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精选作品

期刊论文

2026

FetalAgents: A Multi-Agent System for Fetal Ultrasound Image and Video Analysis

Xiaotian Hu, Junwei Huang, Mingxuan Liu, Kasidit Anmahapong, Yifei Chen, Yitong Luo, Yiming Huang, Xuguang Bai, Zihan Li, Yi Liao, Haibo Qu, Qiyuan Tian

Lecture notes in computer science

DOI

2026

Maximizing Domain Generalization in Automated Fetal Brain Biometry

Yijin Li, Mingxuan Liu, Le Chang, Hongjia Yang, Kasidit Anmahapong, Xiaotian Hu, Ziang Wang, Yingqi Hao, Haoxiang Li, Yifei Chen, Xuesheng Li, Fenglin Jia, Yi Liao, Haibo Qu, Qiyuan Tian

Lecture notes in computer science

DOI

2026

CoilDrop-MRI: Self-supervised physics-guided MRI reconstruction with coil dropout

Tongxi Song, Ziyu Li, Zihan Li, Wen Zhong, Congyu Liao, Yang Yang, Hua Guo, Wenchuan Wu, Qiyuan Tian

Medical Image Analysis

DOI

2026

Improving the accessibility of deep learning-based denoising for accelerated brain MRI using self-supervised learning and/or transfer learning

Zihan Li, Ziyu Li, Mingxuan Liu, Wei‐Ching Lo, Fenglin Jia, Yitong Luo, Hong‐Hsi Lee, Berkin Bilgiç, Jon̈athan R. Polimeni, Haibo Qu, Qiyuan Tian, Susie Y. Huang

NeuroImage

DOI

2026

MicroKAN: Mapping human brain microstructure using diffusion MRI and adaptive nonlinear modeling

Yifei Chen, Zihan Li, Yuanhan Wang, Yijin Li, Jialan Zheng, Hongjia Yang, Mingxuan Liu, Tolga Çukur, Qiuyun Fan, Ziyu Li, Jie Lu, Qiyuan Tian

NeuroImage

DOI

2026

INSTA: Implicit Neural Spatio-Temporal Atlas from Thick-Slice Clinical Fetal Brain MRI

Xiaotian Hu, Mingxuan Liu, Hongjia Yang, Yijin Li, Yingqi Hao, Haoxiang Li, Yifei Chen, Zihan Li, Juncheng Zhu, Yi Liao, Gang Ning, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2026

View-Conditioned Semi-Supervised Learning for Fetal Cardiac Ultrasound Analysis

Zhanpei Gao, Chenyu Zhang, Mingxuan Liu, Yifei Chen, Xiaotian Hu, Qiyuan Tian

IEEE International Symposium on Biomedical Imaging (ISBI)

DOI

2026

Developmental characteristics of spontaneous activity and functional connectivity in the fetal brain

Jing Liu, Yu Zhang, Lin Chen, Lan Qiu, Hongding Zhang, Yu Zhang, Lekai Luo, Yi Liao, Minglei Ouyang, Xiaoxue Yi, Gang Ning, Hongjia Yang, Qiyuan Tian, Haibo Qu

Cerebral Cortex

DOI

2026

Tensor‐decomposition regularized learning for fast and high‐fidelity multi‐parametric microstructural MR imaging

Wenxin Fan, Jian Cheng, Qiyuan Tian, Rongjie Wu, Juan Zou, Weixin Si, Zan Chen, Shanshan Wang

Medical Physics

DOI

2026

Quality-Label-Free Stack-Level Quality Control Improves Fetal Brain Slice-to-Volume Reconstruction

Mingxuan Liu, Yingqi Hao, Yi Liao, Haoxiang Li, Juncheng Zhu, Hongjia Yang, Yifei Chen, Xuguang Bai, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2026

Complementary Sensitivity of Fixed‐Time and Fixed‐Oscillation Regimes to Exchange and Structural Disorder in the Human Brain Revealed Using Oscillating‐Gradient Diffusion MRI With Ultra‐Strong Gradients

Dongsuk Sung, Kwok‐Shing Chan, Julianna Gerold, Wen Zhong, Jialan Zheng, Qiyuan Tian, Hua Guo, Susie Y. Huang, Hong‐Hsi Lee

Magnetic Resonance in Medicine

DOI

2026

Quality-label-free fetal brain MRI quality control based on image orientation recognition uncertainty

Mingxuan Liu, Yi Liao, Haoxiang Li, Juncheng Zhu, Hongjia Yang, Yingqi Hao, Haibo Qu, Qiyuan Tian

Medical Image Analysis

DOI

2026

Noise2Average: An iterative residual learning strategy for image denoising without clean data

Zihan Li, Ziyu Li, Berkin Bilgiç, Kui Ying, David H. Salat, Jon̈athan R. Polimeni, Hongen Liao, Susie Y. Huang, Qiyuan Tian

Imaging Neuroscience

DOI

2026

Automated Induction of Standardized Reporting Templates from Fetal Brain MRI Free-Text Corpora

Xinfeng Zhang, Mingxuan Liu, Hongjian Yang, Yifei Chen, Juncheng Zhu, Xuguang Bai, Yiming Huang, Yingqi Hao, Zihang Li, Yi Liao, Gang Ning, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2026

PANDA: Patch-based unsupervised deep learning for brain anomaly detection via age prediction in fetal MRI

Yingqi Hao, Mingxuan Liu, Juncheng Zhu, Hongjia Yang, Haoxiang Li, Min Kang, Yan Song, Hua Lai, Xiaoling Zhou, Gang Ning, Yi Liao, Haibo Qu, Qiyuan Tian

Imaging Neuroscience

DOI

2026

XSurfer: Reconstructing Surface Meshes of Cerebral and Cerebellar Cortex from Diverse MRI Data Using Untrained Neural Networks

Haoxiang Li, Mingxuan Liu, Divya Varadarajan, Zhangxuan Hu, Qiyuan Tian, Jon̈athan R. Polimeni

Lecture notes in computer science

DOI

2026

SRNR: Deep learning-based MRI S uper- R esolution using N oisy high-resolution R eference data

Muye Zhang, Hongjia Yang, Zihan Li, Jiaxin Xiao, Wanqing Liu, YuHang He, Ting Yin, Jialan Zheng, Mingxuan Liu, Wei Liu, Congyu Liao, Berkin Bilgiç, Jon̈athan R. Polimeni, Susie Y. Huang, Yi Liao, Ziyu Li, Haibo Qu, Qiyuan Tian

Imaging Neuroscience

DOI

2026

ASTAR: Automated Induction of STAndardized Radiology Reporting Templates from Large-Scale Clinical Free-Text Corpora

Xinfeng Zhang, Mingxuan Liu, Yifei Chen, Juncheng Zhu, Kasidit Anmahapong, Yiming Huang, Yuan Zhang, Hongjia Yang, Yi Liao, Gang Ning, Haibo Qu, Qiyuan Tian

Lecture notes in computer science

DOI

2025

From Free Text to Usable Labels: Privacy-Ensuring Open-weights LLM-Enhanced Clinical Report Extraction for Fetal MRI

Mingxuan Liu, Yijin Li, Juncheng Zhu, Hongjia Yang, Yiming Huang, Haoxiang Li, Yifei Chen, Xuguang Bai, Yi Liao, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2025

FetalExtract-LLM: Structured Information Extraction from Free-Text Fetal MRI Reports Based on Privacy-Ensuring Open-Weights Large Language Models

Mingxuan Liu, Yijin Li, Juncheng Zhu, Hongjia Yang, Yiming Huang, Haoxiang Li, Yifei Chen, Xuguang Bai, Yi Liao, Haibo Qu, Qiyuan Tian

Lecture notes in computer science

DOI

2025

In Vivo Meso‐Scale Whole‐Brain Quantitative Imaging With Tailored MRF on the NexGen 7T Scanner

Xiaozhi Cao, Alexander J. S. Beckett, Congyu Liao, Erica Walker, Zheren Zhu, Yurui Qian, Mengze Gao, Nan Wang, Yimeng Lin, Lisong Gong, Matthew A. McCready, Zhixing Wang, Zhitao Li, An T. Vu, Samantha J Ma, Gabriel Ramos‐Llordén, Qiyuan Tian, Adam B. Kerr, Yang Yang, David A. Feinberg, Kawin Setsompop

Magnetic Resonance in Medicine

DOI

2025

WARPNet: Scale-Wise Autoregressive Cross-Modal Synthesis for Accurate and Detail-Preserving MRI-to-PET Generation

Guanyu Zhou, Yifei Chen, Gaoxiang Ying, Mingxing Liu, Xuguang Bai, Jialan Zheng, Bixiao Cui, Qiyuan Tian, Jie Lu

IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

DOI

2025

Effects of diffusion MRI spatial resolution on human brain short-range association fiber reconstruction and structural connectivity estimation

Jialan Zheng, Ziyu Li, Wen Zhong, Ziang Wang, Zihan Li, Hongjia Yang, Mingxuan Liu, Xiaozhi Cao, Congyu Liao, David H. Salat, Susie Y. Huang, Qiyuan Tian

Imaging Neuroscience

DOI

2025

Diff5T: Benchmarking human brain diffusion MRI with an extensive 5.0 Tesla k-space and spatial dataset

Shanshan Wang, Shichao Yu, Jian Cheng, Sen Jia, Changjun Tie, Jiayu Zhu, Hao Yang Peng, Yijing Dong, Jianzhong He, Fan Zhang, Yaowen Xing, Xiuqin Jia, Qi Yang, Qiyuan Tian, Hua Guo, Guobin Li, Hairong Zheng

Scientific Data

DOI

2025

In vivo cortical microstructure mapping using high-gradient diffusion MRI accounting for intercompartmental water exchange effects

Tanxin Dong, Hong‐Hsi Lee, Han Zang, Hansol Lee, Qiyuan Tian, Liang Wan, Qiuyun Fan, Susie Y. Huang

NeuroImage

DOI

2025

Quantifying axonal features of human superficial white matter from three-dimensional multibeam serial electron microscopy data assisted by deep learning

Qiyuan Tian, Chanon Ngamsombat, Hong‐Hsi Lee, Daniel Raimund Berger, Yuelong Wu, Qiuyun Fan, Berkin Bilgiç, Ziyu Li, Dmitry S. Novikov, Els Fieremans, Bruce Robert Rosen, Jeff William Lichtman, Susie Y. Huang

NeuroImage

DOI

2025

BrainSFUDA: Fetal Brain Extraction from Diffusion-weighted MR Images using Source-free Unsupervised Domain Adaption

Yijin Li, Mingxuan Liu, Junchen Zhu, Hongjia Yang, Jialan Zheng, Ziyu Li, Yi Liao, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2024

Improving microstructure quantification using self-supervised and physics-informed deep learning

Zihan Li, Jialan Zheng, Ziyu Li, Yi Jing, Qiyuan Tian, Hongen Liao

INRIA a CCSD electronic archive server

2024

Bundle-specific tractogram distribution estimation using higher-order streamline differential equation

Yuanjing Feng, Lei Xie, Jingqiang Wang, Qiyuan Tian, Jianzhong He, Qingrun Zeng, Fei Gao

NeuroImage

DOI

2024

Artificial intelligence for neuro MRI acquisition: a review

Hongjia Yang, Guanhua Wang, Ziyu Li, Haoxiang Li, Jialan Zheng, Yuxin Hu, Xiaozhi Cao, Congyu Liao, Huihui Ye, Qiyuan Tian

Magnetic Resonance Materials in Physics Biology and Medicine

DOI

2024

DIMOND: DIffusion Model OptimizatioN with Deep Learning

Zihan Li, Ziyu Li, Berkin Bilgiç, Hong‐Hsi Lee, Kui Ying, Susie Y. Huang, Hongen Liao, Qiyuan Tian

Advanced Science

DOI

2023

Label-free Image Quality Assessment of Fetal Brain MRI with Unsupervised Deep Learning

Mingxuan Liu, Haoxiang Li, Yi Liao, Haibo Qu, Qiyuan Tian

HAL (Le Centre pour la Communication Scientifique Directe)

2023

Diffusion MRI data analysis assisted by deep learning synthesized anatomical images (DeepAnat)

Ziyu Li, Qiuyun Fan, Berkin Bilgiç, Guangzhi Wang, Wenchuan Wu, Jon̈athan R. Polimeni, Karla L. Miller, Susie Y. Huang, Qiyuan Tian

Medical Image Analysis

DOI

预印本

2026

templar: agentic induction and evolution of standardized radiology reporting templates from large-scale clinical corpora

Xiaotian Hu, Mingxuan Liu, Zhonghan Wang, Xinfeng Zhang, Yiming Huang, Ziang Wang, Kasidit Anmahapong, Yijin Li, Yifei Chen, Hongjia Yang, Zihan Li, Qiyuan Tian

arXiv (Cornell University)

DOI

2026

Anatomy-preserving enhancement of fetal brain MRI without clean references

Qiyuan Tian, Yingqi Hao, Mingxuan Liu, Nona Law, Yi Liao, Hongjia Yang, Xiaotian Hu, Juncheng Zhu, Kasidit Anmahapong, Yijin Li, Zihan Li, Yifei Chen, Nan Sun, Rong Hu, Min Kang, Yan Song, Hua Lai, Xiaoling Zhou, Gang Ning, Haibo Qu

Research Square

DOI

2026

A physics-informed foundation model for quantitative diffusion MRI

Zihan Li, Jialan Zheng, Ziyu Li, Xun Yuan, Kasidit Anmahapong, Ziang Wang, Mingxuan Liu, Hongjia Yang, Yifei Chen, Zhuhao Wang, YuHang He, Fang Chen, Rui Li, Huaiqiang Sun, Yi Liao, Congyu Liao, Yang Yang, Haibo Qu, Xue Zhang, Hongen Liao, Qiyuan Tian

arXiv (Cornell University)

DOI

2026

Towards Reliable Fetal Ultrasound Interpretation with Multi-Agent Collaboration

Xiaotian Hu, Mingxuan Liu, Junwei Huang, Kasidit Anmahapong, Yifei Chen, Yiming Huang, Xuguang Bai, Zihan Li, Hongjia Yang, Yingqi Hao, Hong Xu, Yu Jiang, Tian Tian, Yi Liao, Haibo Qu, Qiyuan Tian

arXiv (Cornell University)

DOI

2026

R2AoP: Reliable and Robust Angle of Progression Estimation from Intrapartum Ultrasound

Yuanhan Wang, Yifei Chen, Beining Wu, Mingxuan Liu, Xiaotian Hu, Chunbo Jiang, Yijin Li, Changmiao Wang, Feiwei Qin, Qiyuan Tian

arXiv (Cornell University)

DOI

2026

Annotation-free deep learning for detection and segmentation of fetal germinal matrix-intraventricular hemorrhage in brain MRI

Mingxuan Liu, Yingqi Hao, Yi Liao, Juncheng Zhu, Haoxiang Li, Hongjia Yang, Yifei Chen, Yijin Li, Kasidit Anmahapong, Zihan Li, Jialan Zheng, Min Woo Kang, Yan Song, Hua Lai, 周晓玲, Nan Sun, Rong Hu, Gang Ning, Haibo Qu, Qiyuan Tian

arXiv (Cornell University)

DOI

2026

EXACT: an explainable anomaly-aware vision foundation model for analysis of 3D chest CT

Xuguang Bai, Mingxuan Liu, Tongxi Song, Yifei Chen, Hongjia Yang, Kasidit Anmahapong, Zihan Li, Ying Zhou, Qiyuan Tian

arXiv preprint

2026

Generalizable fetal brain biometry via adaptive artificial intelligence

Yijin Li, Mingxuan Liu, Yi Liao, Le Chang, Hongjia Yang, Kasidit Anmahapong, Xiaotian Hu, Ziang Wang, Yingqi Hao, Haoxiang Li, Yifei Chen, Zihan Li, Ziyu Li, Juncheng Zhu, Min Kang, Yan Song, Hua Lai, Xiaoling Zhou, Dingzhi Yue, Xu Liu, Nan Sun, Rong Hu, Xuesheng Li, Fenglin Jia, Gang Ning, Haibo Qu, Qiyuan Tian

arXiv preprint

2025

AnyAD: Unified Any-Modality Anomaly Detection in Incomplete Multi-Sequence MRI

Changwei Wu, Yifei Chen, Yuxin Du, Mingxuan Liu, Jinying Zong, Beining Wu, Jie Nan Dong, Feiwei Qin, Yunkang Cao, Qiyuan Tian

arXiv (Cornell University)

DOI

2025

SmaRT: Style-Modulated Robust Test-Time Adaptation for Cross-Domain Brain Tumor Segmentation in MRI

Yuanhan Wang, Yifei Chen, Shuo Jiang, Wenjing Yu, Mingxuan Liu, Beining Wu, Jinying Zong, Feiwei Qin, Changmiao Wang, Qiyuan Tian

arXiv preprint

2025

A Large Scale Benchmark for Test Time Adaptation Methods in Medical Image Segmentation

Wenjing Yu, Shuo Jiang, Yifei Chen, Shuo Chang, Yuanhan Wang, Beining Wu, Jie Dong, Mingxuan Liu, Shenghao Zhu, Feiwei Qin, Changmiao Wang, Qiyuan Tian

arXiv preprint

2025

autoPET IV challenge: Incorporating organ supervision and human guidance for lesion segmentation in PET/CT

Junwei Huang, Yingqi Hao, Yitong Luo, Ziyu Wang, Mingxuan Liu, Yifei Chen, Yuanhan Wang, Lei Xiang, Qiyuan Tian

arXiv preprint

2022

3D-EPI Blip-Up/Down Acquisition (BUDA) with CAIPI and Joint Hankel Structured Low-Rank Reconstruction for Rapid Distortion-Free High-Resolution T2* Mapping

Zhifeng Chen, Congyu Liao, Xiaozhi Cao, Benedikt A. Poser, Zhongbiao Xu, Wei-Ching Lo, Manyi Wen, Jaejin Cho, Qiyuan Tian, Yaohui Wang, Yanqiu Feng, Ling Xia, Wufan Chen, Feng Liu, Berkin Bilgic

arXiv preprint

2022

SRNR: Training neural networks for Super-Resolution MRI using Noisy high-resolution Reference data

Jiaxin Xiao, Zihan Li, Berkin Bilgic, Jonathan R. Polimeni, Susie Huang, Qiyuan Tian

arXiv preprint

2022

Wave-Encoded Model-based Deep Learning for Highly Accelerated Imaging with Joint Reconstruction

Jaejin Cho, Borjan Gagoski, Taehyung Kim, Qiyuan Tian, Stephen Robert Frost, Itthi Chatnuntawech, Berkin Bilgic

arXiv preprint

2021

SDnDTI: Self-supervised deep learning-based denoising for diffusion tensor MRI

Qiyuan Tian, Ziyu Li, Qiuyun Fan, Jonathan R. Polimeni, Berkin Bilgic, David H. Salat, Susie Y. Huang

arXiv preprint

2021

SRDTI: Deep learning-based super-resolution for diffusion tensor MRI

Qiyuan Tian, Ziyu Li, Qiuyun Fan, Chanon Ngamsombat, Yuxin Hu, Congyu Liao, Fuyixue Wang, Kawin Setsompop, Jonathan R. Polimeni, Berkin Bilgic, Susie Y. Huang

arXiv preprint

2021

Highly Accelerated EPI with Wave Encoding and Multi-shot Simultaneous Multi-Slice Imaging

Jaejin Cho, Congyu Liao, Qiyuan Tian, Zijing Zhang, Jinmin Xu, Wei-Ching Lo, Benedikt A. Poser, V. Andrew Stenger, Jason Stockmann, Kawin Setsompop, Berkin Bilgic

arXiv preprint

2021

Improving accuracy and uncertainty quantification of deep learning based quantitative MRI using Monte Carlo dropout

Mehmet Yigit Avci, Ziyu Li, Qiuyun Fan, Susie Huang, Berkin Bilgic, Qiyuan Tian

arXiv preprint

2018

High-fidelity, high-isotropic resolution diffusion imaging through gSlider acquisition with B1+ & T1 corrections and integrated ΔB0/Rx shim array

Congyu Liao, Jason Stockmann, Qiyuan Tian, Berkin Bilgic, Nicolas S. Arango, Mary Kate Manhard, William A. Grissom, Lawrence L. Wald, Kawin Setsompop

arXiv preprint

DOI

2018

Highly Accelerated Multishot EPI through Synergistic Machine Learning and Joint Reconstruction

Berkin Bilgic, Itthi Chatnuntawech, Mary Kate Manhard, Qiyuan Tian, Congyu Liao, Stephen F. Cauley, Susie Y. Huang, Jonathan R. Polimeni, Lawrence L. Wald, Kawin Setsompop

arXiv preprint

2016

Learning the image processing pipeline

Haomiao Jiang, Qiyuan Tian, Joyce Farrell, Brian Wandell

arXiv preprint

DOI

书籍章节

2025

Enhance the image: Super resolution in MRI

Ziyu Li, Zihan Li, Haoxiang Li, Qiuyun Fan, Karla L. Miller, Wenchuan Wu, Akshay Sanjay Chaudhari, Qiyuan Tian

Advances in magnetic resonance technology and applications

DOI

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