王栋｜南方医科大学｜学者主页

2026

新型β钛合金椎弓根钉棒固定系统的体外力学测试与有限元分析

李杰，刘毅楠，王栋，李浩鹏，贺西京，卢腾

《南方医科大学学报》

2025

Accurate Transcription Factor Activity Inference to Decipher Cell Identity from Single‐Cell Transcriptomic Data with MetaTF

Yongfei Hu, Yuanyuan Zhu, Guangjue Tang, Ming Shan, Puwen Tan, Ying Yi, Xiyuan Zhang, Man Liu, Xinyu Li, Xinyu Li, Le Wu, Jia Chen, Hailong Zheng, Yan Huang, Xiaobo Li, Xiaobo Li, Xiaobo Li, Dong Wang

Advanced Science

DOI

2025

Biological Data Resources and Machine Learning Frameworks for Hematology Research

Ying Yi, Yongfei Hu, Juanjuan Kang, Qifa Liu, Yan Huang, Dong Wang

Genomics Proteomics & Bioinformatics

DOI

2025

Deep learning-driven survival prediction in pan-cancer studies by integrating multimodal histology-genomic data

Yongfei Hu, Xinyu Li, Ying Yi, Yan Huang, Guangyu Wang, Dong Wang

Briefings in Bioinformatics

DOI

2024

Comprehensive Translatomic Analysis of Multiple Myeloma Unveils Novel Insights into Disease Pathogenesis

Lirong Liu, Le Wu, Xinyu Li, Xiaoyun Jin, Xiao‐Ya Chen, Guangjue Tang, Huixing Zhou, Yuan Jian, Wen-Ming Chen, Guangzhong Yang, Yan Huang, Fang Wang, Jia Yu, Wen Gao, Dong Wang

Blood

DOI

2024

RNALocate v3.0: Advancing the Repository of RNA Subcellular Localization with Dynamic Analysis and Prediction

Le Wu, Luqi Wang, Shijie Hu, Guangjue Tang, Jia Chen, Ying Yi, Hailong Xie, Jiahao Lin, Mei Wang, Dong Wang, Bin Yang, Yan Huang

Nucleic Acids Research

DOI

2024

RIscoper 2.0: A deep learning tool to extract RNA biomedical relation sentences from literature

Hailong Zheng, Linfu Xu, Hailong Xie, Jiajing Xie, Yapeng Ma, Yongfei Hu, Le Wu, Jia Chen, Meiyi Wang, Ying Yi, Yan Huang, Dong Wang

Computational and Structural Biotechnology Journal

DOI

2023

Hyperhomocysteinemia lowers serum testosterone concentration via impairing testosterone production in Leydig cells

Zhiyuan Su, Zhuoliang Liu, Wenjing Lei, Kai Xia, An Xiao, Zheng Hu, Miaomiao Zhou, Fengxin Zhu, Jianwei Tian, Manqiu Yang, Dong Wang, Andy Peng Xiang, Jing Nie

Cell Biology and Toxicology

DOI

2023

Subcellular RNA distribution and its change during human embryonic stem cell differentiation

Fanqi Zhou, Puwen Tan, Siqi Liu, Le Chang, Jiabin Yang, Mengyao Sun, Yuehong Guo, Yanmin Si, Dong Wang, Jia Yu, Yanni Ma

Stem Cell Reports

DOI

2022

LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism

Tianyuan Liu, Bohao Zou, Manman He, Yongfei Hu, Yiying Dou, Tianyu Cui, Puwen Tan, Shaobin Li, Shuan Rao, Yan Huang, Sixi Liu, Kaican Cai, Dong Wang

Briefings in Bioinformatics

DOI

2022

Artificial intelligence and its applications in digital hematopathology

Yongfei Hu, Yinglun Luo, Guangjue Tang, Yan Huang, Juanjuan Kang, Dong Wang

Blood Science

DOI

2022

Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation

Fang Wang, Puwen Tan, Pengcheng Zhang, Yue Ren, Jie R Zhou, Yunqiao Li, Siyuan Hou, Shuaili Li, Linlin Zhang, Yanni Ma, Chaojie Wang, Wanbo Tang, Xiaoshuang Wang, Yue Huo, Yongfei Hu, Tianyu Cui, Chao Niu, Dong Wang, Bing Liu, Yu Lan, Jia Yu

Science Advances

DOI

2021

Tag-seq: a convenient and scalable method for genome-wide specificity assessment of CRISPR/Cas nucleases

Hongxin Huang, Yongfei Hu, Guanjie Huang, Shufeng Ma, Jianqi Feng, Dong Wang, Ying Lin, Jiajian Zhou, Zhili Rong

Communications Biology

DOI

2021

MiniCAFE, a CRISPR/Cas9-based compact and potent transcriptional activator, elicits gene expression in vivo

Xin Zhang, Sihan Lv, Zhenhuan Luo, Yongfei Hu, Xin Peng, Jie Lv, Shanshan Zhao, Jianqi Feng, Guanjie Huang, Qin-Li Wan, Jun Liu, Hongxin Huang, Bing Luan, Dong Wang, Xiaoyang Zhao, Ying Lin, Qinghua Zhou, Zhen‐Ning Zhang, Zhili Rong

Nucleic Acids Research

DOI

2021

Single-cell RNA-seq reveals fibroblast heterogeneity and increased mesenchymal fibroblasts in human fibrotic skin diseases

Cheng‐Cheng Deng, Yongfei Hu, Dingheng Zhu, Qing Cheng, Jingjing Gu, Qing‐Lan Feng, Li-Xue Zhang, Yingping Xu, Dong Wang, Zhili Rong, Bin Yang

Nature Communications

DOI

2021

Cellinker: a platform of ligand–receptor interactions for intercellular communication analysis

Yang Zhang, Tianyuan Liu, Jing Wang, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Ning Lin, Bingyi Wu, Xiaoyang Zhao, Dong Wang

Bioinformatics

DOI

2021

Deciphering the autophagy regulatory network via single-cell transcriptome analysis reveals a requirement for autophagy homeostasis in spermatogenesis

Mei Wang, Yanwen Xu, Yuncong Zhang, Yuhan Chen, Gang Chang, Geng An, Xinyan Yang, Caihong Zheng, Jiexiang Zhao, Zhaoting Liu, Dazhuang Wang, Kai Miao, Shuan Rao, Meng Dai, Dong Wang, Xiaoyang Zhao

Theranostics

DOI

2020

hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf

Xue Lian Wang, Changyun Ping, Puwen Tan, Chenguang Sun, Guang Liu, Tao Liu, Shuchun Yang, Yanmin Si, Lijun Zhao, Yongfei Hu, Yuyan Jia, Xiaoshuang Wang, Meili Zhang, Fang Wang, Dong Wang, Jia Yu, Yanni Ma, Yue Huang

The EMBO Journal

DOI

2020

ARID3A promotes the development of colorectal cancer by upregulating AURKA

Jing Tang, Lirui Yang, Yafei Li, Xuelian Ning, Anita Chaulagain, Tianzhen Wang, Dong Wang

Carcinogenesis

DOI

2020

cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function

Yan Huang, Jing Wang, Yue Zhao, Hua‐Feng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Ning Lin, Yong Zhang, Dong Wang, Yang Zhang

Nucleic Acids Research

DOI

2020

Enhancing site-specific DNA integration by a Cas9 nuclease fused with a DNA donor-binding domain

Shufeng Ma, Xinlong Wang, Yongfei Hu, Jie Lv, Chengfang Liu, Kaitong Liao, Xiaohua Guo, Dong Wang, Ying Lin, Zhili Rong

Nucleic Acids Research

DOI

2020

Design powerful predictor for mRNA subcellular location prediction inHomo sapiens

Zhao‐Yue Zhang, Yuhe Renee Yang, Hui Ding, Dong Wang, Wei Chen, Hao Lin

Briefings in Bioinformatics

DOI

2019

新型解剖型钛笼可提高终板的支撑强度:基于影像学及生物力学方法

卢腾，高中洋，贺西京，李家良，刘宁，梁辉，王一斌，闻志靖，张廷，王栋，李浩鹏

《南方医科大学学报》

2019

RIscoper: a tool for RNA–RNA interaction extraction from the literature

Yang Zhang, Tianyuan Liu, Liqun Chen, Jinxurong Yang, Jiayi Yin, Yuncong Zhang, Zhixi Yun, Hao Xu, Ning Lin, Feng‐Biao Guo, Yongshuai Jiang, Hao Lin, Dong Wang, Yan Huang, Jian Hua Huang

Bioinformatics

DOI

2019

Exploiting locational and topological overlap model to identify modules in protein interaction networks

Lixin Cheng, Pengfei Liu, Dong Wang, Kwong‐Sak Leung

BMC Bioinformatics

DOI

2017

颈前路融合手术对相邻节段影响的有限元分析

卢腾，张廷，董军，臧全金，杨宝辉，王栋，李浩鹏，贺西京

《南方医科大学学报》

2008

成年大鼠脊髓损伤后反应性星形胶质细胞增生和巢蛋白表达的相关性及意义

杨平林，贺西京，李浩鹏，兰宾尚，王栋，王国毓，徐思越，刘亦恒

《南方医科大学学报》

2006

颈椎前路减压阶梯状植骨可吸收螺钉内固定的生物力学稳定性研究

张健，贺西京，李浩鹏，王栋，赵卫东

《南方医科大学学报》

王栋

精选作品

期刊论文

新型β钛合金椎弓根钉棒固定系统的体外力学测试与有限元分析

Accurate Transcription Factor Activity Inference to Decipher Cell Identity from Single‐Cell Transcriptomic Data with MetaTF

Biological Data Resources and Machine Learning Frameworks for Hematology Research

Deep learning-driven survival prediction in pan-cancer studies by integrating multimodal histology-genomic data

Comprehensive Translatomic Analysis of Multiple Myeloma Unveils Novel Insights into Disease Pathogenesis

RNALocate v3.0: Advancing the Repository of RNA Subcellular Localization with Dynamic Analysis and Prediction

RIscoper 2.0: A deep learning tool to extract RNA biomedical relation sentences from literature

Hyperhomocysteinemia lowers serum testosterone concentration via impairing testosterone production in Leydig cells

Subcellular RNA distribution and its change during human embryonic stem cell differentiation

LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism

Artificial intelligence and its applications in digital hematopathology

Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation

Tag-seq: a convenient and scalable method for genome-wide specificity assessment of CRISPR/Cas nucleases

MiniCAFE, a CRISPR/Cas9-based compact and potent transcriptional activator, elicits gene expression in vivo

Single-cell RNA-seq reveals fibroblast heterogeneity and increased mesenchymal fibroblasts in human fibrotic skin diseases

Cellinker: a platform of ligand–receptor interactions for intercellular communication analysis

Deciphering the autophagy regulatory network via single-cell transcriptome analysis reveals a requirement for autophagy homeostasis in spermatogenesis

hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf

ARID3A promotes the development of colorectal cancer by upregulating AURKA

cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function

Enhancing site-specific DNA integration by a Cas9 nuclease fused with a DNA donor-binding domain

Design powerful predictor for mRNA subcellular location prediction inHomo sapiens

新型解剖型钛笼可提高终板的支撑强度:基于影像学及生物力学方法

RIscoper: a tool for RNA–RNA interaction extraction from the literature

Exploiting locational and topological overlap model to identify modules in protein interaction networks

颈前路融合手术对相邻节段影响的有限元分析

成年大鼠脊髓损伤后反应性星形胶质细胞增生和巢蛋白表达的相关性及意义

颈椎前路减压阶梯状植骨可吸收螺钉内固定的生物力学稳定性研究

预印本

Tumor-induced lipid loss physically accelerates breast cancer invasion into mammary adipose tissue

UMind-VL: A Generalist Ultrasound Vision-Language Model for Unified Grounded Perception and Comprehensive Interpretation

FocalMix: Semi-Supervised Learning for 3D Medical Image Detection

Improve bone age assessment by learning from anatomical local regions

书籍章节

Bioinformatics Technologies in Autophagy Research