, Bin Li, Yi‐Ping Tong, Zhensheng Li (2008). Gene Structure and Expression of the High‐affinity Nitrate Transport System in Rice Roots. Journal of Integrative Plant Biology.DOI
Hongsheng Wu, Waseem Raza, Jiaqin Fan, Yong-Gang Sun, Wei Bao, Qirong Shen (2008). Cinnamic Acid Inhibits Growth but Stimulates Production of Pathogenesis Factors by in Vitro Cultures of Fusarium oxysporum f.sp. niveum. Journal of Agricultural and Food Chemistry.DOI
Hongsheng Wu, Wei Bao, Dongyang Liu, Ning Ling, Rongrong Ying, Waseem Raza, Qirong Shen (2008). Effect of fusaric acid on biomass and photosynthesis of watermelon seedlings leaves. Caryologia.DOI
Qirong Shen (2008). Research progress on high nitrogen uptake and utilization by rice plants. Nanjing Nongye Daxue xuebao.
Qirong Shen (2008). Effects of Intercropping Watermelon with Rain Fed Rice on Fusarium Wilt and the Microflora in the Rhizosphere Soil. Zhongguo nongye Kexue.
Qirong Shen (2008). The Relationship Between Plasma Membrane H~+-ATPase and Accumulation of Nitrate in Pakchoi. Zhongguo nongye Kexue.
Qirong Shen (2008). Effect of foliar fertilizer on growth of rapeseed seedlings. Nanjing Nongye Daxue xuebao.
Qirong Shen (2008). Inhibition of Root Cell Transmembrane Potential and Leaf Anti-Stress Enzymes of Watermelon Seedlings by Fusaric Acid. Zhongguo nongye Kexue.
Qirong Shen (2008). Nitrogen use efficiency and ammonia volatilization from rice shoot in late growth stages. Plant Nutrition and Fertilizing Science.
Qirong Shen (2008). Effect of different organic-inorganic mixed fertilizer application on pepper yield and soil microbial properties. Plant Nutrition and Fertilizing Science.
Qirong Shen (2008). Effect of Formation of Organic-Inorganic Mixed Fertilizers on Soil N Supply and Growth of Maize. Shengtai yu nongcun huanjing xuebao.
Qirong Shen (2008). Effects of different formula foliar fertilizers on yield and qualities of Ipomoea aquatica. Nanjing Nongye Daxue xuebao.
Qirong Shen (2008). Identification of the Fusarium oxysporum f.sp. niveum and the effects of rice root exudates on its growth. Nanjing Nongye Daxue xuebao.
Qirong Shen (2008). Effects of nitrogen form and water stress on root physiological characteristics of rice plants. Nanjing Nongye Daxue xuebao.
Lixuan Ren, Shiming Su, Xingming Yang, Yangchun Xu, Qiwei Huang, Qirong Shen (2007). Intercropping with aerobic rice suppressed Fusarium wilt in watermelon. Soil Biology and Biochemistry.DOI
Yaohong Zhang, Jianbo Fan, Yali Zhang, Dongsheng Wang, Qiwei Huang, Qirong Shen (2007). N Accumulation and Translocation in Four Japonica Rice Cultivars at Different N Rates. Pedosphere.DOI
Yinghua Duan, Xiaoming Yin, Yali Zhang, Qirong Shen (2007). Mechanisms of Enhanced Rice Growth and Nitrogen Uptake by Nitrate. Pedosphere.DOI
Shiwei Guo, Yi Zhou, Ying-Xu GAO, Yong LI, Qirong Shen (2007). New Insights into the Nitrogen Form Effect on Photosynthesis and Photorespiration. Pedosphere.DOI
Hongsheng Wu, Xiaoming Yin, Yiyong Zhu, Shiwei Guo, Chenglong Wu, Yinglin Lu, Qirong Shen (2007). Nitrogen metabolism disorder in watermelon leaf caused by fusaric acid. Physiological and Molecular Plant Pathology.DOI
Shiwei Guo, Gui Chen, Yi Zhou, Qirong Shen (2007). Ammonium nutrition increases photosynthesis rate under water stress at early development stage of rice (Oryza sativa L.). Plant and Soil.DOI
Yangchun Xu, Wei Chen, Qirong Shen (2007). Soil Organic Carbon and Nitrogen Pools Impacted by Long‐Term Tillage and Fertilization Practices. Communications in Soil Science and Plant Analysis.DOI
Yan Duan, Yinglao Zhang, Liuxin Ye, Xiaoru Fan, Guohua Xu, Qirong Shen (2007). Responses of Rice Cultivars with Different Nitrogen Use Efficiency to Partial Nitrate Nutrition. Annals of Botany.DOI
Shiwei Guo, Yi Zhou, Qirong Shen, Fan Zhang (2007). Effect of Ammonium and Nitrate Nutrition On Some Physiological Processes in Higher Plants ‐ Growth, Photosynthesis, Photorespiration, and Water Relations. Plant Biology.DOI
Qirong Shen (2007). Effects of Different N Forms on Root Morphology and Water Absorption of Lowland and Upland Rice Plants. Zhongguo shuidao kexue.
Qirong Shen (2007). Effect of NH~4~+ to NO_3~- ratio(NH_4~+/NO~3~-)on biological characteristics of rice with different nitrogen use efficiency. Nanjing Nongye Daxue xuebao.
Qirong Shen (2007). Comparison of growth and nitrogen uptake and assimilation by indica and japonica rice at the seedling stage under waterlogged conditions. Nanjing Nongye Daxue xuebao.
Qirong Shen (2007). Response of root growth of rice genotypes with different N use efficiency to enhanced nitrate nutrition. Plant Nutrition and Fertilizing Science.
Tingjun Di, Zhu YiYong, Meihua Qiu, Kan Jianluan, Xiaoman Zhang, Guohua Xu, Qirong Shen (2007). Response of Plasma Membrane H~+-ATPase of Rice Root to Ammonium and Nitrate Nutrition. Zhongguo shuidao kexue.
Qirong Shen (2007). Effect of nitrogen form and water stress on basic photosynthetic characteristics of rice at seedling stage. Nanjing Nongye Daxue xuebao.
Qirong Shen (2007). Effect of NH_4~+-N/NO_3~--N ratios on the free amino acids and three kinds of enzymes of nitrogen metabolism in spinach(Spinacia Oleracea L.) shoot. Plant Nutrition and Fertilizing Science.
Xiaomin Chen, Qirong Shen, Yangchun Xu (2007). Hydraulic properties of typical salt-affected soils in Jiangsu Province, China. 《中国环境科学与工程前沿：英文版》.DOI
Shi-Wei Guo, Qirong Shen (2006). Effects of Different Nitrogen Forms on Rice Seedlings Growth with Partial Roots Exposed to Water Stress.
DUAN Ying-Hua, Yali Zhang, Qirong Shen, Wang Song-Wei (2006). Nitrate Effect on Rice Growth and Nitrogen Absorption and Assimilation at Different Growth Stages. Pedosphere.DOI
Baozhen Li, Weijie Xin, Shubin Sun, Qirong Shen, Guohua Xu (2006). Physiological and Molecular Responses of Nitrogen-starved Rice Plants to Re-supply of Different Nitrogen Sources. Plant and Soil.DOI
Shiwei Guo, Yi Zhou, Na SONG, Qirong Shen (2006). Some Physiological Processes Related to Water Use Efficiency of Higher Plants. Agricultural Sciences in China.DOI
Jinkui Luo, Shubin Sun, Lijun Jia, Wei Chen, Qirong Shen (2006). The Mechanism of Nitrate Accumulation in Pakchoi [Brassica Campestris L.ssp. Chinensis(L.)]. Plant and Soil.DOI
Xiaorong Fan, R. Gordon‐Weeks, Qirong Shen, Tony Miller (2006). Glutamine transport and feedback regulation of nitrate reductase activity in barley roots leads to changes in cytosolic nitrate pools. Journal of Experimental Botany.DOI
Qirong Shen (2006). Progress in Research on Ammonia Volatilization From Plant Leaves. Shengtai yu nongcun huanjing xuebao.
Qirong Shen (2006). Effects of Dissolved Organic Matter on Nitrification in Soil. Shengtai yu nongcun huanjing xuebao.
Qirong Shen (2006). Effect of Rice Cultivated in Aerobic Soil with Mulching on Post Barely Growth and Soil Nitrogen.
Qirong Shen (2006). Effects of Different Nitrogen Supply Forms on Drought Resistance of Paddy Plants. Arid Zone Research.
Xiaorong Fan, Qirong Shen, Zhengqiang Ma, Huilan Zhu, Xiaoming Yin, Tony Miller (2005). A comparison of nitrate transport in four different rice (Oryza sativa L.) cultivars. Science in China Series C Life Sciences.DOI
Yangchun Xu, Yali Zhang, Qirong Shen, Yong Gang Xu, Juan Zhang (2005). An innovative method for the treatment of rice straw to improve nitrogen uptake efficiency. Biology and Fertility of Soils.DOI
Qirong Shen, Yong Gang Xu, Hong Yang, Lixiang Zhou, YU Qing, Zhi-Ping Zhou (2005). [Spectral analysis of dissolved organic matter derived from rice straw after chemical treatment]. PubMed.
Qirong Shen (2005). Distribution and Remobilization of Nitrate in Two Cultivars of Pakchoi Plant. Zhongguo nongye Kexue.
Qirong Shen (2005). Technology for chemical degradation of chicken feathers. Nongcun shengtai huanjing.
Fei Yuan, Wei Ran, Qirong Shen, Dezhi Wang (2004). Characterization of nitrifying bacteria communities of soils from different ecological regions of China by molecular and conventional methods. Biology and Fertility of Soils.DOI
Yuan-Qiu He, Qirong Shen, Hongmin Kong, Yousheng Xiong, Xingxiang Wang (2004). Effect of Soil Moisture Content and Phosphorus Application on Phosphorus Nutrition of Rice Cultivated in Different Water Regime Systems. Journal of Plant Nutrition.DOI
Xiaoqing Qian, Qirong Shen, Guohua Xu, Juanjuan Wang, Mingyao Zhou (2004). Nitrogen Form Effects on Yield and Nitrogen Uptake of Rice Crop Grown in Aerobic Soil. Journal of Plant Nutrition.DOI
Qirong Shen, Guixin Chu (2004). Bi-directional nitrogen transfer in an intercropping system of peanut with rice cultivated in aerobic soil. Biology and Fertility of Soils.DOI
Yingchun Xu, Qirong Shen, M. L. Li, Klaus Dittert, Burkhard Sattelmacher (2004). Effect of soil water status and mulching on N 2 O and CH 4 emission from lowland rice field in China. Biology and Fertility of Soils.DOI
Qirong Shen (2004). Effect and Mechanism of Phenol Compounds in Alleviating Cucumber Fusarium Wilt. Zhongguo nongye Kexue.
Yongchao Liang, Yanfang Yang, Chaoguang Yang, Qirong Shen, Jianmin Zhou, Linzhang Yang (2003). Soil enzymatic activity and growth of rice and barley as influenced by organic manure in an anthropogenic soil. Geoderma.DOI
Qirong Shen (2003). Effects of ABA and IAA on the Behavior of Stomata of Rice Crop Cultivated in Aerobic Soil Condition. Zhongguo nongye Kexue.
Qirong Shen (2003). Effects of earthworm on soil C, N on upland-rice soil under different manipulations of corn straw.
Yangchun Xu, Qirong Shen, Wei Ran (2002). Content and distribution of forms of organic N in soil and particle size fractions after long-term fertilization. Chemosphere.DOI
Qirong Shen, Zhenguo Shen (2001). Effects of pig manure and wheat straw on growth of mung bean seedlings grown in aluminium toxicity soil. Bioresource Technology.DOI
Yongchao Liang, Qirong Shen, Zhenguo Shen, Tongsheng Ma (1996). Effects of silicon on salinity tolerance of two barley cultivars. Journal of Plant Nutrition.DOI
Qirong Shen (1993). Effect of Incorporation of Wheat Straw and Urea into Soil on Biomass Nitrogen and Nitrogen-Supplying Characteristics of Paddy Soil.
Nan Zhang, Zhengqi Wang, Weibing Xun, Xinli Sun, Jingjing Wang, Qiang Zheng, Zhihui Xu, Youzhi Miao, Ruifu Zhang, Qirong Shen (2025). In vivo plant-bacteria interaction rather than root exudates exploitation determines the evolution of bacterial rhizosphere adaptation. Research Square.DOI
Ningqi Wang, Gaofei Jiang, Yugang Hou, Changqin Li, Meng Yuanduo, Peijie Chen, Yuling Zhang, Tianjie Yang, Xiaofang Wang, Xinlan Mei, Thomas Pommier, Samiran Banerjee, Matthias C. Rillig, Francisco Dini‐Andreote, Ville‐Petri Friman, Yangchun Xu, Alexandre Jousset, Qirong Shen, Zhong Wei (2025). Spatiotemporal changes in soil properties predict plant health at continental scale. bioRxiv (Cold Spring Harbor Laboratory).DOI
Zhen Meng, Zijian Lv, Xue Wang, Jian Zhang, Guoxin Bai, Hongjun Liu, Rong Li, Qirong Shen (2023). From waste to growth: tea residue recycling through Trichoderma's solid-state fermentation for tea cuttings. Research Square.DOI
Zhihui Xu, Xinli Sun, Jiyu Xie, Daoyue Zheng, Riyan Xia, Wei Wang, Weibing Xun, Qiwei Huang, Ruifu Zhang, Ákos T. Kovács, Qirong Shen (2023). Keystone species determine the productivity of synthetic microbial biofilm communities. Research Square.DOI
Yan Liu, Zhihui Xu, Weibing Xun, Polonca Štefanič, Tianjie Yang, Youzhi Miao, Nan Zhang, Ruifu Zhang, Qirong Shen, Ines Mandić-Mulec (2023). Plant beneficial bacterium promotes plant growth by altering social networks of bacteria in the rhizosphere. Research Square.DOI
Xu QM, Bin Liu, Yingying Wan, Xueting Jiang, Dongmei Mao, Gang Chen, Dan Cheng, Jian He, Qirong Shen (2023). Paenibacillus jiangxiensis sp. nov., isolated from lakeside soil. Research Square.DOI
Yizhu Qiao, Qiwei Huang, Meijie Qi, He Zhang, Qicheng Xu, Qirong Shen, Ning Ling (2022). Nutrient status changes bacterial interactions in a synthetic community.DOI
Mengmeng Wang, Jiaxi Miao, Xuanqing Wang, Tuo Li, Han Zhu, Dongyang Liu, Qirong Shen (2020). Genomic and transcriptome analyses of a thermophilic bacterium Geobacillus stearothermophilus B5 isolated from compost reveal its enzymatic basis for lignocellulose degradation. Research Square.DOI
Yalong Kang, Xiangrui An, Yanwei Ma, Yan Li, Wenli Wu, Caixia Dong, Yangchun Xu, Qirong Shen (2020). A split supply of bio-organic and chemical fertilizer synergistically affects root system architecture and improves above-ground growth in pear tree (Pyrus pyrifolia Nakai).DOI
Zhihui Xu, Ines Mandić-Mulec, Huihui Zhang, Yan Liu, Xinli Sun, Weibing Xun, Nan Zhang, Qirong Shen, Ruifu Zhang (2018). Antibiotic Bacillomycin D Regulates Biofilm Development Through the FeuABC-Dependent Iron Acquisition Pathway. SSRN Electronic Journal.DOI
书籍章节
Zongzhuan Shen, Beibei Wang, Yannan Ou, Shanshan Liu, Chengyuan Tao, Sai Guo, Xuhui Deng, Hongjun Liu, Rong Li, Qirong Shen (2025). Banana Disease Suppressive Soils and Mitigation of Panama Disease in China. Springer eBooks.DOI
Min Wang, Qirong Shen, Guohua Xu, Shiwei Guo (2014). New Insight into the Strategy for Nitrogen Metabolism in Plant Cells. International review of cytology.DOI
数据集
X E Wang, Keming Yang, Sara Franco Ortega, Ezra Herman, Bryden Fields, Ningqi Wang, Gaofei Jiang, Y S Zhang, Shaohua Gu, Yangchun Xu, Qirong Shen, Ville‐Petri Friman, Zhong Wei (2026). Data from: Bacteria-phage coevolution drives variation in bacterial wilt disease incidence via resistance-virulence trade-offs. DRYAD.DOI
Yanwei Xia, Jingfan Wang, Chuanxu Guo, Huanhuan Xu, Wei Wang, Mingzhu Yang, Qirong Shen, Ruifu Zhang, Youzhi Miao (2022). Additional file 1 of Exploring the multi-level regulation of lignocellulases in the filamentous fungus Trichoderma guizhouense NJAU4742 from an omics perspective. Figshare.DOI
Tao Wen, Penghao Xie, C. Ryan Penton, Lauren E. Hale, Linda S. Thomashow, Shengdie Yang, Zhexu Ding, Yaqi Su, Jun Jie Yuan, Qirong Shen (2022). Additional file 2 of Specific metabolites drive the deterministic assembly of diseased rhizosphere microbiome through weakening microbial degradation of autotoxin. Figshare.DOI
Weibing Xun, Yunpeng Liu, Wei Li, Yi Ren, Wu Xiong, Zhihui Xu, Nan Zhang, Youzhi Miao, Qirong Shen, Ruifu Zhang (2021). Additional file 2 of Specialized metabolic functions of keystone taxa sustain soil microbiome stability. Figshare.DOI