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Chengxin Dai, R. Gabriels, R. Bouwmeester, Asier Larrea, Jonas Scheid, H. Webel, Fuchu He, L. Martens, Oliver Kohlbacher, Mingze Bai, Linhai Xie, Timo T. Sachsenberg, Yasset Pérez-Riverol (2026). quantms-rescoring enables deep proteome coverage across protein quantification, immunopeptidomics, and post-translational modifications experiments. bioRxiv.DOI
Hong-Chao Li, Xinshuai Zhang, Huimin Kang, Yun Yang, Xinyu Xiao, Yan Wang, Bin Fu, Jie Chen, Xinwen Dong, Yuanjun Zhai, Jing Yang, Jian-Ming Ying, Fuchu He, Yang Li, Xiaowen Wang (2026). Integrated Single-cell Proteomic and Transcriptomic Landscape of Mouse Folliculogenesis. Genomics, Proteomics & Bioinformatics.DOI
Kunpei Cai, Qing Zeng, Chuanxi Huang, Jing Yang, Fuchu He, Yun Yang (2026). High-throughput Single-cell Proteomics Enabled by Integrating nPOP workflow with Quantitative Hyperplexing. bioRxiv.DOI
Shuyi Feng, Xue-Hui Deng, Ying Xu, Baoyi Qin, Chuanxi Huang, Qingjing Chen, Fuchu He, Dongxue Wang (2026). π-SeqOmics: A Sequential Workflow for Genomic, Transcriptomic, Proteomic, and Phosphoproteomic Profiling From Biopsy-Scale Samples. Molecular & Cellular Proteomics.DOI
Zi-Xuan Li, L. Leng, Jinglei Zhai, Xiaowen Wang, Wuling Yang, Shuhui Wang, Haifeng Wan, Shuo-Ping Zhang, Fei Gong, Xi Liao, Yuhui Li, Qing Zeng, Yan-Su Chen, Zhenyu Xiang, Fei Liu, Fuchu He, Yun Yang, Hong-Mei Wang, Xiaoming Xu, Ge Lin, Chun So (2026). Two distinct causes contribute to the low efficiency of human pre-implantation development. Cell.DOI
Yingying Sun, Jun A, Zhiwei Liu, Rui Sun, Liujia Qian, Samuel H. Payne, Wout Bittremieux, Markus Ralser, Chen Li, Yi Chen, Zhen Dong, Yasset Pérez‐Riverol, Asif Khan, Chris Sander, Ruedi Aebersold, Juan Antonio Vizcaíno, Jonathan R. Krieger, Jianhua Yao, Wen Han, Linfeng Zhang, Yunping Zhu, Yue Xuan, Benjamin B. Sun, Liang Qiao, Henning Hermjakob, Haixu Tang, Huanhuan Gao, Yamin Deng, Qing Zhong, Cheng Chang, Nuno Bandeira, Ming Li, Weinan E, Siqi Sun, Yuedong Yang, Gilbert S. Omenn, Yue Zhang, Ping Xu, Yan Fu, Xiaowen Liu, Christopher M. Overall, Yu Wang, Eric W. Deutsch, Luonan Chen, Jüergen Cox, Vadim Petrovich Demichev, Fuchu He, Jiaxing Huang, Huilin Jin, Chao Liu, Nan Li, Zhongzhi Luan, Jiangning Song, Kaicheng Yu, Wanggen Wan, Tai Wang, Kang Zhang, Le Zhang, Peter A. Bell, Matthias Mann, Bing Zhang, Tiannan Guo (2026). AI proteomics: from protein identification to virtual cells. Nature Methods.DOI
Linlin Wang, Qian Dong, Fuchu He, Zhiwen Gu, Aihua Sun (2026). Beyond bacterial defences: the role of lysozyme in cancer. Clinical and Translational Medicine.DOI
贺福初（2025）. π-HuB开创蛋白质组学新纪元. 《科学新生活》.
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Yingjie Ding, Yue-Sheng Zuo, Bin Zhang, Yan-Ling Fan, Gang Xu, Zhongyi Cheng, Shuai Ma, Shuaiqi Fang, Aodi Tian, Dandan Gao, Xi Xu, Qiao-Ran Wang, Yao-Bin Jing, Mengmeng Jiang, M. Xiong, Jia-Ming Li, Zi-Chu Han, Shu-Hui Sun, Si Wang, Fuchu He, Jia-Yin Yang, J. Qu, Wei-Qi Zhang, Guangsheng Liu (2025). Comprehensive human proteome profiles across a 50-year lifespan reveal aging trajectories and signatures. Cell.DOI
Jia-Ming Li, Mengmeng Jiang, Qiaoran Wang, Zi-Kai Zheng, Jianghua Shen, Jingyi Li, M. Xiong, Yandong Zheng, Xiao-Yong Lu, Yu-Sheng Cai, Yan-Ling Fan, Lingling Geng, Qian-Zhao Ji, Q. Peng, Shu-Hui Sun, Yuan-Yuan Wang, Zi-Juan Xin, K. Yan, Yuan-Hang Yang, Jun Yu, Haoteng Yan, Ding Ai, Yong-Ping Bai, Yan Bi, Xiuwu Bian, Peng-Cheng Bu, Jian-Ping Cai, Chun-Mei Cao, Feng Cao, Zhongwei Cao, R. Chai, Piu Chan, Chang Chen, Cheng-Shui Chen, Chun-Ying Chen, Di Chen, Houzao Chen, Lin Chen, Quan Chen, Xiao Chen, Xiao-Chun Chen, Yu Chen, Zi-Jiang Chen, Weimin Ci, Zhe Dai, Qiu-Rong Ding, Bi-Rong Dong, Jiahong Dong, Jian-Gao Fan, Shi-Qing Feng, Xin Feng, Yun Feng, Xiao-Bing Fu, Xiao-Long Fu, Feng Gao, Jiangang Gao, Qiang Gao, Shao-Rong Gao, Yonghao Gu, You-Fei Guan, Feifan Guo, Jing-Dong J. Han, Hai-Ping Hao, Ji-Hui Hao, Fuchu He, Jin-Han He, Ming He, Ming-Guang He, Qi-Yang He, Zhiying He, Zu-Hong He, Huashan Hong, Jiaxu Hong, Sheng-Ping Hou, Cheng Hu, Ping Hu, Zhi-Bin Hu, Can-Hua Huang, Jun Huang, Kai Huang, Pengyu Huang, Xun-Ming Ji, Yong Ji, Shunji Jia, Hong Jiang, Wenjian Jiang, Lingjing Jin, Zi-Dan Jin, Sheng-Hong Ju, Zhenyu Ju, Qingpeng Kong, Wei Kong, W. Kong, Xiangqing Kong, G. Lei, Geng-Lin Li, Ji Li, Jian Li, Meng-Feng Li, Rong Li, Wei Li, Wei Li, Xiao-Jun Li, Xin Li, Qing-Feng Liang, Zhen Liang, Haotian Lin, Baohua Liu, Cai-Yue Liu, Changsheng Liu, Feng-Rong Liu, Jian-Feng Liu, Jun-Ping Liu, Ke Liu, Lin Liu, Ping-Sheng Liu, Qiang Liu, Qiang Liu, Tie-Min Liu, Wenwen Liu, Xing-Guo Liu, Ya-Jun Liu, Yong Liu, You-Hua Liu, You-Shuo Liu, Zhi-Li Liu, Xiao Long, Yao Lu, Jian Luo, Xianghang Luo, Chun-Hong Ma, Shuai Ma, Xin-Ran Ma, Jian-Hua Mao, Z. Mao, Shyh-Chang Ng, Gung-Jun Nie, Yu-Yu Niu, Yaojin Peng, Jun Pu, J. Qi, Li Qiang, Jie Qiao, Ying-Ying Qin, Ai-Juan Qu, Jing Qu, Jie Ren, Ruibao Ren, Xiong-Zhong Ruan, Anbing Shi, Hai-Bo Shi, Jie Shi, Kwok-Fai So, Mo-Shi Song, Weihong Song, Song-Yang Zhou, Jia-Can Su, A. Sun, Liang Sun, Qiang Sun, Y. Sun, Yu Sun, Pei-Fu Tang, Qiqun Tang, Yi Tang, Jun Tao, Ling Tao, Mei Tian, Xiao-Li Tian, Ye Tian, Xiao-Lin Tong, Cong-Yi Wang, Hai-Bo Wang, Hong-Mei Wang, Hua-Ting Wang, Jia-Nan Wang, Jian-Wei Wang, Jian-Wei Wang, Ji-Qiu Wang, Li-Heng Wang, Lin Wang, Miao Wang, Qiang Wang, Si Wang, Sijia Wang, Songling Wang, Wengong Wang, Xiao-Mei Wang, Xiao-Ning Wang, Yan Wang, Yan-Jiang Wang, Yuan Wang, Yun-Fang Wang, Zhen-Ning Wang, Xia-Wei Wei, Jianping Weng, Hai-Tao Wu, Ji-Hong Wu, Xiaohua Xia, Yang Xia, A. Xiang, Guo-Zhi Xiao, Jun-Jie Xiao, Yi-Chuan Xiao, Z. Xiao, Zheng-Wei Xie, Wei Xiong, Aimin Xu, Hua Xu, Lingyan Xu, Ming Xu, Liying Yan, Jia-Yin Yang, Ji-Chun Yang, Liu Yang, Yun-Gui Yang, Ze Yang, Zheng-Lin Yang, Hongjie Yao, Jing Ye, C. Yi, Fan Yi, Hong-Hua Yu, Yang Yu, Zhen Yu, Ti-Fei Yuan, Jirong Yue, Rui Yue, Chen Zhang, Chun-Xiang Zhang, Cun-Tai Zhang, Feng Zhang, Hongbo Zhang, Hong-Jia Zhang, Hui-Jie Zhang, J Zhang, Jingjing Zhang, Li-cheng Zhang, Lingqiang Zhang, Luoying Zhang, Qing-Jiong Zhang, Wei Zhang, Wei-Ping J. Zhang, Xin Zhang, Xuan Zhang, Yong Zhang, Yun-Wu Zhang, Zhan-Jun Zhang, Zhuo-Hua Zhang, Bing Zhao, Guo-Guang Zhao, Jiajun Zhao, Meng Zhao, Tong-Biao Zhao, Jia-Lin C. Zheng, Jun Zheng, Zhuo-Zhao Zheng, Huixia Zhou, Lili Zhou, Xiang-Tian Zhou, Yong-Sheng Zhou, Zhongjun Zhou, Lan Zhu, Yi-Zhun Zhu, Zhiming Zhu, Wen-Juan Zhuang, Weiguo Zou, Wei-Qi Zhang, Gang Pei, Guang-Hui Liu (2025). The X-Age Project to construct a Chinese aging clock. Nature Aging.DOI
Qi-Qing He, Qingjing Chen, Dongxue Wang, Fuchu He (2025). ZnCl2 Precipitation-Assisted Sample Preparation for Proteomic Analysis. Bio-protocol.DOI
Chun-Xiao Wei, Qiuxia Zhang, Changying Fu, Y. Leng, Chuanxi Huang, Fuchu He, Yun Yang (2025). Simple, Fast and Highly Efficient One-or Two-step Proteomic Preparation Enables Deep Profiling of Microgram-level FF and FFPE Tissues. bioRxiv.DOI
Hui Zhang, Hai-Lu Zhang, Chuanxi Huang, Qing Zeng, Chunyan Tian, Jing Yang, Fuchu He, Yun Yang (2025). Deep Profiling of Oocyte Aging Enabled by Simple One-Step Vial-Based Pretreatment and Single-Cell Proteomics. JACS Au.DOI
Yingying Sun, A. Jun, Zhiwei Liu, Rui Sun, Liujia Qian, Samuel H. Payne, Wout Bittremieux, M. Ralser, Chen Li, Yi Chen, Zhen Dong, Yasset Pérez-Riverol, Asif Khan, Chris Sander, Ruedi Aebersold, J. Vizca'ino, Jonathan R Krieger, Jianhua Yao, Han Wen, Lin-Feng Zhang, Yun-Ping Zhu, Yue Xuan, Benjamin B. Sun, L. Qiao, Henning Hermjakob, Haixu Tang, Huanhuan Gao, Yamin Deng, Qing Zhong, Cheng Chang, Nuno Bandeira, Ming Li, E. Weinan, Siqi Sun, Yuedong Yang, Gilbert S. Omenn, Yue Zhang, Ping Xu, Yan Fu, Xiaowen Liu, Christopher M. Overall, Yu Wang, Eric W. Deutsch, Luonan Chen, J. Cox, Vadim Demichev, Fuchu He, Jiaxin Huang, Hui-Lin Jin, Chao Liu, Nan Li, Zhong-Zhi Luan, Jia-Min Song, Kaicheng Yu, Wanggen Wan, Tai-Ang Wang, Kang Zhang, Le Zhang, Peter A. Bell, Matthias Mann, Bing Zhang, Tian-Nan Guo (2025). Strategic priorities for transformative progress in advancing biology with proteomics and artificial intelligence. arXiv.org.DOI
Geyi Zheng, Ling Zhao, Mingxiu Liang, Xiu-Wen Yu, Chuanxi Huang, Fuchu He, Wendong Chen (2025). A Streamlined Sequential Enrichment Strategy for Multi-PTM Profiling from Low Micrograms of Samples. Analytical Chemistry.DOI
Hui Zhang, Qing Zeng, K. Jin, Chuanxi Huang, Yi Liu, Xing Liu, Jing Yang, Han-Bin Ma, Fuchu He, Yun Yang (2025). High-throughput Single-cell Proteomics Enabled by an Integrated Hyperplexing and Automatic Labelling Approach without Fractionation. bioRxiv.DOI
Jun-Feng Huang, Zi-Kai Lin, Hui-Jie Yang, Yushan He, Gongping Shu, Bing-Peng Guo, Gengjia Chen, Jialin Guo, Xiao-Xiao Mao, Baoqing Sun, Fuchu He, Q. Han, Shi-Yue Li (2025). Integrated plasma proteomic drives Risk stratification and phenotypic trajectory in ILD. ILD/DPLD of known origin.DOI
Jing Zhang, Chengming Gao, Haibei Li, Yuying Chen, Liting Yang, Qian Jin, Lan Feng, Xia Wang, Xinyi Liu, Hongxia Chen, Rong Ye, Yuanchao Xue, Huiyun Wang, Mu‐Sheng Zeng, Ming Yang, Huai‐Qiang Ju, Chengzhi Gao, Guangming Zhou, Guangming Zhou, Qi Zhang, Qian Zhang, Geng Qin, Yuanfeng Li, Yahui Wang, Aiqing Yang, Anfeng Si, Qingfeng Song, Fuchu He, Pengbo Cao, Gangqiao Zhou, Gangqiao Zhou (2025). Long Non‐Coding RNA IGFRIL Couples with PTBP1 to Destabilize IGFBP3 mRNA to Promote the IGF1R‐AKT‐mTOR Axis and Hepatocellular Carcinoma. Advanced Science.DOI
Caiping Tian, Lu Sun, Keke Liu, Ling Fu, Yi Zhang, Wendong Chen, Fuchu He, Jing Hui Yang (2025). Proteome-wide ligandability maps of drugs with diverse cysteine-reactive chemotypes. Nature Communications.DOI
Fan Zhang, Yunzhi Wang, Jiajun Zhu, Jinxi Wang, Qiang Li, Jinwen Feng, Mingwei Liu, Kai Li, Jiliang Tan, Rongkui Luo, Huang‐Tian Yang, Yingyong Hou, Fuchu He, Jun Qin, Chen Ding, Wenjun Yang (2025). Region- and Cell-type–Resolved Multiomic Atlas of the Heart. Molecular & Cellular Proteomics.DOI
Chengming Gao, Yahui Wang, Guangming Zhou, Guangming Zhou, Peipei Shi, Jiao Wang, Junjie Wu, Song Liao, Han Yan, Yifei Qiu, Hongbo Yan, Tao Zeng, Ruofan Li, Ying Zhang, Pengbo Cao, Chenning Yang, Jiazhou Ye, Rong Liang, Yuting Wang, Furong Cheng, Kaina Hao, Jinwen Zhang, Xiaoyu Hu, Rui Guo, Qiming Wang, Fuchu He, Yuanfeng Li, Gangqiao Zhou, Gangqiao Zhou (2025). KIF1Bβ suppresses hepatocellular carcinoma by transporting and secreting FBLN5 to attenuate the integrin pathway. Gut.DOI
Zhaoyu Qin, Yan Li, Xiexiang Shao, Kai Li, Yihe Bai, Bing Wang, Fahan Ma, Wenhao Shi, Lei Song, Aojia Zhuang, Fuchu He, Chen Ding, Wenjun Yang (2025). HNF4A functions as a hepatocellular carcinoma oncogene or tumor suppressor depending upon the AMPK pathway activity status. Cancer Letters.DOI
Xinshuai Zhang, Jiacheng Ma, Hong-Chao Li, Yuanjun Zhai, Fuchu He, Xiaowen Wang, Yang Li (2024). OrganogenesisDB: A Comprehensive Database Exploring the Cell‐Type Identities and Gene Expression Dynamics during Organogenesis. Small Methods.DOI
Fuchu He, Ruedi Aebersold, Mark S Baker, Xiuwu Bian, Xiaochen Bo, Daniel W Chan, Cheng Chang, Luo-Nan Chen, Xiangmei Chen, Yu‐Ju Chen, He-Ping Cheng, Ben C. Collins, Fernando J. Corrales, J. Cox, W. E, J. V. Van Eyk, Jia Fan, Pouya Faridi, Daniel Figeys, G. Gao, Wen Gao, Zu-Hua Gao, K. Goda, W. W. Goh, Dongfeng Gu, Changjiang Guo, Tian-Nan Guo, Yuezhong He, A. J. Heck, H. Hermjakob, Tony Hunter, N. G. Iyer, Ying Jiang, C. R. Jimenez, Lokesh Joshi, Neil L. Kelleher, Ming Li, Yang Li, Qingsong Lin, C. Liu, Fan Liu, Guangjian Liu, Yan-Sheng Liu, Zhihua Liu, T. Y. Low, Ben Lu, Matthias Mann, Anming Meng, Robert L. Moritz, Edouard C. Nice, Guang Ning, G. Omenn, Christopher M. Overall, G. Palmisano, Yaojin Peng, Charles Pineau, T. C. W. Poon, Anthony W. Purcell, Jie Qiao, R. Reddel, Phillip J. Robinson, Paola Roncada, Chris Sander, J. Sha, Erwei Song, Sanjeeva Srivastava, A. Sun, S. Sze, Chao Tang, Liujun Tang, Rui-Jun Tian, J. Vizcaíno, Chanjuan Wang, Chen Wang, Xiaowen Wang, Xinxing Wang, Yan Wang, Tobias Weiss, Matthias Wilhelm, Robert Winkler, Bernd Wollscheid, Limsoon Wong, Linhai Xie, Wei Xie, Tao Xu, Tianhao Xu, Liying Yan, Jing Yang, Xiao Yang, John R. Yates, Tao Yun, Qiwei Zhai, Bing Zhang, Hui Zhang, Lihua Zhang, Lingqiang Zhang, Ping-Wen Zhang, Yu-Kui Zhang, Yu-Zi Zheng, Qing Zhong, Yun-Ping Zhu (2024). Author Correction: π-HuB: the proteomic navigator of the human body. Nature.DOI
Hong-Ye Wang, Hui-Xia Gao, Mansheng Li, Linlin Cheng, Xin Zhang, Xiao-Mei Zhang, H. Zhan, Yongmei Liu, Yu-Ling Wang, Jing Ren, Di Hu, Fuchu He, Er-Hei Dai, Yong-Zhe Li, Xiao-Bo Yu (2024). Proteome-Wide Analysis of Antibody Responses in Asymptomatic Omicron BA.2-Infected Individuals at the Amino Acid Resolution. Journal of Proteome Research.DOI
Siqi Wang, Fuchu He, Chunyan Tian, A. Sun (2024). From PROTAC to TPD: Advances and Opportunities in Targeted Protein Degradation. Pharmaceuticals.DOI
Fuchu He, Ruedi Aebersold, Mark S Baker, Xiuwu Bian, Xiaochen Bo, Daniel W Chan, Cheng Chang, Luo-Nan Chen, Xiangmei Chen, Yu-Ju Chen, He-Ping Cheng, Ben C. Collins, Fernando J. Corrales, J. Cox, W. E, J. V. Van Eyk, Jia Fan, Pouya Faridi, Daniel Figeys, G. Gao, Wen Gao, Zu-Hua Gao, K. Goda, W. W. Goh, Dongfeng Gu, Changjiang Guo, T. Guo, Yuezhong He, A. J. Heck, H. Hermjakob, Tony Hunter, N. G. Iyer, Ying Jiang, C. R. Jimenez, Lokesh Joshi, Neil L. Kelleher, Ming Li, Yang Li, Qingsong Lin, C. Liu, Fan Liu, Guang-Hui Liu, Yan-Sheng Liu, Zhihua Liu, T. Y. Low, Ben Lu, Matthias Mann, Anming Meng, Robert L. Moritz, Edouard C. Nice, Guang Ning, G. Omenn, Christopher M. Overall, G. Palmisano, Yaojin Peng, Charles Pineau, T. C. W. Poon, Anthony W. Purcell, Jie Qiao, R. Reddel, Phillip J. Robinson, Paola Roncada, Chris Sander, J. Sha, Erwei Song, Sanjeeva Srivastava, A. Sun, S. Sze, Chao Tang, Liujun Tang, Rui-Jun Tian, J. Vizcaíno, Chanjuan Wang, Chen Wang, Xiaowen Wang, Xinxing Wang, Yan Wang, Tobias Weiss, Matthias Wilhelm, Robert Winkler, Bernd Wollscheid, Limsoon Wong, Linhai Xie, Wei Xie, Tao Xu, Tianhao Xu, Liying Yan, Jing Yang, Xiao Yang, John R. Yates, Tao Yun, Qiwei Zhai, Bing Zhang, Hui Zhang, Lihua Zhang, Lingqiang Zhang, Ping-Wen Zhang, Yu-Kui Zhang, Yu-Zi Zheng, Qing Zhong, Yun-Ping Zhu (2024). π-HuB: the proteomic navigator of the human body. Nature.DOI
Ning Ding, Shang Qu, Linhai Xie, Yi-Fei Li, Zaoqu Liu, Kaiyan Zhang, Yibai Xiong, Yu-Xin Zuo, Zhangren Chen, Ermo Hua, Xing-Tai Lv, You-Bang Sun, Yang Li, Dong Li, Fuchu He, Bowen Zhou (2024). Automating Exploratory Proteomics Research via Language Models. arXiv.org.DOI
Shu‐Kun Tang, Xiao‐Yang Zhi, Yao Zhang, Kira S. Makarova, Bing-Bing Liu, Guosong Zheng, Zhenpeng Zhang, Huajun Zheng, Yuri I. Wolf, Yurong Zhao, Songhao Jiang, Ximing Chen, En-Yuan Li, Tao Zhang, Peiru Chen, Yuzhou Feng, Ming-Xian Xiang, Zhi-Qian Lin, Jiahui Shi, Cheng Chang, Xue Zhang, Rui Li, Kai Lou, Yun Wang, Lei Chang, Min Jean Yin, Ling‐Ling Yang, Huiying Gao, Zhongkai Zhang, Tian‐Shen Tao, Tongwei Guan, Fuchu He, Yinhua Lü, Heng‐Lin Cui, Eugene V. Koonin, Guoping Zhao, Ping Xu (2024). Addendum: Cellular differentiation into hyphae and spores in halophilic archaea. Nature Communications.DOI
Xianfeng Shao, Yuanxuan Huang, Rong Xu, Qiqing He, Min Zhang, Fuchu He, Dongxue Wang (2024). ZASP: A Highly Compatible and Sensitive ZnCl2 Precipitation-Assisted Sample Preparation Method for Proteomic Analysis. Molecular & Cellular Proteomics.DOI
Yiming Zhang, Yingchuan Yang, Yushan Hou, Wei Yan, Xiuyuan Zhang, Xiaofen Huang, Song Qin, Fuchu He, Jian Wang, Aihua Sun, Chunyan Tian (2024). ZNF8 promotes progression of gastrointestinal cancers via a p53-dependent mechanism. Cellular Signalling.DOI
Yanru Meng, Mengxin Zhang, Xinli Li, Xinxin Wang, Qian Dong, Hu Zhang, Yuanjun Zhai, Qin Song, Fuchu He, Chunyan Tian, Aihua Sun (2024). Myeloid cell-expressed MNDA enhances M2 polarization to facilitate the metastasis of hepatocellular carcinoma. International Journal of Biological Sciences.DOI
贺福初（2023）. 大科学计划与国家使命. 《科技导报》.
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Yi Liu, Yun Yang, Wendong Chen, Feng Shen, Linhai Xie, Yingying Zhang, Yuanjun Zhai, Fuchu He, Yunping Zhu, Cheng Chang (2023). DeepRTAlign: toward accurate retention time alignment for large cohort mass spectrometry data analysis. Nature Communications.DOI
Shu‐Kun Tang, Xiao‐Yang Zhi, Yao Zhang, Kira S. Makarova, Bing-Bing Liu, Guosong Zheng, Zhenpeng Zhang, Huajun Zheng, Yuri I. Wolf, Yurong Zhao, Songhao Jiang, Ximing Chen, En-Yuan Li, Tao Zhang, Peiru Chen, Yuzhou Feng, Ming-Xian Xiang, Zhi-Qian Lin, Jiahui Shi, Cheng Chang, Xue Zhang, Rui Li, Kai Lou, Yun Wang, Lei Chang, Min Jean Yin, Ling‐Ling Yang, Huiying Gao, Zhongkai Zhang, Tian‐Shen Tao, Tongwei Guan, Fuchu He, Yinhua Lü, Heng‐Lin Cui, Eugene V. Koonin, Guoping Zhao, Ping Xu (2023). Cellular differentiation into hyphae and spores in halophilic archaea. Nature Communications.DOI
Wenhao Shi, Yushen Wang, Chen Xu, Yan Li, Sai Ge, Bin Bai, Kecheng Zhang, Yunzhi Wang, Nairen Zheng, Juan Wang, Shiqi Wang, Gang Ji, Jipeng Li, Yongzhan Nie, Wenquan Liang, Xiaosong Wu, Jianxin Cui, Yi Wang, Lin Chen, Qingchuan Zhao, Lin Shen, Fuchu He, Jun Qin, Chen Ding (2023). Multilevel proteomic analyses reveal molecular diversity between diffuse-type and intestinal-type gastric cancer. Nature Communications.DOI
Zhaoyu Guo, Pei Jiang, Qian Dong, Yiming Zhang, Kaikun Xu, Yuanjun Zhai, Fuchu He, Chunyan Tian, Aihua Sun (2023). RNF149 Promotes HCC Progression through Its E3 Ubiquitin Ligase Activity. Cancers.DOI
Sha Tian, Dongdong Zhan, Ying Yu, Yunzhi Wang, Mingwei Liu, Subei Tan, Yan Li, Lei Song, Zhaoyu Qin, Xianju Li, Yang Liu, Yao Li, Shuhui Ji, Shanshan Wang, Zhaoyu Qin, Qing‐Yu He, Xingfeng Yin, Lunzhi Dai, Haiteng Deng, Chao Peng, Ping Wu, Minjia Tan, Jing Jiang, Yaoyang Zhang, Yunxia Li, Wenqin Liu, Wei Chen, Rui Wang, Jin Zi, Qidan Li, Mingzhou Bai, Zeng Wang, Zhanlong Mei, Zhongyi Cheng, Jun Zhu, Xuemei Wu, Xing Yang, Yue Zhou, Yuanting Zheng, Fuchu He, Jun Qin, Chen Ding (2023). Quartet protein reference materials and datasets for multi-platform assessment of label-free proteomics. Genome biology.DOI
Zhiwen Gu, Lei Wang, Qian Dong, Kaikun Xu, Jingnan Ye, Xianfeng Shao, Songpeng Yang, Cuixiu Lu, Cheng Chang, Yushan Hou, Yuanjun Zhai, Xinxin Wang, Fuchu He, Aihua Sun (2023). Aberrant LYZ expression in tumor cells serves as the potential biomarker and target for HCC and promotes tumor progression via csGRP78. Proceedings of the National Academy of Sciences.DOI
Ling Fu, Youngeun Jung, Caiping Tian, Renan Barroso Ferreira, Ruifeng Cheng, Fuchu He, Jing Hui Yang, Kate S. Carroll (2023). Nucleophilic covalent ligand discovery for the cysteine redoxome. Nature Chemical Biology.DOI
Aojia Zhuang, Aobo Zhuang, Yijiao Chen, Zhaoyu Qin, Dexiang Zhu, Li Ren, Ye Wei, Pengyang Zhou, Xuetong Yue, Fuchu He, Jianmin Xu, Chen Ding (2023). Proteomic characteristics reveal the signatures and the risks of T1 colorectal cancer metastasis to lymph nodes. eLife.DOI
Aojia Zhuang, Aobo Zhuang, Yijiao Chen, Zhaoyu Qin, Dexiang Zhu, Li Ren, Ye Wei, Pengyang Zhou, Xuetong Yue, Fuchu He, Jianmin Xu, Chen Ding (2023). Author response: Proteomic characteristics reveal the signatures and the risks of T1 colorectal cancer metastasis to lymph nodes.DOI
Jingbo Qie, Yang Liu, Yunzhi Wang, Fan Zhang, Zhaoyu Qin, Sha Tian, Mingwei Liu, Kai Li, Wenhao Shi, Lei Song, Mingjun Sun, Yexin Tong, Ping Hu, Tao Gong, Xiaqiong Wang, Yi Huang, Bolong Lin, Xuesen Zheng, Rongbin Zhou, Jie Lv, Changsheng Du, Yi Wang, Jun Qin, Wenjun Yang, Fuchu He, Chen Ding (2022). Integrated proteomic and transcriptomic landscape of macrophages in mouse tissues. Nature Communications.DOI
Qi Song, Yang Ye, Dongxian Jiang, Zhaoyu Qin, Chen Xu, Haixing Wang, Jie Huang, Lingli Chen, Rongkui Luo, Xiaolei Zhang, Yufeng Huang, Lei Xu, Zixiang Yu, Subei Tan, Minying Deng, Ruqun Xue, Jingbo Qie, Kai Li, Yanan Yin, Xuetong Yue, Xiaogang Sun, Jieakesu Su, Fuchu He, Chen Ding, Yingyong Hou (2022). Proteomic analysis reveals key differences between squamous cell carcinomas and adenocarcinomas across multiple tissues. Nature Communications.DOI
Dianyuan Zhao, Fengjiao Yang, Yang Wang, Site Li, Yang Li, Fei Hou, Wenting Yang, Di Liu, Yuandong Tao, Qian Li, Jing Wang, Fuchu He, Li Tang (2022). ALK1 signaling is required for the homeostasis of Kupffer cells and prevention of bacterial infection. DOAJ (DOAJ: Directory of Open Access Journals).
Yexin Tong, Mingjun Sun, Lingli Chen, Yunzhi Wang, Li Yan, Lingling Li, Xuan Zhang, Yumeng Cai, Jingbo Qie, Yanrui Pang, Ziyan Zoe Xu, Jiangyan Zhao, Xiaolei Zhang, Yang Liu, Sha Tian, Zhaoyu Qin, Jinwen Feng, Fan Zhang, Jiajun Zhu, Yifan Xu, Wenhui Lou, Yuan Ji, Jian‐Yuan Zhao, Fuchu He, Yingyong Hou, Chen Ding (2022). Proteogenomic insights into the biology and treatment of pancreatic ductal adenocarcinoma. Journal of Hematology & Oncology.DOI
Zhihua Wang, Miaomiao Wang, Mengxin Zhang, Kaikun Xu, Xinshuai Zhang, Yi Xie, Yiming Zhang, Cheng Chang, Xiaolu Li, Aihua Sun, Fuchu He (2022). High-affinity SOAT1 ligands remodeled cholesterol metabolism program to inhibit tumor growth. BMC Medicine.DOI
Ji-Xiang He, Zhengcong Fei, Ling Fu, Caiping Tian, Fuchu He, Hao Chi, Jing Hui Yang (2022). A modification-centric assessment tool for the performance of chemoproteomic probes. Nature Chemical Biology.DOI
Yuanxiang Lao, Yanyan Li, Wei Wang, Liangliang Ren, Xiaohong Qian, Fuchu He, Xinguo Chen, Ying Jiang (2022). A Cytological Atlas of the Human Liver Proteome from PROTEOMESKY-LIVERHu 2.0, a Publicly Available Database. Journal of Proteome Research.DOI
Zhongyang Liu, Honglei Li, Zhaoyu Jin, Yang Li, Feifei Guo, Yangzhige He, Xinyue Liu, Yaning Qi, Liying Yuan, Fuchu He, Dong Li (2022). Exploration of Target Spaces in the Human Genome for Protein and Peptide Drugs. Genomics Proteomics & Bioinformatics.DOI
Xiuyuan Zhang, Qijian Zheng, Xiuying Yue, Zhanna Yuan, Jiming Ling, Yanzhi Yuan, Yanying Liang, Aihua Sun, Yuchen Liu, Hui Li, Kaikun Xu, Fuchu He, Jian Wang, Jin Wu, Chunling Zhao, Chunyan Tian (2022). ZNF498 promotes hepatocellular carcinogenesis by suppressing p53-mediated apoptosis and ferroptosis via the attenuation of p53 Ser46 phosphorylation. Journal of Experimental & Clinical Cancer Research.DOI
Xiao Li, Jie Ma, Ling Leng, Mingfei Han, Mansheng Li, Fuchu He, Yunping Zhu (2022). MoGCN: A Multi-Omics Integration Method Based on Graph Convolutional Network for Cancer Subtype Analysis. Frontiers in Genetics.DOI
Mingfei Han, Xian Liu, Wen Jie Zhang, Mengnan Wang, Wenjing Bu, Cheng Chang, Miao Yu, Yingxing Li, Chunyan Tian, Xiaoming Yang, Yunping Zhu, Fuchu He (2021). TSMiner: a novel framework for generating time-specific gene regulatory networks from time-series expression profiles. Nucleic Acids Research.DOI
Mansheng Li, Qiang He, Chunyuan Yang, Jie Ma, Fuchu He, Тао Чен, Yunping Zhu (2021). The protein-protein interaction ontology: for better representing and capturing the biological context of protein interaction. BMC Genomics.DOI
Tao Chen, Jie Ma, Yi Liu, Zhiguang Chen, Nong Xiao, Yutong Lu, Yinjin Fu, Chunyuan Yang, Mansheng Li, Songfeng Wu, Xue Wang, Dongsheng Li, Fuchu He, Henning Hermjakob, Yunping Zhu (2021). iProX in 2021: connecting proteomics data sharing with big data. Nucleic Acids Research.DOI
Haizhu Zhang, Zhaoyu Qin, Xuetong Yue, Yang Liu, Xiaogang Sun, Jinwen Feng, Ziyan Zoe Xu, Jiangyan Zhao, Kai Li, Jian‐Ge Qiu, Wenjun Yang, Fuchu He, Chen Ding (2021). Proteome-wide profiling of transcriptional machinery on accessible chromatin with biotinylated transposons. Science Advances.DOI
Xun Wang, Yang Li, Mengqi He, Xiangren Kong, Peng Jiang, Xi Liu, Lihong Diao, Xinlei Zhang, Honglei Li, Xinping Ling, Simin Xia, Zhongyang Liu, Yuan Liu, Chun‐Ping Cui, Yan Wang, Liujun Tang, Lingqiang Zhang, Fuchu He, Dong Li (2021). UbiBrowser 2.0: a comprehensive resource for proteome-wide known and predicted ubiquitin ligase/deubiquitinase–substrate interactions in eukaryotic species. Nucleic Acids Research.DOI
Jiao Jie Fan, Lifeng Liu, Qingyan Liu, Yu Cui, Binwei Yao, Minghua Zhang, Yabing Gao, Yesheng Fu, Hongmiao Dai, Jingkun Pan, Ya F. Qiu, Cui Hua Liu, Fuchu He, Yu Wang, Lingqiang Zhang (2021). Author Correction: CKIP-1 limits foam cell formation and inhibits atherosclerosis by promoting degradation of Oct-1 by REGγ. Nature Communications.DOI
Zhongyang Liu, Jiale Liu, Xinyue Liu, Xun Wang, Qiaosheng Xie, Xinlei Zhang, Xiangya Kong, Mengqi He, Yuting Yang, Xinru Deng, Lele Yang, Yaning Qi, Jiajun Li, Yuan Liu, Liying Yuan, Lihong Diao, Fuchu He, Dong Li (2021). CTR-DB, an omnibus for patient-derived gene expression signatures correlated with cancer drug response. Nucleic Acids Research.DOI
Yuanfeng Li, Yuehua Ke, Xinyi Xia, Yahui Wang, Fanjun Cheng, Xinyi Liu, Xin Jin, Boan Li, Chengyong Xie, SiYang Maggie Liu, Weijun Chen, Chenning Yang, Yuguang Niu, Ruizhong Jia, Yong Chen, Xiong Liu, Zhihua Wang, Fang Zheng, Yan Jin, Zhen Li, Ning Yang, Pengbo Cao, Hongxia Chen, Jie Ping, Fuchu He, Changjun Wang, Gangqiao Zhou (2021). Genome-wide association study of COVID-19 severity among the Chinese population. Cell Discovery.DOI
Pengbo Cao, Aiqing Yang, Peiyao Li, Xia Xia, Yuqing Han, Guangming Zhou, Guangming Zhou, Fei Yang, Fei Yang, Yuanfeng Li, Ying Cui, Ying Cui, 季洪赞, Lei Lü, Fuchu He, Gangqiao Zhou, Gangqiao Zhou (2021). Genomic gain of RRS1 promotes hepatocellular carcinoma through reducing the RPL11-MDM2-p53 signaling. Science Advances.DOI
Linlin Cheng, Xiaomei Zhang, Yu Chen, Dan Wang, Dong Zhang, Songxin Yan, Hongye Wang, Meng Xiao, Te Liang, Haolong Li, Meng Xu, Xin Hou, Jiayu Dai, Xian Wei Wu, Mingyuan Li, Minya Lu, Dong Wu, Ran Tian, Jing Zhao, Yan Zhang, Wei Cao, Jinglan Wang, Xiaowei Yan, Xiang Zhou, Zhengyin Liu, Yingchun Xu, Fuchu He, Yongzhe Li, Xiaobo Yu, Shuyang Zhang (2021). Dynamic landscape mapping of humoral immunity to SARS-CoV-2 identifies non-structural protein antibodies associated with the survival of critical COVID-19 patients. Signal Transduction and Targeted Therapy.DOI
Zhiwei Liu, Yingluo Liu, Lili Qian, Shangwen Jiang, Xiameng Gai, Shu Ye, Yuehong Chen, Xiaomin Wang, Linhui Zhai, Jun Qiang Xu, Congying Pu, Jing Li, Fuchu He, Min Huang, Minjia Tan (2021). A proteomic and phosphoproteomic landscape of KRAS mutant cancers identifies combination therapies. Molecular Cell.DOI
Limin Shang, Yuehui Zhang, Yuchen Liu, Chaozhi Jin, Yanzhi Yuan, Chunyan Tian, Ming Ni, Xiaochen Bo, Li Zhang, Dong Li, Fuchu He, Jian Wang (2021). A Yeast BiFC-Seq Method for Genome-Wide Interactome Mapping. Genomics Proteomics & Bioinformatics.DOI
Yesheng Fu, Hongtian Wang, Hongmiao Dai, Qiong Zhu, Chun‐Ping Cui, Xiaoxuan Sun, Yanchang Li, Zhikang Deng, Xuemei Zhou, Yingwei Ge, Zhiqiang Peng, Chao Yuan, Bo Wu, Xi Yang, Rongyu Li, Cui Hua Liu, Fuchu He, Wenyi Wei, Lingqiang Zhang (2021). OTULIN allies with LUBAC to govern angiogenesis by editing ALK1 linear polyubiquitin. Molecular Cell.DOI
Wei Hong Tan, Pei Jiang, Wanjun Zhang, Zhaohua Hu, Shaofeng Lin, Lulu Chen, Yingge Li, Changmin Peng, Zhuqing Li, Aihua Sun, Yali Chen, Wenge Zhu, Yu Xue, Yi Yao, Xiangpan Li, Qibin Song, Fuchu He, Weijie Qin, Huadong Pei (2021). Posttranscriptional regulation of de novo lipogenesis by glucose-induced O-GlcNAcylation. Molecular Cell.DOI
Chao Gao, Chong Ma, Huqiang Wang, Haolin Zhong, Jiayin Zang, Rugang Zhong, Fuchu He, Dong Cheol Yang (2021). Intrinsic disorder in protein domains contributes to both organism complexity and clade-specific functions. Scientific Reports.DOI
Ping Xie, Zhiqiang Peng, Yujiao Chen, Hongchang Li, Mengge Du, Yawen Tan, Xin Zhang, Zhe Lü, Chun‐Ping Cui, Cui Hua Liu, Fuchu He, Lingqiang Zhang (2021). Author Correction: Neddylation of PTEN regulates its nuclear import and promotes tumor development. Cell Research.DOI
Pan Shen, Aishi Xu, Yushan Hou, Huqiang Wang, Chao Gao, Fuchu He, Dong Cheol Yang (2021). Conserved paradoxical relationships among the evolutionary, structural and expressional features of KRAB zinc-finger proteins reveal their special functional characteristics. BMC Molecular and Cell Biology.DOI
Qiuyan Lan, Yanchang Li, Fuqiang Wang, Zhaodi Li, Yuan Gao, Lu Hui, Yihao Wang, Zhenwen Zhao, Zixin Deng, Fuchu He, Junzhu Wu, Ping Xu (2021). Deubiquitinase Ubp3 enhances the proteasomal degradation of key enzymes in sterol homeostasis. Journal of Biological Chemistry.DOI
姜颖，张普民，贺福初（2020）. 人类蛋白质组计划研究现状与趋势. 《中国基础科学》.
Shujia Wu, Jinshuai Sun, Xi Wang, Feng Xu, Hao Chi, Yanchang Li, Bowen Zhong, Yuping Xie, Zhonghua Yan, Lei Chang, Dongxue Wang, Fuchu He, Junzhu Wu, Yao Zhang, Ping Xu (2020). Open-pFind Verified Four Missing Proteins from Multi-Tissues. Journal of Proteome Research.DOI
Yinghua Zhao, Lian-Ying Yang, Changqing Sun, Yang Li, Yangzhige He, Li Zhang, Tieliu Shi, Guangshun Wang, Xue-Bo Men, Wei Sun, Fuchu He, Jun Qin (2020). Discovery of Urinary Proteomic Signature for Differential Diagnosis of Acute Appendicitis. BioMed Research International.DOI
Ping Xie, Zhiqiang Peng, Yujiao Chen, Hongchang Li, Mengge Du, Yawen Tan, Xin Zhang, Zhe Lü, Chun‐Ping Cui, Cui Hua Liu, Fuchu He, Lingqiang Zhang (2020). Neddylation of PTEN regulates its nuclear import and promotes tumor development. Cell Research.DOI
Yan Jiang, Chan Xiang, Fan Zhong, Yang Zhang, Liyan Wang, Yuanyuan Zhao, Jiucun Wang, Chen Ding, Jin Li, Fuchu He, Haijian Wang (2020). Histone H3K27 methyltransferase EZH2 and demethylase JMJD3 regulate hepatic stellate cells activation and liver fibrosis. Theranostics.DOI
Qian Li, Hanxing cheng, Yuanping Liu, Xiaowen Wang, Fuchu He, Tang Li (2020). Activation of mTORC1 by LSECtin in macrophages directs intestinal repair in inflammatory bowel disease. Cell Death and Disease.DOI
Subash Adhikari, Edouard Collins Nice, Eric W. Deutsch, Lydie Lane, Gilbert S. Omenn, Stephen R. Pennington, Young‐Ki Paik, Christopher M. Overall, Fernando José Corrales, Ileana M. Cristea, Jennifer E. Van Eyk, Mathias Uhlén, Cecilia Lindskog, Daniel W. Chan, Amos Bairoch, James C. Waddington, Joshua Justice, Joshua LaBaer, Henry Rodriguez, Fuchu He, Markus Kostrzewa, Peipei Ping, Rebekah L. Gundry, Peter Stewart, Sanjeeva Srivastava, Sudhir Srivastava, Fábio César Sousa Nogueira, Gilberto B. Domont, Yves Vandenbrouck, Maggie P. Y. Lam, Sara A. Wennersten, Juan Antonio Vizcaíno, Marc Ronald Wilkins, Jochen M. Schwenk, Emma K. Lundberg, Nuno Bandeira, György Marko‐Varga, Susan T. Weintraub, Charles P. Pineau, Ulrike Kusebauch, Robert L. Moritz, Seong Beom Ahn, Magnus Palmblad, Michael Snyder, Ruedi Aebersold, Mark S. Baker (2020). A high-stringency blueprint of the human proteome. Nature Communications.DOI
Ling Fu, Zongmin Li, Keke Liu, Caiping Tian, Ji-Xiang He, Jingyang He, Fuchu He, Ping Xu, Jing Hui Yang (2020). A quantitative thiol reactivity profiling platform to analyze redox and electrophile reactive cysteine proteomes. Nature Protocols.DOI
Jun‐Yu Xu, Chunchao Zhang, Xiang Wang, Linhui Zhai, Yiming Ma, Yousheng Mao, Kun Qian, Changqing Sun, Zhiwei Liu, Shangwen Jiang, Minghui Wang, Lin Feng, Lei Zhao, Ping Liu, Bo Wang, Xin Zhao, Hui Xie, Xiaoyun Yang, Liyuan Zhao, Yafei Chang, Jingya Jia, Xijun Wang, Yimin Zhang, Yaru Wang, Yikun Yang, Zhixiang Wu, Longhai Yang, Bin Liu, Teng Zhao, Shengguo Ren, Aihua Sun, Yang Chun Zhao, Wantao Ying, Fei Wang, Guangshun Wang, Yi Zhang, Shujun Cheng, Jun Qin, Xiaohong Qian, Yi Wang, Jing Li, Fuchu He, Ting Xiao, Minjia Tan (2020). Integrative Proteomic Characterization of Human Lung Adenocarcinoma. Cell.DOI
Xu Fan, Shan Shan, Peng Wu, Weiran Lin, Jidong Jia, Fuchu He (2020). Irradiated and CCl4‐treated bone marrow‐derived liver macrophages exhibit different gene expression patterns and phenotypes. Scandinavian Journal of Immunology.DOI
Yinghua Zhao, Yang Li, Wei Liu, Wei Liu, Shan Xing, Dan Wang, Jing Chen, Longqin Sun, Jinsong Mu, Wanli Liu, Wanli Liu, Baocai Xing, Wei Sun, Fuchu He (2020). Identification of noninvasive diagnostic biomarkers for hepatocellular carcinoma by urinary proteomics. Journal of Proteomics.DOI
Yanchang Li, Qiuyan Lan, Yuan Gao, Cong Xu, Zhongwei Xu, Yihao Wang, Lei Chang, Junzhu Wu, Zixin Deng, Fuchu He, Daniel Finley, Ping Xu (2020). Ubiquitin Linkage Specificity of Deubiquitinases Determines Cyclophilin Nuclear Localization and Degradation. iScience.DOI
Miao Yan, Huihui Liu, Junhui Xu, Xinan Cen, Qian Wang, Weilin Xu, Wensheng Wang, Zhi-Xiang Qiu, Jin-Ping Ou, Yujun Dong, Ping Zhu, Hanyun Ren, Fuchu He, Mangju Wang (2020). Expression of human Krüppel‐like factor 3 in peripheral blood as a promising biomarker for acute leukemia. Cancer Medicine.DOI
Ling Leng, Jie Ma, Xuer Sun, Baolin Guo, Fanlu Li, Wei Dong Zhang, Mingyang Chang, Jinmei Diao, Yi Wang, Yi Wang, Wenjuan Wang, Shuyong Wang, Yunping Zhu, Fuchu He, Lola McAdams Reid, Yunfang Wang, Yunfang Wang (2020). Comprehensive proteomic atlas of skin biomatrix scaffolds reveals a supportive microenvironment for epidermal development. Journal of Tissue Engineering.DOI
Wenting Yang, Xinyuan Zhao, Yuandong Tao, Yan Ru Wu, Fuchu He, Li Tang (2019). Proteomic analysis reveals a protective role of specific macrophage subsets in liver repair. Scientific Reports.DOI
Jinying Liu, Dezhi Sun, Jiale Liu, Hao Xu, Yuan Liu, Yang Li, Lihong Diao, Xun Wang, Dan Wang, Lei Tian, Huimin Zhang, Zhongyang Liu, Weiquan Ren, Fuchu He, Dong Li, Shuzhen Guo (2019). FibroAtlas: A Database for the Exploration of Fibrotic Diseases and Their Genes. Cardiology Research and Practice.DOI
Mengsha Tong, Chunyu Yu, Jinwen Shi, Wenwen Huang, Sai Ge, Mingwei Liu, Lei Song, Dongdong Zhan, Xia Xia, Wanlin Liu, Jinwen Feng, Wenhao Shi, Jiafu Ji, Jing Gao, Tieliu Shi, Weimin Zhu, Chen Ding, Yi Wang, Fuchu He, Lin Shen, Tingting Li, Jun Qin (2019). Phosphoproteomics Enables Molecular Subtyping and Nomination of Kinase Candidates for Individual Patients of Diffuse-Type Gastric Cancer. iScience.DOI
Jinshuai Sun, Jiahui Shi, Yihao Wang, Shujia Wu, Liping Zhao, Yanchang Li, Hong Wang, Lei Chang, Zhitang Lyu, Junzhu Wu, Fengsong Liu, Wen-Jun Li, Fuchu He, Yao Zhang, Ping Xu (2019). Open-pFind Enhances the Identification of Missing Proteins from Human Testis Tissue. Journal of Proteome Research.DOI
Weide Ma, Dianyuan Zhao, Fuchu He, Li Tang (2019). The Role of Kupffer Cells as Mediators of Adipose Tissue Lipolysis. The Journal of Immunology.DOI
Yanchang Li, Eric B. Dammer, Yuan Gao, Qiuyan Lan, Mark A. Villamil, Duc Minh Duong, Chengpu Zhang, Lingyan Ping, Linda Lauinger, Karin M. Flick, Zhongwei Xu, Wei Wei, Xiaohua Xing, Lei Chang, Jianping Jin, Xuechuan Hong, Yunping Zhu, Junzhu Wu, Zixin Deng, Fuchu He, Peter Kaiser, Ping Xu (2019). Proteomics Links Ubiquitin Chain Topology Change to Transcription Factor Activation. Molecular Cell.DOI
Sheng Wang, Chan Xiang, Lin Mou, Yuan Yang, Rong Zhong, Liyan Wang, Chang Sun, Zhaoyu Qin, Jingmin Yang, Ji Qian, Yuanyuan Zhao, Yi Wang, Xuedong Pan, Jingbo Qie, Yan Jiang, Xiaofeng Wang, Yajun Yang, Weiping Zhou, Xiaoping Miao, Fuchu He, Jin Li, Haijian Wang (2019). Trans-acting non-synonymous variant of FOXA1 predisposes to hepatocellular carcinoma through modulating FOXA1-ERα transcriptional program and may have undergone natural selection. Carcinogenesis.DOI
Geng Qin, Xinyi Tu, Haibei Li, Pengbo Cao, Xi Chen, Song Jin, Hui Han, Yuanfeng Li, Bingqian Guo, Liting Yang, Pandeng Yan, Peiyao Li, Chengming Gao, Jinxu Zhang, Ying Yang, Jian Zheng, Huai‐Qiang Ju, Lei Lü, Xuan Wang, Chaohui Yu, Yi Sun, Baocai Xing, Hongzan Ji, Dongxin Lin, Fuchu He, Gangqiao Zhou (2019). Long Noncoding RNA p53‐Stabilizing and Activating RNA Promotes p53 Signaling by Inhibiting Heterogeneous Nuclear Ribonucleoprotein K deSUMOylation and Suppresses Hepatocellular Carcinoma. Hepatology.DOI
Xun Wang, Lihong Diao, Dezhi Sun, Dan Wang, Jiarun Zhu, Yangzhige He, Yuan Liu, Hao Xu, Yi Zhang, Jinying Liu, Yan Wang, Fuchu He, Yang Li, Dong Li (2019). OsteoporosAtlas: a human osteoporosis-related gene database. PeerJ.DOI
Hao Xu, Yan Wang, Lihong Diao, Xun Wang, Yi Zhang, Jiarun Zhu, Jinying Liu, Jing‐Wen Yao, Zhongyang Liu, Yang Li, Fuchu He, Zhidong Wang, Yuan Liu, Dong Li (2019). UVGD 1.0: a gene-centric database bridging ultraviolet radiation and molecular biology effects in organisms. International Journal of Radiation Biology.DOI
Zhaoyu Qin, Chan Xiang, Fan Zhong, Yang Liu, Qiongzhu Dong, Kai Li, Wenhao Shi, Chen Ding, Lun–Xiu Qin, Fuchu He (2019). Transketolase (TKT) activity and nuclear localization promote hepatocellular carcinoma in a metabolic and a non-metabolic manner. Journal of Experimental & Clinical Cancer Research.DOI
Yihan Peng, Qingchao Liao, Wei Tan, Changmin Peng, Zhaohua Hu, Yali Chen, Zhuqing Li, Jing Li, Bei Zhen, Wenge Zhu, Xiangpan Li, Yi Yao, Qibin Song, Chengsheng Liu, Xiangdong Qi, Fuchu He, Huadong Pei (2019). The deubiquitylating enzyme USP15 regulates homologous recombination repair and cancer cell response to PARP inhibitors. Nature Communications.DOI
Di Liu, Qian Lu, Xing Wang, Jun Wang, Ning Lü, Zefei Jiang, Xiaopeng Hao, Jianbin Li, Jing Liu, Pengbo Cao, Guilin Peng, Yuandong Tao, Dianyuan Zhao, Fuchu He, Tang Li (2019). LSECtin on tumor-associated macrophages enhances breast cancer stemness via interaction with its receptor BTN3A3. Cell Research.DOI
Wenting Yang, Yuandong Tao, Yan Ru Wu, Xinyuan Zhao, Weijie Ye, Dianyuan Zhao, Ling Fu, Caiping Tian, Jing Hui Yang, Fuchu He, Li Tang (2019). Neutrophils promote the development of reparative macrophages mediated by ROS to orchestrate liver repair. Nature Communications.DOI
Ying Jiang, Aihua Sun, Yang Chun Zhao, Wantao Ying, Hui‐Chuan Sun, Xin‐Rong Yang, Baocai Xing, Wei Sun, Liangliang Ren, Bo Hu, Zesong Li, Li Zhang, Guangrong Qin, Menghuan Zhang, Ning Chen, Manli Zhang, Yin Huang, Jinan Zhou, Yan Zhao, Mingwei Liu, Xiao‐Dong Zhu, Yang Qiu, Yanjun Sun, Cheng Huang, Meng Yan, Mingchao Wang, Wei Liu, Fang Tian, Huali Xu, Jian Zhou, Zhenyu Wu, Tieliu Shi, Weimin Zhu, Jun Qin, Lu Xie, Jia Fan, Xiaohong Qian, Fuchu He (2019). Proteomics identifies new therapeutic targets of early-stage hepatocellular carcinoma. Nature.DOI
Jiao Jie Fan, Lifeng Liu, Qingyan Liu, Yu Cui, Binwei Yao, Minghua Zhang, Yabing Gao, Yesheng Fu, Hongmiao Dai, Jingkun Pan, Ya F. Qiu, Cui Hua Liu, Fuchu He, Yu Wang, Lingqiang Zhang (2019). CKIP-1 limits foam cell formation and inhibits atherosclerosis by promoting degradation of Oct-1 by REGγ. Nature Communications.DOI
Mengsha Tong, Chunyu Yu, Dongdong Zhan, Ming Zhang, Bei Zhen, Weimin Zhu, Yi Nuo Wang, Congying Wu, Fuchu He, Jun Qin, Tingting Li (2018). Molecular subtyping of cancer and nomination of kinase candidates for inhibition with phosphoproteomics: Reanalysis of CPTAC ovarian cancer. EBioMedicine.DOI
Mansheng Li, Qiang He, Jie Ma, Fuchu He, Yunping Zhu, Cheng Chang, Тао Чен (2018). PPICurator: A Tool for Extracting Comprehensive Protein–Protein Interaction Information. PROTEOMICS.DOI
Cuitong He, Jinshuai Sun, Jiahui Shi, Yihao Wang, Zhao Jialing, Shujia Wu, Lei Chang, Huiying Gao, Fengsong Liu, Zhitang Lv, Fuchu He, Yao Zhang, Ping Xu (2018). Digging for Missing Proteins Using Low-Molecular-Weight Protein Enrichment and a “Mirror Protease” Strategy. Journal of Proteome Research.DOI
Yu Fang, Hui Li, Wei Sun, Yaju Zhao, Danke Xu, Fuchu He (2018). Selection of aptamers against Lactoferrin based on silver enhanced and fluorescence-activated cell sorting. Talanta.DOI
Yunzhi Wang, Lei Song, Mingwei Liu, Rui Ge, Quan Zhou, Wanlin Liu, Ruiyang Li, Jingbo Qie, Bei Zhen, Yi Wang, Fuchu He, Jun Qin, Chen Ding (2018). A proteomics landscape of circadian clock in mouse liver. Nature Communications.DOI
Xiaowen Wang, Qingyang Dong, Qian Li, Yuanyuan Li, Dianyuan Zhao, Jinjie Sun, Junliang Fu, Fanping Meng, Hu Lin, Junjie Luan, Biao Liu, Min Wang, Fu‐Sheng Wang, Fuchu He, Li Tang (2018). Dysregulated Response of Follicular Helper T Cells to Hepatitis B Surface Antigen Promotes HBV Persistence in Mice and Associates With Outcomes of Patients. Gastroenterology.DOI
Sai Ge, Xia Xia, Chen Ding, Bei Zhen, Quan Zhou, Jinwen Feng, Jiajia Yuan, Rui Chen, Yumei Li, Zhongqi Ge, Jiafu Ji, Lianhai Zhang, Jiayuan Wang, Zhongwu Li, Yumei Lai, Ying Hu, Yanyan Li, Yilin Li, Jing Gao, Lin Chen, Jianming Xu, Chunchao Zhang, Sung Yun Jung, Jong Min Choi, Antrix Jain, Mingwei Liu, Lei Song, Wanlin Liu, Gaigai Guo, Tongqing Gong, Yin Huang, Yang Qiu, Wenwen Huang, Tieliu Shi, Weimin Zhu, Yi Wang, Fuchu He, Lin Shen, Jun Qin (2018). A proteomic landscape of diffuse-type gastric cancer. Nature Communications.DOI
Donghu Zhou, Qianqian Shao, Xu Fan, Peng Wu, Weiran Lin, Handong Wei, Fuchu He, Ying Jiang (2018). Regulation of Tak1 alternative splicing by splice-switching oligonucleotides. Biochemical and Biophysical Research Communications.DOI
Chang Li, Shouwen Du, Mingyao Tian, Yuhang Wang, Jieying Bai, Peng Tan, Wei Yong Liu, Ronglan Yin, Maopeng Wang, Ying Jiang, Yi Li, Na Zhu, Yilong Zhu, Tiyuan Li, Shipin Wu, Ningyi Jin, Fuchu He (2018). The Host Restriction Factor Interferon-Inducible Transmembrane Protein 3 Inhibits Vaccinia Virus Infection. Frontiers in Immunology.DOI
Jinying Liu, Yuan Liu, Dan Wang, Mengqi He, Lihong Diao, Zhongyang Liu, Yang Li, Tang Li, Fuchu He, Dong Li, Shuzhen Guo (2018). AllerGAtlas 1.0: a human allergy-related genes database. Database.DOI
Dong Cheol Yang, Aishi Xu, Pan Shen, Chao Gao, Jiayin Zang, Chen Qiu, Hongsheng Ouyang, Ying Jiang, Fuchu He (2018). A two-level model for the role of complex and young genes in the formation of organism complexity and new insights into the relationship between evolution and development. EvoDevo.DOI
Juncheng Wei, Lu Chen, Fei Li, Yanzhi Yuan, Yajun Wang, Wanjun Xia, Yuehui Zhang, Yuanming Xu, Zhao Yang, Beixue Gao, Chaozhi Jin, Johanna Melo‐Cardenas, Richard M. Green, Hui Pan, Jian Wang, Fuchu He, Kezhong Zhang, Deyu Fang (2018). HRD1‐ERAD controls production of the hepatokine FGF21 through CREBH polyubiquitination. The EMBO Journal.DOI
Zaopeng Yang, Qian Li, Xin Wang, Xuepei Jiang, Dianyuan Zhao, Xin Lin, Fuchu He, Tang Li (2018). C-type lectin receptor LSECtin-mediated apoptotic cell clearance by macrophages directs intestinal repair in experimental colitis. Proceedings of the National Academy of Sciences.DOI
Jinshuai Sun, Jiahui Shi, Yihao Wang, Yang Chen, Yanchang Li, Degang Kong, Lei Chang, Fengsong Liu, Zhitang Lv, Yue Zhou, Fuchu He, Yao Zhang, Ping Xu (2018). Multiproteases Combined with High-pH Reverse-Phase Separation Strategy Verified Fourteen Missing Proteins in Human Testis Tissue. Journal of Proteome Research.DOI
Yangzhige He, Yan Wang, Boya Zhang, Yang Li, Lihong Diao, Lu Liang, Jing‐Wen Yao, Zhongyang Liu, Dong Li, Fuchu He (2018). Revealing the metabolic characteristics of human embryonic stem cells by genome‐scale metabolic modeling. FEBS Letters.DOI
Mehari Muuz Weldemariam, Chia‐Li Han, Faezeh Shekari, Reta Birhanu Kitata, Ching-Yu Chuang, Wei-Ting Hsu, Hung‐Chih Kuo, Wai-Kok Choong, Ting‐Yi Sung, Fuchu He, Maxey C. M. Chung, Ghasem Hosseini Salekdeh, Yu‐Ju Chen (2018). Subcellular Proteome Landscape of Human Embryonic Stem Cells Revealed Missing Membrane Proteins. Journal of Proteome Research.DOI
Xian Liu, Mingfei Han, Zhao Chen, Cheng Chang, Yunping Zhu, Chang‐Hui Ge, Rong‐Hua Yin, Yi‐Qun Zhan, Chang‐Yan Li, Miao Yu, Fuchu He, Xiaoming Yang (2018). KeggExp: a web server for visual integration of KEGG pathways and expression profile data. Bioinformatics.DOI
Juncheng Wei, Yanzhi Yuan, Lu Chen, Yuanming Xu, Yuehui Zhang, Yajun Wang, Yanjie Yang, Clara Bien Peek, Lauren P. Diebold, Yi Yang, Beixue Gao, Chaozhi Jin, Johanna Melo‐Cardenas, Navdeep S. Chandel, Donna D. Zhang, Hui Pan, Kezhong Zhang, Jian Wang, Fuchu He, Deyu Fang (2018). ER-associated ubiquitin ligase HRD1 programs liver metabolism by targeting multiple metabolic enzymes. Nature Communications.DOI
Yuanxiang Lao, Yanyan Li, Ping Zhang, Qianqian Shao, Weiran Lin, Bintao Qiu, Yongzhuang Lv, Lichun Tang, Shishuai Su, Hongyu Zhang, Chunyan Tian, Aihua Sun, Handong Wei, Pumin Zhang, Yan Fen Wu, Ying Jiang, Fuchu He (2018). Targeting Endothelial Erk1/2-Akt Axis as a Regeneration Strategy to Bypass Fibrosis during Chronic Liver Injury in Mice. Molecular Therapy.DOI
Yan Jiang, Yuanyuan Zhao, Fuchu He, Haijian Wang (2018). Artificial MicroRNA-Mediated Tgfbr2 and Pdgfrb Co-Silencing Ameliorates Carbon Tetrachloride–Induced Hepatic Fibrosis in Mice. Human Gene Therapy.DOI
Yuhan Chen, Qingyang Huang, Wen Liu, Qiong Zhu, Chun‐Ping Cui, Liang Xu, Xing Long Guo, Ping Wang, Jingwen Liu, Guanglong Dong, Wenyi Wei, Cui Hua Liu, Zhichun Feng, Fuchu He, Lingqiang Zhang (2018). Mutually exclusive acetylation and ubiquitylation of the splicing factor SRSF5 control tumor growth. Nature Communications.DOI
Liang Lu, Yang Li, Zhongyang Liu, Feng-Ji Liang, Feifei Guo, Shuai Yang, Dan Wang, Yangzhige He, J. Xiong, Dong Li, Fuchu He (2017). Functional constraints on adaptive evolution of protein ubiquitination sites. Scientific Reports.DOI
Peng Wu, Donghu Zhou, Weiran Lin, Yanyan Li, Handong Wei, Xiaohong Qian, Ying Jiang, Fuchu He (2017). Cell-type-resolved alternative splicing patterns in mouse liver. DNA Research.DOI
Yuanfeng Li, Yun Zhai, Qingfeng Song, Haitao Zhang, Pengbo Cao, Jie Ping, Xinyi Liu, Bingqian Guo, Guanjun Liu, Song Jin, Ying Zhang, Aiqing Yang, Hongbo Yan, Liang Yang, Ying Cui, Yilong Ma, Jinliang Xing, Xizhong Shen, Taotao Liu, Hongxin Zhang, Jiaze An, Jin‐Xin Bei, Wei‐Hua Jia, Longli Kang, Lijun Liu, Dongya Yuan, Zhibin Hu, Hongbing Shen, Lei Lü, Xuan Wang, Hua Li, Fuchu He, Hong‐Xing Zhang, Gangqiao Zhou (2017). Genome-Wide Association Study Identifies a New Locus at 7q21.13 Associated with Hepatitis B Virus–Related Hepatocellular Carcinoma. Clinical Cancer Research.DOI
Liangliang Ren, Zesong Li, Wenli Shao, Weiran Lin, Fuchu He, Ying Jiang (2017). TiO2 with Tandem Fractionation (TAFT): An Approach for Rapid, Deep, Reproducible, and High-Throughput Phosphoproteome Analysis. Journal of Proteome Research.DOI
Jian Zhang, Ning Hao, Wei Liu, Min Lu, Longqin Sun, Ning Chen, Miantao Wu, Xiaohang Zhao, Baocai Xing, Wei Sun, Fuchu He (2017). In-depth proteomic analysis of tissue interstitial fluid for hepatocellular carcinoma serum biomarker discovery. British Journal of Cancer.DOI
Yihao Wang, Yang Chen, Yao Zhang, Wei Wei, Yanchang Li, Tao Zhang, Fuchu He, Yue Gao, Ping Xu (2017). Multi-Protease Strategy Identifies Three PE2 Missing Proteins in Human Testis Tissue. Journal of Proteome Research.DOI
María I. Mora, Manuela Molina, Leticia Odriozola, Félix Elortza, José María Mato, Barbara Sitek, Pumin Zhang, Fuchu He, Maria Ujue Latasa, Matias Antonio Avila, Fernando José Corrales (2017). Prioritizing Popular Proteins in Liver Cancer: Remodelling One-Carbon Metabolism. Journal of Proteome Research.DOI
Xuehui Peng, Feng Xu, Shu Liu, Suzhen Li, Qingbo Huang, Lei Chang, Lei Wang, Xin Ma, Fuchu He, Ping Xu (2017). Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer. Journal of Proteome Research.DOI
Yang Li, Ping Xie, Lu Liang, Jian Wang, Lihong Diao, Zhongyang Liu, Feifei Guo, Yangzhige He, Yuan Liu, Qin Huang, Han Liang, Dong Li, Fuchu He (2017). An integrated bioinformatics platform for investigating the human E3 ubiquitin ligase-substrate interaction network. Nature Communications.DOI
Yaya Zhou, Wei Sun, Ning Chen, Xu Chen, Xinxin Wang, Kun Dong, Binxue Zhang, Jian Zhang, Ning Hao, Aihua Sun, Handong Wei, Fuchu He, Ying Jiang (2017). Discovery of NKCC1 as a potential therapeutic target to inhibit hepatocellular carcinoma cell growth and metastasis. Oncotarget.DOI
Zhiyu Bao, Lei Lü, Xinyi Liu, Bingqian Guo, Yun Zhai, Yuanfeng Li, Yahui Wang, Bobo Xie, Qian Ren, Pengbo Cao, Yuqing Han, Wei‐Hua Jia, Minshan Chen, Xin-qiang Liang, Xuan Wang, Yi‐Xin Zeng, Fuchu He, Hongxing Zhang, Ying Cui, Gangqiao Zhou (2017). Association between the functional polymorphism Ile31Phe in theAURKAgene and susceptibility of hepatocellular carcinoma in chronic hepatitis B virus carriers. Oncotarget.DOI
Yanxia Zhou, Pan Shen, Qiuyan Lan, Deng Chen, Yao Zhang, Yanchang Li, Wei Wei, Yihao Wang, Na Su, Fuchu He, Qiong Xie, Zhitang Lyu, Dong Cheol Yang, Ping Xu (2017). High‐coverage proteomics reveals methionine auxotrophy in Deinococcus radiodurans. PROTEOMICS.DOI
Ying Zhang, Yuanfeng Li, Miantao Wu, Pengbo Cao, Xiaomin Liu, Qian Ren, Yun Zhai, Bobo Xie, Yanling Hu, Zhibin Hu, Jin‐Xin Bei, Jie Ping, Xinyi Liu, Yinghua Yu, Bingqian Guo, Hui Lü, Guanjun Liu, Haitao Zhang, Haitao Zhang, Ying Cui, Zengnan Mo, Hongbing Shen, Yi-Xin Zeng, Fuchu He, Hongxing Zhang, Hongxing Zhang, Gangqiao Zhou (2017). Comprehensive assessment showed no associations of variants at the SLC10A1 locus with susceptibility to persistent HBV infection among Southern Chinese. Scientific Reports.DOI
Wenchuan Leng, Xiaotian Ni, Changqing Sun, Tianyuan Lu, Anna Malovannaya, Sung Yun Jung, Yin Huang, Yang Qiu, Guannan Sun, Matthew Valle Holt, Chen Ding, Wei Sun, Xue-Bo Men, Tieliu Shi, Weimin Zhu, Yi Wang, Fuchu He, Bei Zhen, Guangshun Wang, Jun Qin (2017). Proof-of-Concept Workflow for Establishing Reference Intervals of Human Urine Proteome for Monitoring Physiological and Pathological Changes. EBioMedicine.DOI
Hongyu Zhang, Fangyan Chen, Xu Fan, Cong Lin, Yunwei Hao, Handong Wei, Weiran Lin, Ying Jiang, Fuchu He (2017). Quantitative Proteomic analysis on Activated Hepatic Stellate Cells reversion Reveal STAT1 as a key regulator between Liver Fibrosis and recovery. Scientific Reports.DOI
Lili Cai, Jun Tu, Lei Song, Zhihua Gao, Kai Li, Yunzhi Wang, Yang Liu, Fan Zhong, Rui Ge, Jun Qin, Chen Ding, Fuchu He (2017). Proteome-wide Mapping of Endogenous SUMOylation Sites in Mouse Testis. Molecular & Cellular Proteomics.DOI
Yuhan Chen, Wen Liu, Yiwu Wang, Luo Zhang, Luo Zhang, Jun Wei, Xueli Zhang, Fuchu He, Lingqiang Zhang, Lingqiang Zhang (2017). Casein Kinase 2 Interacting Protein-1 regulates M1 and M2 inflammatory macrophage polarization. Cellular Signalling.DOI
Jing Zhao, Qiongzhu Dong, Fan Zhong, Lili Cai, Zhaoyu Qin, Yang Liu, Chengzhao� Lin, Lun–Xiu Qin, Fuchu He (2017). NMI promotes hepatocellular carcinoma progression via BDKRB2 and MAPK/ERK pathway. Oncotarget.DOI
Yuan Liu, Mengqi He, Dan Wang, Lihong Diao, Jinying Liu, Tang Li, Shuzhen Guo, Fuchu He, Dong Li (2017). HisgAtlas 1.0: a human immunosuppression gene database. Database.DOI
Dianyuan Zhao, Xintao Han, Xuexing Zheng, Hualei Wang, Zaopeng Yang, Di Liu, Ke Han, Jing Liu, Xiaowen Wang, Wenting Yang, Qingyang Dong, Songtao Yang, Xianzhu Xia, Li Tang, Fuchu He (2016). The Myeloid LSECtin Is a DAP12-Coupled Receptor That Is Crucial for Inflammatory Response Induced by Ebola Virus Glycoprotein. PLoS Pathogens.DOI
Wenhao Shi, Kai Li, Lei Song, Mingwei Liu, Yunzhi Wang, Wanlin Liu, Xia Xia, Zhaoyu Qin, Bei Zhen, Yi Wang, Fuchu He, Jun Qin, Chen Ding (2016). Transcription Factor Response Elements on Tip: A Sensitive Approach for Large-Scale Endogenous Transcription Factor Quantitative Identification. Analytical Chemistry.DOI
Di Liu, Cheng Chang, Ning Lü, Xing Wang, Qian Lu, Xiaojie Ren, Peng Ren, Dianyuan Zhao, Lijing Wang, Yunping Zhu, Fuchu He, Li Tang (2016). Comprehensive Proteomics Analysis Reveals Metabolic Reprogramming of Tumor-Associated Macrophages Stimulated by the Tumor Microenvironment. Journal of Proteome Research.DOI
Chen Ding, Yanyan Li, Feifei Guo, Ying Jiang, Wantao Ying, Dong Li, Dong Cheol Yang, Xia Xia, Wanlin Liu, Yan Zhao, Yangzhige He, Xianyu Li, Wei Sun, Qiongming Liu, Lei Song, Bei Zhen, Pumin Zhang, Xiaohong Qian, Jun Qin, Fuchu He (2016). A Cell-type-resolved Liver Proteome. Molecular & Cellular Proteomics.DOI
Wei Wei, Weijia Luo, Feilin Wu, Xuehui Peng, Yao Zhang, Manli Zhang, Yan Zhao, Na Su, Yingzi Qi, Lingsheng Chen, Yangjun Zhang, Bo Wen, Fuchu He, Ping Xu (2016). Deep Coverage Proteomics Identifies More Low-Abundance Missing Proteins in Human Testis Tissue with Q-Exactive HF Mass Spectrometer. Journal of Proteome Research.DOI
Mingzhi Zhao, Wei Wei, Long Cheng, Yao Zhang, Feilin Wu, Fuchu He, Ping Xu (2016). Searching Missing Proteins Based on the Optimization of Membrane Protein Enrichment and Digestion Process. Journal of Proteome Research.DOI
Hongxiu Yu, Fang Wang, Ling Lin, Weiqian Cao, Yinkun Liu, Lun–Xiu Qin, Haojie Lu, Fuchu He, Huali Shen, Pengyuan Yang (2016). Mapping and analyzing the human liver proteome: progress and potential. Expert Review of Proteomics.DOI
Qian Cui, Qi-Sheng Feng, Hao‐Yuan Mo, Jian Sun, Yun-Fei Xia, Hongxing Zhang, Jia Nee Foo, Yun‐Miao Guo, Li-Zhen Chen, Ming Li, Wensheng Liu, Miao Xu, Gangqiao Zhou, Fuchu He, Xueqing Yu, Wei-Hua Jia, Jianjun Liu, Yi-Xin Zeng, Jin‐Xin Bei (2016). An extended genome-wide association study identifies novel susceptibility loci for nasopharyngeal carcinoma. Human Molecular Genetics.DOI
Cheng Chang, Jiyang Zhang, Changming Xu, Yan Zhao, Jie Ma, Tao Chen, Fuchu He, Hongwei Xie, Yunping Zhu (2016). Quantitative and In-Depth Survey of the Isotopic Abundance Distribution Errors in Shotgun Proteomics. Analytical Chemistry.DOI
Philip L. Bailin, Heng Zhu, Yang Liu, Fuchu He, Ping Xie, Lingqiang Zhang (2016). Itch promotes the neddylation of JunB and regulates JunB-dependent transcription. Cellular Signalling.DOI
Wei Sun, Baocai Xing, Lihai Guo, Zhilei Liu, Jinsong Mu, Longqin Sun, Handong Wei, Xiaohang Zhao, Xiaohong Qian, Ying Jiang, Fuchu He (2016). Quantitative Proteomics Analysis of Tissue Interstitial Fluid for Identification of Novel Serum Candidate Diagnostic Marker for Hepatocellular Carcinoma. Scientific Reports.DOI
Juntao Yang, He Wang, Min Wang, Biao Liu, Hui Xu, Feng Xu, Dianyuan Zhao, Bin Hu, Na Zhao, Junyi Wang, Di Liu, Tang Li, Fuchu He (2016). Involvement of LSECtin in the hepatic natural killer cell response. Biochemical and Biophysical Research Communications.DOI
Xiao Qiu, Rongfei Wei, Yang Li, Qiong Zhu, Cong Xiong, Yuhan Chen, Yuan Zhang, Kefeng Lu, Fuchu He, Lingqiang Zhang (2016). NEDL2 regulates enteric nervous system and kidney development in its Nedd8 ligase activity-dependent manner. Oncotarget.DOI
Zhongyang Liu, Feifei Guo, Yong Wang, Chun Li, Xinlei Zhang, Honglei Li, Lihong Diao, Jiangyong Gu, Wei Wang, Dong Li, Fuchu He (2016). BATMAN-TCM: a Bioinformatics Analysis Tool for Molecular mechANism of Traditional Chinese Medicine. Scientific Reports.DOI
Jing Nie, Li Liu, Guichun Xing, Mimi Zhang, R Wei, Mingzhou Guo, Xiaolei Li, Ping Xie, Li Li, Fuchu He, Weidong Han, Lingqiang Zhang (2016). Erratum: CKIP-1 acts as a colonic tumor suppressor by repressing oncogenic Smurf1 synthesis and promoting Smurf1 autodegradation. Oncogene.DOI
Wenfeng Huang, Hongxing Zhang, Yumin Hao, Xiaobing Xu, Yun Zhai, Shaoxia Wang, Yang Li, Fuchao Ma, Yuanfeng Li, Zhifu Wang, Yang Zhang, Xiumei Zhang, Renxiang Liang, Zhongliang Wei, Ying Cui, Yongqiang Li, Xinsen Yu, Hongzan Ji, Fuchu He, Weimin Xie, Gangqiao Zhou (2016). A Non-Synonymous Single Nucleotide Polymorphism in the HJURP Gene Associated with Susceptibility to Hepatocellular Carcinoma among Chinese. PLoS ONE.DOI
Peter L. Horvatovich, Emma K. Lundberg, Yu‐Ju Chen, Ting-Yi Sung, Fuchu He, Edouard Collins Nice, Robert J. A. Goode, Simon Yu, Shoba Ranganathan, Mark S. Baker, Gilberto B. Domont, Erika Velásquez, Dong Li, Siqi Liu, Quanhui Wang, Qing‐Yu He, Rajasree Menon, Yuanfang Guan, Fernando José Corrales, Víctor Segura, José Ignacio Casal, Alberto Pascual-Montano, Juan Pablo Albar, Manuel Fuentes, María González‐González, Paula Díez, Nieves Ibarrola, Rosa Ma Dégano, Yassene Mohammed, Christoph H. Borchers, Andrea Urbani, Alessio Soggiù, Tadashi Yamamoto, Ghasem Hosseini Salekdeh, Alexander I. Archakov, Elena A. Ponomarenko, Andrey Lisitsa, Cheryl F. Lichti, Ekaterina Mostovenko, Roger A. Kroes, Melinda Rezeli, Ákos Végvári, Thomas E. Fehniger, Rainer Bischoff, Juan Antonio Vizcaíno, Eric W. Deutsch, Lydie Lane, Carol L. Nilsson, György Marko‐Varga, Gilbert S. Omenn, Seul-Ki Jeong, Jong-Sun Lim, Young‐Ki Paik, William S. Hancock (2015). Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project. Journal of Proteome Research.DOI
Yang Zhang, Xiao‐Ai Zhang, Hongxing Zhang, Hongxing Zhang, Yun Zhai, Zhifu Wang, Peiyao Li, Lixia Yu, Xia Xia, Ying Zhang, Ying Zhang, Yixin Zeng, Fuchu He, Gangqiao Zhou (2015). Common variations in TERT-CLPTM1L locus are reproducibly associated with the risk of nasopharyngeal carcinoma in Chinese populations. Oncotarget.DOI
Yan Zhao, Cheng Chang, Peibin Qin, Qichen Cao, Tian Fang, Jing Jiang, Xianyu Li, Wenfeng Yu, Yunping Zhu, Fuchu He, Wantao Ying, Xiaohong Qian (2015). Mining the human plasma proteome with three-dimensional strategies by high-resolution Quadrupole Orbitrap Mass Spectrometry. Analytica Chimica Acta.DOI
Peiyao Li, Jinfeng Meng, Yun Zhai, Hongxing Zhang, Lixia Yu, Zhifu Wang, Xiao‐Ai Zhang, Pengbo Cao, Xi Chen, Yuqing Han, Yang Zhang, Huipeng Chen, Yan Ling, Yuxia Li, Ying Cui, Jin‐Xin Bei, Yi-Xin Zeng, Fuchu He, Gangqiao Zhou (2015). Argonaute 2 and nasopharyngeal carcinoma: a genetic association study and functional analysis. BMC Cancer.DOI
Aishi Xu, Guang Li, Dong Cheol Yang, Songfeng Wu, Hongsheng Ouyang, Ping Xu, Fuchu He (2015). Evolutionary Characteristics of Missing Proteins: Insights into the Evolution of Human Chromosomes Related to Missing-Protein-Encoding Genes. Journal of Proteome Research.DOI
Yao Zhang, Qidan Li, Feilin Wu, Ruo Zhou, Yingzi Qi, Na Su, Lingsheng Chen, Shaohang Xu, Tao Jiang, Chengpu Zhang, Gang Cheng, Xinguo Chen, Degang Kong, Yujia Wang, Tao Zhang, Jin Zi, Wei Wei, Yuan Gao, Bei Zhen, Zhi Xiong, Songfeng Wu, Pengyuan Yang, Quanhui Wang, Bo Wen, Fuchu He, Ping Xu, Siqi Liu (2015). Tissue-Based Proteogenomics Reveals that Human Testis Endows Plentiful Missing Proteins. Journal of Proteome Research.DOI
Lin Yuan, Yanrong Lv, Hongchang Li, Haidong Gao, Shanshan Song, Yuan Zhang, Guichun Xing, Xiangzhen Kong, Lijing Wang, Yang Li, Tao Zhou, Daming Gao, Zhi‐Xiong Jim Xiao, Yuxin Yin, Wenyi Wei, Fuchu He, Lingqiang Zhang (2015). Deubiquitylase OTUD3 regulates PTEN stability and suppresses tumorigenesis. Nature Cell Biology.DOI
Na Su, Chengpu Zhang, Yao Zhang, Zhiqiang Wang, Fengxu Fan, Mingzhi Zhao, Feilin Wu, Yuan Gao, Yanchang Li, Lingsheng Chen, Miaomiao Tian, Tao Zhang, Bo Wen, Na Sensang, Zhi Xiong, Songfeng Wu, Siqi Liu, Pengyuan Yang, Bei Zhen, Yunping Zhu, Fuchu He, Ping Xu (2015). Special Enrichment Strategies Greatly Increase the Efficiency of Missing Proteins Identification from Regular Proteome Samples. Journal of Proteome Research.DOI
Hao Guo, Jiaqiang Dong, Sijung Hu, Xiqiang Cai, Guangbo Tang, Jianhua Dou, Miaomiao Tian, Fuchu He, Yongzhan Nie, Daiming Fan (2015). Biased random walk model for the prioritization of drug resistance associated proteins. Scientific Reports.DOI
Yigang Tong, Weifeng Shi, Di Liu, Jun Qian, Long Liang, Xiaochen Bo, Jun Liu, Hongguang Ren, Hang Fan, Ming Ni, Yang Sun, Yuan Jin, Yue Teng, Zhen Li, David Kargbo, Foday Mohamed Dafae, Alex Kanu, Chengchao Chen, Zhi-Heng Lan, Hui Jiang, Yang Luo, Huijun Lu, Xiao-Guang Zhang, Fan Yang, Yi Hu, Yuxi Cao, Yong‐Qiang Deng, Haoxiang Su, Yu Sun, Wensen Liu, Zhuang Wang, Cheng-Yu Wang, Zhao-Yang Bu, Zhen-Dong Guo, Liubo Zhang, Weimin Nie, Changqing Bai, Chun-Hua Sun, Xiaoping An, Peisong Xu, Xianglilan Zhang, Yong Huang, Zhiqiang Mi, Dong Su Yu, Hongwu Yao, Yong Feng, Zhi-Ping Xia, Xuexing Zheng, Songtao Yang, Bing Lu, Jia-Fu Jiang, Brima Kargbo, Fuchu He, George F. Gao, Wu‐Chun Cao, Yigang Tong, Jun Qian, Yang Sun, Huijun Lu, Xiao-Guang Zhang, Fan Yang, Yi Hu, Yuxi Cao, Yong‐Qiang Deng, Haoxiang Su, Yu Sun, Wensen Liu, Zhuang Wang, Chengyu Wang, Zhao-Yang Bu, Zhen-Dong Guo, Liubo Zhang, Weimin Nie, Changqing Bai, Chun-Hua Sun, Yong Feng, Jia-Fu Jiang, George Fu Gao (2015). Genetic diversity and evolutionary dynamics of Ebola virus in Sierra Leone. Nature.DOI
Jun Tu, Yalan Chen, Lili Cai, Changming Xu, Yang Zhang, Yanmei Chen, Chen Zhang, Jian Zhao, Jinke Cheng, Hongwei Xie, Fan Zhong, Fuchu He (2015). Functional Proteomics Study Reveals SUMOylation of TFII-I is Involved in Liver Cancer Cell Proliferation. Journal of Proteome Research.DOI
Xinyi Tu, Wai Po Chong, Yun Zhai, Hongxing Zhang, Fang Zhang, Shixin Wang, Wei Yong Liu, Maoti Wei, Nora Ho On Siu, Hao Yang, Wanling Yang, Wu‐Chun Cao, YL Lau, Fuchu He, Gangqiao Zhou (2015). Functional polymorphisms of the CCL2 and MBL genes cumulatively increase susceptibility to severe acute respiratory syndrome coronavirus infection. Journal of Infection.DOI
Wei Sun, Zubi Liu, Lei Guo, Baocai Xing, Juwei Mu, Longqin Sun, H. Wei, Xiaohang Zhao, Xia Qian, Ying Jiang, Fuchu He (2015). P0240 : Proteomic analysis of tissue interstitial fluid for identification of novel serum candidate diagnostic marker for hepatocellular carcinoma. Journal of Hepatology.DOI
Shuai Yang, Xinlei Zhang, Lihong Diao, Feifei Guo, Dan Wang, Zhongyang Liu, Honglei Li, Junjie Zheng, Jingshan Pan, Edouard Collins Nice, Dong Li, Fuchu He (2015). CAPER 3.0: A Scalable Cloud-Based System for Data-Intensive Analysis of Chromosome-Centric Human Proteome Project Data Sets. Journal of Proteome Research.DOI
Shan Wang, Siying Wang, Lihua Yang, Hua Guo, Xue Kong, Lin Yuan, Guichun Xing, Fuchu He, Lingqiang Zhang (2015). ARF-mediated SUMOylation of Apak antagonizes ubiquitylation and promotes its nucleolar accumulation to inhibit 47S pre-rRNA synthesis. Journal of Molecular Cell Biology.DOI
Chan Xiang, Jiucun Wang, Xiaochen Kou, Xiabin Chen, Zhaoyu Qin, Yan Jiang, Chang Sun, Jibin Xu, Wen Tan, Jin Li, Dongxin Lin, Fuchu He, Haijian Wang (2015). Pulmonary expression of CYP2A13 and ABCB1 is regulated by FOXA2, and their genetic interaction is associated with lung cancer. The FASEB Journal.DOI
Huali Shen, Fan Zhong, Yang Zhang, Hongxiu Yu, Yinkun Liu, Lun–Xiu Qin, Fuchu He, Zhao–You Tang, Pengyuan Yang (2015). Transcriptome and proteome of human hepatocellular carcinoma reveal shared metastatic pathways with significant genes. PROTEOMICS.DOI
Zhongyang Liu, Feifei Guo, Jiangyong Gu, Yong Wang, Yang Li, Dan Wang, Lu Liang, Dong Li, Fuchu He (2015). Similarity-based prediction for Anatomical Therapeutic Chemical classification of drugs by integrating multiple data sources. Bioinformatics.DOI
Yan Jiang, Sheng Wang, Yuanyuan Zhao, Chengzhao� Lin, Fan Zhong, Jin Li, Fuchu He, Haijian Wang (2015). Histone H3K9 demethylase JMJD1A modulates hepatic stellate cells activation and liver fibrosis by epigenetically regulating peroxisome proliferator‐activated receptor γ. The FASEB Journal.DOI
Hailin Tang, Fan Zhong, Wei Liu, Fuchu He, Hongwei Xie (2015). PathPPI: an integrated dataset of human pathways and protein-protein interactions. Science China Life Sciences.DOI
Rongfei Wei, Lingqiang Zhang, Fuchu He, Xiao Qiu (2015). The roles of signaling pathways in regulating kidney development. PubMed.DOI
Pengyuan Yang, Ping Xu, Siqi Liu, Qingyu He, Fuchu He (2014). Exploration of human chromosomes by biomass spectrometry based proteomics with trans-omics. 《中国化学会首届全国质谱分析学术研讨会会议论文集》.
Ning Li, Zhongwei Xu, Linhui Zhai, YanChang Li, Fengxu Fan, Junjie Zheng, Ping Xu, Fuchu He (2014). Rapid development of proteomics in China: from the perspective of the Human Liver Proteome Project and technology development. Science China Life Sciences.DOI
Feng Xu, Jing Liu, Di Liu, Biao Liu, Min Wang, Zhiyuan Hu, Xuemei Du, Tang Li, Fuchu He (2014). LSECtin Expressed on Melanoma Cells Promotes Tumor Progression by Inhibiting Antitumor T-cell Responses. Cancer Research.DOI
Rongfei Wei, Xiao Qiu, Shaoxia Wang, Yang Li, Yiwu Wang, Kefeng Lu, Yesheng Fu, Guichun Xing, Fuchu He, Lingqiang Zhang (2014). NEDL2 is an essential regulator of enteric neural development and GDNF/Ret signaling. Cellular Signalling.DOI
Lin Yuan, Zhongbin Chen, Shanshan Song, Shan Wang, Chunyan Tian, Guichun Xing, Xiaojuan Chen, Zhi‐Xiong Jim Xiao, Fuchu He, Lingqiang Zhang (2014). p53 Degradation by a Coronavirus Papain-like Protease Suppresses Type I Interferon Signaling. Journal of Biological Chemistry.DOI
Yanzhi Yuan, Chunyan Tian, Qiaoling Gong, Limin Shang, Yuehui Zhang, Chaozhi Jin, Fuchu He, Jian Wang (2014). Interactome Map Reveals Phospholipid Scramblase 1 as a Novel Regulator of Hepatitis B Virus X Protein. Journal of Proteome Research.DOI
Ranran Cheng, Peng Kang Jin, Yonghong Yan, Peili Cao, Jiewei Wang, Chen Qiu, Lichun Tang, Di Liu, Li Tang, Jianping Jin, Xingxu Huang, Fuchu He, Pumin Zhang (2014). Efficient gene editing in adult mouse livers via adenoviral delivery of CRISPR/Cas9. FEBS Letters.DOI
Dahu Li, Heng Zhu, Chao Liang, Wenbo Li, Guichun Xing, Lanzhi Ma, Lujing Ding, Yi Zhang, Fuchu He, Lingqiang Zhang (2014). CKIP-1 suppresses the adipogenesis of mesenchymal stem cells by enhancing HDAC1-associated repression of C/EBPα. Journal of Molecular Cell Biology.DOI
Hongyu Zhang, Peng Wu, Fangyan Chen, Yunwei Hao, Yuanxiang Lao, Liangliang Ren, Longqin Sun, Wei Sun, Handong Wei, Daniel W. Chan, Ying Jiang, Fuchu He (2014). SILAC‐based quantitative proteomic analysis of secretome between activated and reverted hepatic stellate cells. PROTEOMICS.DOI
Juncheng Wei, Chao Wei, Min Wang, Qiu Xiao, Yang Li, Yanzhi Yuan, Chaozhi Jin, Ling Leng, Jian Wang, Xiaoming Yang, Fuchu He (2014). The GTPase-activating protein GIT2 protects against colitis by negatively regulating Toll-like receptor signaling. Proceedings of the National Academy of Sciences.DOI
Sheng Wang, Yan Jiang, Jin Liu, Yuanyuan Zhao, Chan Xiang, Rong Ma, Haidong Gao, Jin Li, Fuchu He, Haijian Wang (2014). Revisiting the role of MCL1 in tumorigenesis of solid cancer: gene expression correlates with antiproliferative phenotype in breast cancer cells and its functional regulatory variants are associated with reduced cancer susceptibility. Tumor Biology.DOI
Boqin Qiang, Fuchu He, Yi-Xin Zeng (2013). Forum on frontiers of science and technology: Lifeomics and translational medicine. Science China Life Sciences.DOI
Cheng Chang, Jiyang Zhang, Mingfei Han, Jie Ma, Wei Zhang, Songfeng Wu, Kehui Liu, Hongwei Xie, Fuchu He, Yunping Zhu (2013). SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods. Bioinformatics.DOI
Peiyao Li, Hongbo Yan, Hong‐Xing Zhang, Lixia Yu, Zhifu Wang, Yun Zhai, Xia Xia, Jiye Zhang, Yang Zhang, Fuchao Ma, Wenfeng Huang, Mi Cai, Ying Cui, Fuchu He, Gangqiao Zhou (2013). A Functional Polymorphism in MIR196A2 Is Associated with Risk and Progression of Nasopharyngeal Carcinoma in the Chinese Population. Genetic Testing and Molecular Biomarkers.DOI
Dan Wang, Zhongyang Liu, Feifei Guo, Lihong Diao, Yang Li, Xinlei Zhang, Zechi Huang, Dong Li, Fuchu He (2013). CAPER 2.0: An Interactive, Configurable, and Extensible Workflow-Based Platform to Analyze Data Sets from the Chromosome-centric Human Proteome Project. Journal of Proteome Research.DOI
Cheng Chang, Liwei Li, Chengpu Zhang, Songfeng Wu, Kun Guo, Jin Zi, Zhipeng Chen, Jing Jiang, Jie Ma, Qing Yu, Fengxu Fan, Peibin Qin, Mingfei Han, Na Su, Tao Chen, Kang Wang, Linhui Zhai, Tao Zhang, Wantao Ying, Zhongwei Xu, Yang Zhang, Yinkun Liu, Xiaohui Liu, Fan Zhong, Huali Shen, Quanhui Wang, Guixue Hou, Haiyi Zhao, Guilin Li, Siqi Liu, Wei Jie Gu, Guibin Wang, Tong Wang, Gong Zhang, Xiaohong Qian, Ning Li, Qing‐Yu He, Liang Lin, Pengyuan Yang, Yunping Zhu, Fuchu He, Ping Xu (2013). Systematic Analyses of the Transcriptome, Translatome, and Proteome Provide a Global View and Potential Strategy for the C-HPP. Journal of Proteome Research.DOI
Chengpu Zhang, Ning Li, Linhui Zhai, Shaohang Xu, Xiaohui Liu, Yizhi Cui, Jie Ma, Mingfei Han, Jing Jiang, Chunyuan Yang, Fengxu Fan, Liwei Li, Peibin Qin, Qing Yu, Cheng Chang, Na Su, Junjie Zheng, Tao Zhang, Bo Wen, Ruo Zhou, Liang Lin, Zhilong Lin, Baojin Zhou, Yang Zhang, Guoquan Yan, Yinkun Liu, Pengyuan Yang, Kun Guo, Wei Jie Gu, Yang Chen, Gong Zhang, Qing‐Yu He, Songfeng Wu, Tong Wang, Huali Shen, Quanhui Wang, Yunping Zhu, Fuchu He, Ping Xu (2013). Systematic Analysis of Missing Proteins Provides Clues to Help Define All of the Protein-Coding Genes on Human Chromosome 1. Journal of Proteome Research.DOI
Baosheng Guo, Bao‐Ting Zhang, Lizhen Zheng, Tao Tang, Jin Liu, Heng Wu, Zhijun Yang, Songlin Peng, Xiaojuan He, Hongqi Zhang, Kevin K.M. Yue, Fuchu He, Lingqiang Zhang, Ling Qin, Zhaoxiang Bian, Weihong Tan, Zicai Liang, Aiping Lü, Ge Zhang (2013). Therapeutic RNA interference targeting CKIP-1 with a cross-species sequence to stimulate bone formation. Bone.DOI
Li Lu, Shaohua Hu, Rongfei Wei, Xiao Qiu, Kefeng Lu, Yesheng Fu, Hongchang Li, Guichun Xing, Dong Li, Ruiyun Peng, Fuchu He, Lingqiang Zhang (2013). The HECT Type Ubiquitin Ligase NEDL2 Is Degraded by Anaphase-promoting Complex/Cyclosome (APC/C)-Cdh1, and Its Tight Regulation Maintains the Metaphase to Anaphase Transition. Journal of Biological Chemistry.DOI
Lu Liang, Dong Li, Fuchu He (2013). Bioinformatics advances in protein ubiquitination. Hereditas (Beijing).DOI
Jing Nie, Li Liu, Guichun Xing, Mimi Zhang, R Wei, Mingzhou Guo, Xiaolei Li, Ping Xie, Li Li, Fuchu He, Weidong Han, Lingqiang Zhang (2013). CKIP-1 acts as a colonic tumor suppressor by repressing oncogenic Smurf1 synthesis and promoting Smurf1 autodegradation. Oncogene.DOI
Ling Leng, Changming Xu, Chao Wei, Jiyang Zhang, Boya Liu, Jie Ma, Ning Li, Weijie Qin, Wanjun Zhang, Chengpu Zhang, Xiaohua Xing, Linhui Zhai, Fan Yang, Mansheng Li, Chaozhi Jin, Yanzhi Yuan, Ping Xu, Jun Qin, Hongwei Xie, Fuchu He, Jian Wang (2013). A Proteomics Strategy for the Identification of FAT10-Modified Sites by Mass Spectrometry. Journal of Proteome Research.DOI
Luo Zhang, Xia Xia, Minghua Zhang, Yiwu Wang, Guichun Xing, Xiushan Yin, Lei Song, Fuchu He, Lingqiang Zhang (2013). Integrated analysis of genomics and proteomics reveals that CKIP-1 is a novel macrophage migration regulator. Biochemical and Biophysical Research Communications.DOI
Jie Ma, Wenbo Li, Yongzhuang Lv, Cheng Chang, Songfeng Wu, Lei Song, Chen Ding, Handong Wei, Fuchu He, Ying Jiang, Yunping Zhu (2013). A new insight into the impact of different proteases on SILAC quantitative proteome of the mouse liver. PROTEOMICS.DOI
Chen Ding, Jing Jiang, Junying Wei, Wanlin Liu, Wei Zhang, Mingwei Liu, Tianyi Fu, Tianyuan Lu, Lei Song, Wantao Ying, Cheng Chang, Yangjun Zhang, Jie Ma, Lai Wei, Anna Malovannaya, Lijun Jia, Bei Zhen, Yibin Wang, Fuchu He, Xiaohong Qian, Jun Qin (2013). A Fast Workflow for Identification and Quantification of Proteomes. Molecular & Cellular Proteomics.DOI
Yanqiong Zhang, Chunyuan Yang, Shaochuang Wang, Тао Чен, Mansheng Li, Xue Bing Wang, Dongsheng Li, Kang Wang, Jie Ma, Songfeng Wu, Xueli Zhang, Yunping Zhu, Jinsheng Wu, Fuchu He (2013). LiverAtlas: a unique integrated knowledge database for systems‐level research of liver and hepatic disease. Liver International.DOI
Chao Liang, Xueli Zhang, Shanshan Song, Chunyan Tian, Yuxin Yin, Guichun Xing, Fuchu He, Lingqiang Zhang (2013). Identification of UHRF1/2 as new N-methylpurine DNA glycosylase-interacting proteins. Biochemical and Biophysical Research Communications.DOI
Biao Liu, Min Wang, Xiaowen Wang, Dianyuan Zhao, Di Liu, Jing Liu, Pei‐Jer Chen, Dongliang Yang, Fuchu He, Li Tang (2013). Liver Sinusoidal Endothelial Cell Lectin Inhibits CTL-Dependent Virus Clearance in Mouse Models of Viral Hepatitis. The Journal of Immunology.DOI
Fuchu He (2013). Lifeomics leads the age of grand discoveries. Science China Life Sciences.DOI
Wei Liu, Dong Li, Yunping Zhu, Hongwei Xie, Fuchu He (2013). Reconstruction of Signaling Network from Protein Interactions Based on Function Annotations. IEEE Transactions on Computational Biology and Bioinformatics.DOI
Zhongyang Liu, Feifei Guo, Jiyang Zhang, Jian Wang, Lu Liang, Dong Li, Fuchu He (2013). Proteome-wide Prediction of Self-interacting Proteins Based on Multiple Properties. Molecular & Cellular Proteomics.DOI
Dong Cheol Yang, Zhan-Fu Ma, Weiran Lin, Juntao Yang, Chunyan Tian, Handong Wei, Ying Jiang, Fuchu He (2013). Identification of KAP-1-associated complexes negatively regulating the Ey and β-major globin genes in the β-globin locus. Journal of Proteomics.DOI
杨冬，Dingchen Li，Fan Zhong，Dong Li，Ying Jiang，Fuchu He (2012). General trends of protein expression and localization reveal the rule of bio-complexity realization. 《第五届全国生物信息学与系统生物学学术大会暨国际生物信息学前沿研讨会高通量时代的生物信息学与系统生物学》.
Shanshan Song, Guichun Xing, Lin Yuan, Jian Wang, Shan Wang, Yuxin Yin, Chunyan Tian, Fuchu He, Lingqiang Zhang (2012). N-methylpurine DNA glycosylase inhibits p53-mediated cell cycle arrest and coordinates with p53 to determine sensitivity to alkylating agents. Cell Research.DOI
Yunfei Zuo, Shuangyi Ren, Min Wang, Biao Liu, Juntao Yang, Xuezhang Kuai, Changwei Lin, Dianyuan Zhao, Tang Li, Fuchu He (2012). Novel roles of liver sinusoidal endothelial cell lectin in colon carcinoma cell adhesion, migration and in-vivo metastasis to the liver. Gut.DOI
Wei Liu, Fuchu He, Ying Jiang (2012). Network-based discovery of gene signature for vascular invasion prediction in HCC. Journal of Hepatology.DOI
Feifei Guo, Dan Wang, Zhongyang Liu, Lu Liang, Wei Zhang, Haiyan Sun, Hongxing Zhang, Jie Ma, Songfeng Wu, Ning Li, Ying Jiang, Weimin Zhu, Jun Qin, Ping Xu, Dong Li, Fuchu He (2012). CAPER: a Chromosome-Assembled human Proteome browsER. Journal of Proteome Research.DOI
Songfeng Wu, Ning Li, Jie Ma, Huali Shen, Dahai Jiang, Cheng Chang, Chengpu Zhang, Liwei Li, Hongxing Zhang, Jing Jiang, Zhongwei Xu, Lingyan Ping, Tao Chen, Wei Zhang, Tao Zhang, Xiaohua Xing, Tailong Yi, Yanchang Li, Fengxu Fan, Xiaoqian Li, Fan Zhong, Quanhui Wang, Yang Zhang, Bo Wen, Guoquan Yan, Liang Lin, Jun Yao, Zhilong Lin, Feifei Wu, Liqi Xie, Hongxiu Yu, Mingqi Liu, Haojie Lu, Hong Mu, Dong Li, Weimin Zhu, Bei Zhen, Xiaohong Qian, Jun Qin, Siqi Liu, Pengyuan Yang, Yunping Zhu, Ping Xu, Fuchu He (2012). First Proteomic Exploration of Protein-Encoding Genes on Chromosome 1 in Human Liver, Stomach, and Colon. Journal of Proteome Research.DOI
Yang Zhang, Guoquan Yan, Linhui Zhai, Shaohang Xu, Huali Shen, Jun Yao, Feifei Wu, Liqi Xie, Hailin Tang, Hongxiu Yu, Mingqi Liu, Pengyuan Yang, Ping Xu, Chengpu Zhang, Liwei Li, Cheng Chang, Ning Li, Songfeng Wu, Yunping Zhu, Quanhui Wang, Bo Wen, Liang Lin, Yinzhu Wang, Guiyan Zheng, Lanping Zhou, Haojie Lu, Siqi Liu, Fuchu He, Fan Zhong (2012). Proteome Atlas of Human Chromosome 8 and Its Multiple 8p Deficiencies in Tumorigenesis of the Stomach, Colon, and Liver. Journal of Proteome Research.DOI
Xiaogang Wang, Baosheng Guo, Qi Li, Jiang Peng, Zhijun Yang, Yu Wang, Dong Li, Zhibo Hou, Ke Lv, Guanghan Kan, Hongqing Cao, Heng Wu, Jinping Song, Xiaohua Pan, Qiao Sun, Shukuan Ling, Yuheng Li, Yuheng Li, Mu Zhu, Pengfei Zhang, Songlin Peng, Xiaoqing Xie, Tao Tang, An Hong, Zhaoxiang Bian, Yanqiang Bai, Yinghui Li, Yinghui Li, Yinghui Li, Fuchu He, Ge Zhang, Yingxian Li, Yingxian Li (2012). miR-214 targets ATF4 to inhibit bone formation. Nature Medicine.DOI
Aniel Sánchez, Wei Sun, Jie Ma, Lazaro Hiram Betancourt, Yasset Pérez‐Riverol, Jorge Fernández-de-Cossío, Gabrìel Padrón, Ying Jiang, Fuchu He, Luis Javier González, Vladimir Besada (2012). Selective Isolation of Multiply Charged Peptides: A Confident Strategy for Protein Identification Using a Linear Trap Quadrupole Mass Spectrometer. European Journal of Mass Spectrometry.DOI
Zhifu Wang, Kai Feng, Maoxing Yue, Xiaoguang Lu, Qi-han Zheng, Hongxing Zhang, Yun Zhai, Peiyao Li, Lixia Yu, Mi Cai, Xiumei Zhang, Xin Kang, Weihai Shi, Xia Xia, Xi Chen, Pengbo Cao, Yuanfeng Li, Huipeng Chen, Yan Ling, Yu‐xia Li, Fuchu He, Gangqiao Zhou (2012). A non-synonymous SNP in the NOS2 associated with septic shock in patients with sepsis in Chinese populations. Human Genetics.DOI
Juncheng Wei, Yanzhi Yuan, Chaozhi Jin, Hui Chen, Ling Leng, Fuchu He, Jian Wang (2012). The Ubiquitin Ligase TRAF6 Negatively Regulates the JAK-STAT Signaling Pathway by Binding to STAT3 and Mediating Its Ubiquitination. PLoS ONE.DOI
Shukuan Ling, Qiao Sun, Yuheng Li, Luo Zhang, Pengfei Zhang, Xiaogang Wang, Chunyan Tian, Qi Li, Jinping Song, Hongju Liu, Guanghan Kan, Hongqing Cao, Zeng-ming Huang, Jielin Nie, Yanqiang Bai, Shanguang Chen, Yinghui Li, Fuchu He, Lingqiang Zhang, Yingxian Li (2012). CKIP-1 Inhibits Cardiac Hypertrophy by Regulating Class II Histone Deacetylase Phosphorylation Through Recruiting PP2A. Circulation.DOI
LingQiang ZHANG, Fuchu He, Luo ZHANG, YiWu WANG（2012）. 巨噬细胞极性及调控机制. Chinese Science Bulletin (Chinese Version).DOI
Haiying Liu, Yanzhi Yuan, Hongyan Guo, Keith Richard Mitchelson, Ke Zhang, Lan Xie, Wenyan Qin, Ying Lu, Jian Wang, Yong Sheng Guo, Yuxiang Zhou, Fuchu He (2012). Hepatitis B Virus Encoded X Protein Suppresses Apoptosis by Inhibition of the Caspase-Independent Pathway. Journal of Proteome Research.DOI
Hao Guo, Yunping Zhu, Dong Li, Fuchu He, Qijun Liu (2012). Using NMFAS to identify key biological pathways associated with human diseases. IEEE International Conference on Systems Biology.DOI
Jing Nie, Lin Liu, Fuchu He, Xiaobing Fu, Weidong Han, Lingqiang Zhang (2012). CKIP-1: A scaffold protein and potential therapeutic target integrating multiple signaling pathways and physiological functions. Ageing Research Reviews.DOI
Dianyuan Zhao, Mengyao Zhang, Min Wang, Biao Liu, Xiaowen Wang, Juntao Yang, Fuchu He, Li Tang (2012). Up-regulation of Cbl-b is associated with LSECtin-mediated inhibition of different CD4+ T-cell subsets. Immunobiology.DOI
Hongxiu Yu, Jian Zhao, Ling Lin, Yang Zhang, Fan Zhong, Yinkun Liu, Yanyan Yu, Huali Shen, Meimei Han, Fuchu He, Pengyuan Yang (2012). Proteomic study explores AGR2 as pro-metastatic protein in HCC. Molecular BioSystems.DOI
Ning Li, Songfeng Wu, Chengpu Zhang, Cheng Chang, Jiyang Zhang, Jie Ma, Liwei Li, Xiaohong Qian, Ping Xu, Yunping Zhu, Fuchu He (2012). P ep D istiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics. PROTEOMICS.DOI
Dahu Li, Chao Liang, Liang Xu, Chunyan Tian, Guichun Xing, Fuchu He, Lingqiang Zhang (2012). Murine calvaria-derived progenitor cells express high levels of osterix and lose their adipogenic capacity. Biochemical and Biophysical Research Communications.DOI
Fan Zhong, Dong Cheol Yang, Yunwei Hao, Chengzhao� Lin, Ying Jiang, Wantao Ying, Songfeng Wu, Yunping Zhu, Siqi Liu, Pengyuan Yang, Xiaohong Qian, Fuchu He (2012). Regular Patterns for Proteome-Wide Distribution of Protein Abundance across Species. PLoS ONE.DOI
Chan Xiang, Haidong Gao, Lei Meng, Zhaoyu Qin, Rong Ma, Yang Liu, Yan Jiang, Chengxue Dang, Jin Li, Fuchu He, Haijian Wang (2012). Functional variable number of tandem repeats variation in the promoter of proto‐oncogene PTTG1IP is associated with risk of estrogen receptor‐positive breast cancer. Cancer Science.DOI
Lin Yuan, Chunyan Tian, Hongye Wang, Shanshan Song, Deyang Li, Guichun Xing, Yuxin Yin, Fuchu He, Lingqiang Zhang (2012). Apak competes with p53 for direct binding to intron 1 of p53AIP1 to regulate apoptosis. EMBO Reports.DOI
Ge Zhang, Baosheng Guo, Heng Wu, Tao Tang, Bao‐Ting Zhang, Lizhen Zheng, Yixin He, Zhijun Yang, Xiaohua Pan, H. Lee Chow, Kinwah To, Yaping Li, Dahu Li, Xinluan Wang, Yì Xiáng J. Wáng, Kwong‐Man Lee, Zhibo Hou, Nan Dong, Gang Li, Kwok‐Sui Leung, Leung‐Kim Hung, Fuchu He, Lingqiang Zhang, Ling Qin (2012). A delivery system targeting bone formation surfaces to facilitate RNAi-based anabolic therapy. Nature Medicine.DOI
Yong Wang, Zhongyang Liu, Chun Li, Dong Li, Yulin Ouyang, Junda Yu, Shuzhen Guo, Fuchu He, Wei Wang (2012). Drug Target Prediction Based on the Herbs Components: The Study on the Multitargets Pharmacological Mechanism of Qishenkeli Acting on the Coronary Heart Disease. Evidence-based Complementary and Alternative Medicine.DOI
Kun Wang, Yuhang Wan, Zheng Zheng, Fuchu He, Zhiyuan Hu, Jinsong Zhu (2011). A novel refractive index detection method in voltage scanning surface plasmon resonance system. Sensors and Actuators B Chemical.DOI
Félix Elortza, Laura Beretta, Xueli Zhang, Fuchu He, José María Mato (2011). The 2011 Human Liver Proteome Project (HLPP) Workshop September 5, 2011, Geneva, Switzerland. PROTEOMICS.DOI
Yanqiong Zhang, Shaochuang Wang, Dong Li, Jiyang Zhnag, Dianhua Gu, Yunping Zhu, Fuchu He (2011). A Systems Biology-Based Classifier for Hepatocellular Carcinoma Diagnosis. PLoS ONE.DOI
He Fuchu (2011). Histone methyltransferase SETD2 in regulation of P53-mediated apoptosis. Junshi yixue.
Fengwei Tan, Ying Jiang, Nan Sun, Zhaoli Chen, Yongzhuang Lv, Kang Shao, Ning Li, Bin Qiu, Yibo Gao, Baozhong Li, Xiaogang Tan, Fang Zhou, Zhen Wang, Dapeng Ding, Jiwen Wang, Jian Sun, Jie Hang, Susheng Shi, Xiaoli Feng, Fuchu He, Jie He (2011). Identification of Isocitrate Dehydrogenase 1 as a Potential Diagnostic and Prognostic Biomarker for Non-small Cell Lung Cancer by Proteomic Analysis. Molecular & Cellular Proteomics.DOI
Yanqiong Zhang, Yunping Zhu, Fuchu He (2011). An overview of human protein databases and their application to functional proteomics in health and disease. Science China Life Sciences.DOI
Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wang‐Xiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Ya‐Ping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Ru Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang (2011). Toward an understanding of the protein interaction network of the human liver. Molecular Systems Biology.DOI
Jing Nie, Lin Liu, Xiaohang Zhao, Ping Xie, Ping‐Kun Zhou, Guichun Xing, Xiangjun Liu, Fuchu He, Weidong Han, LingQiang Zhang (2011). DNA damage stress induces the dissociation of Smurf1/2 from MDM2 in a slow manner. Chinese Science Bulletin.DOI
Xueli Zhang, Fuchu He (2011). A sketch of proteomics: Mapping the proteins of the liver. The Biochemist.DOI
Yang Zhang, Hongxing Zhang, Yun Zhai, Zhifu Wang, Fuchao Ma, Hongxue Wang, Peiyao Li, Ying Zhang, Lixia Yu, Ying Cui, Fuchu He, Gangqiao Zhou (2011). A functional tandem-repeats polymorphism in the downstream of TERTis associated with the risk of nasopharyngeal carcinoma in Chinese population. BMC Medicine.DOI
Yan Jiang, Wenjing Wang, Jiucun Wang, Ye Lu, Yanmei Chen, Jin Li, Dongxin Lin, Fuchu He, Haijian Wang (2011). Functional regulatory variants of MCL1 contribute to enhanced promoter activity and reduced risk of lung cancer in nonsmokers: Implications for context‐dependent phenotype of an antiapoptotic and antiproliferative gene in solid tumor. Cancer.DOI
Peiyao Li, Fuchu He, Gangqiao Zhou (2011). Association of human microRNA related genetic variations with cancer. Hereditas (Beijing).DOI
Xiaohui Zhu, Yan Wang, Hongxing Zhang, Xuan Eric Liu, Ting Chen, Ruifu Yang, Yuling Shi, Wu‐Chun Cao, Ping Li, Qingjun Ma, Yun Zhai, Fuchu He, Gangqiao Zhou, Cheng Cao (2011). Genetic Variation of the Human α-2-Heremans-Schmid Glycoprotein (AHSG) Gene Associated with the Risk of SARS-CoV Infection. PLoS ONE.DOI
Qiaoling Gong, Min Cheng, Hui Chen, Xiuying Liu, Youhui Si, Yang Yang, Yanzhi Yuan, Chaozhi Jin, Wei Zhong Yang, Fuchu He, Jian Wang (2011). Phospholipid scramblase 1 mediates hepatitis C virus entry into host cells. FEBS Letters.DOI
Xueli Zhang, Fuchu He (2011). The 12th Human Liver Proteome Project (HLPP) Workshop, September 2010, Sydney, Australia. PROTEOMICS.DOI
Aiying Nie, Lei Zhang, Guoquan Yan, Jun Yao, Yang Zhang, Haojie Lu, Pengyuan Yang, Fuchu He (2011). In Vivo Termini Amino Acid Labeling for Quantitative Proteomics. Analytical Chemistry.DOI
Wei Liu, Yufang Hou, Huahai Chen, Handong Wei, Weiran Lin, Jichang Li, Ming Zhang, Fuchu He, Ying Jiang (2011). Sample preparation method for isolation of single‐cell types from mouse liver for proteomic studies. PROTEOMICS.DOI
Zhongyang Liu, Qijun Liu, Hanchang Sun, Lin Hou, Hao Guo, Yunping Zhu, Dong Li, Fuchu He (2011). Evidence for the additions of clustered interacting nodes during the evolution of protein interaction networks from network motifs. BMC Evolutionary Biology.DOI
Yu Cui, Shan He, Cencan Xing, Kefeng Lu, Jian Wang, Guichun Xing, Anming Meng, Shunji Jia, Fuchu He, Lingqiang Zhang (2011). SCFFBXL15 regulates BMP signalling by directing the degradation of HECT‐type ubiquitin ligase Smurf1. The EMBO Journal.DOI
Hao Li, Lan Wang, Xianzhong Yan, Qijun Liu, Chaohui Yu, Handong Wei, Youming Li, Xuemin Zhang, Fuchu He, Ying Jiang (2011). A Proton Nuclear Magnetic Resonance Metabonomics Approach for Biomarker Discovery in Nonalcoholic Fatty Liver Disease. Journal of Proteome Research.DOI
Shu-long Li, Xin Liu, Lai Wei, Huifen Wang, Jiyang Zhang, Handong Wei, Xiaohong Qian, Ying Jiang, Fuchu He (2011). Plasma biomarker screening for liver fibrosis with the N-terminal isotope tagging strategy. Science China Life Sciences.DOI
Xing Long Guo, Shan Shen, Shanshan Song, Shan He, Yu Cui, Guichun Xing, Jian Wang, Yuxin Yin, Libin Fan, Fuchu He, Lingqiang Zhang (2011). The E3 Ligase Smurf1 Regulates Wolfram Syndrome Protein Stability at the Endoplasmic Reticulum. Journal of Biological Chemistry.DOI
Kefeng Lu, Ping Li, Minghua Zhang, Guichun Xing, Xin Li, Weihong Zhou, Mark G. Bartlam, Lingqiang Zhang, Zihe Rao, Fuchu He (2011). Pivotal Role of the C2 Domain of the Smurf1 Ubiquitin Ligase in Substrate Selection. Journal of Biological Chemistry.DOI
Ping Xie, Ying Tang, Shan Shen, Yunyan Wang, Guichun Xing, Yuxin Yin, Fuchu He, Lingqiang Zhang (2011). Smurf1 ubiquitin ligase targets Kruppel-like factor KLF2 for ubiquitination and degradation in human lung cancer H1299 cells. Biochemical and Biophysical Research Communications.DOI
Fuchao Ma, Hongxing Zhang, Yun Zhai, Wenfeng Huang, Chang Zhao, Shengqiu Ou, Hong Hao Zhou, Wenzhao Yuan, Zhifu Wang, Hongxue Wang, Wei Yue, Lixia Yu, Peiyao Li, Xia Xia, Mi Cai, Yang Zhang, Ying Cui, Fuchu He, Yilong Ma, Gangqiao Zhou (2011). Functional Polymorphism -31C/G in the Promoter of BIRC5 Gene and Risk of Nasopharyngeal Carcinoma among Chinese. PLoS ONE.DOI
Yanfang Ju, Jin-ju Yang, Rong Liu, Xiaolan Liu, Xuemei Du, Li Liu, ZhiCheng Chen, Jun Chi, ShuEr Liu, Yuan Z. Gao, Jianen Gao, Shunchang Jiao, Fuchu He, Qi‐Hong Sun (2011). Antigenically dominant proteins within the human liver mitochondrial proteome identified by monoclonal antibodies. Science China Life Sciences.DOI
Fuchu He (2011). At a glance: Proteomics in China. Science China Life Sciences.DOI
Aiying Nie, Haojie Lu, Pengyuan Yang, Fuchu He (2011). Comprehensive Profiling for Histone H4 of Human Liver Cells Using High Resolution LTQ‐Orbitrap Mass Spectrometry. Chinese Journal of Chemistry.DOI
贺福初 (2010). Systematic -omics analysis of HBV-associated hepatocellular carcinoma. 《第四届全国生物信息学与系统生物学学术大会》.
Ping Xie, Lu Li, Guichun Xing, Chunyan Tian, Yuxin Yin, Fuchu He, Lingqiang Zhang (2010). ATM-mediated NuSAP phosphorylation induces mitotic arrest. Biochemical and Biophysical Research Communications.DOI
Shan Wang, Chunyan Tian, Guichun Xing, Mei Gao, Wenjuan Jiao, Tingting Xiao, Yuxin Yin, Fuchu He, Lingqiang Zhang (2010). ARF‐dependent regulation of ATM and p53 associated KZNF (Apak) protein activity in response to oncogenic stress. FEBS Letters.DOI
He Fuchu (2010). Differential Proteomic Analysis in Rat Liver Regeneration Using 8-Plex iTRAQ Labeling Coupled with 2D LC-MS/MS. Journal of Instrumental Analysis.
He Fuchu (2010). Advance in the research of the ubiquitin-like molecule FAT10. Shengming kexue.
Wanlin Liu, Dong Li, Qijun Liu, Yunping Zhu, Fuchu He (2010). A novel parametric approach to mine gene regulatory relationship from microarray datasets. BMC Bioinformatics.DOI
Qiongming Liu, Qing Chen, Jian Wang, Ying Zhang, Ying Zhou, Cong Lin, Wei A. He, Fuchu He, Danke Xu (2010). A miniaturized sandwich immunoassay platform for the detection of protein-protein interactions. BMC Biotechnology.DOI
Ye Lu, Jie Liu, Chengzhao� Lin, Haijian Wang, Ying Jiang, Jiyao Wang, Pengyuan Yang, Fuchu He (2010). Peroxiredoxin 2: a potential biomarker for early diagnosis of Hepatitis B Virus related liver fibrosis identified by proteomic analysis of the plasma. BMC Gastroenterology.DOI
Ge Zhang, Tao Tang, Baosheng Guo, Lizhen Zheng, Heng Wu, Yaping Li, Xinluan Wang, Yixin He, Gang Li, Leung‐Kim Hung, Fuchu He, Lingqiang Zhang, Ling Qin (2010). Therapeutic RNAi targeting CKIP-1 as a potential bone anabolic strategy. Bone.DOI
Jie Ma, Jiyang Zhang, Songfeng Wu, Dong Li, Yunping Zhu, Fuchu He (2010). Improving the sensitivity of MASCOT search results validation by combining new features with Bayesian nonparametric model. PROTEOMICS.DOI
Xueqin Gao, Junjie Zheng, Laura Beretta, José María Mato, Fuchu He (2010). The 2009 Human Liver Proteome Project (HLPP) Workshop 26 September 2009, Toronto, Canada. PROTEOMICS.DOI
Hongxing Zhang, Yun Zhai, Zhibin Hu, Chen Hsuan Wu, Ji Qian, Wei‐Hua Jia, Fuchao Ma, Wenfeng Huang, Lixia Yu, Wei Yue, Zhifu Wang, Peiyao Li, Yang Zhang, Renxiang Liang, Zhongliang Wei, Ying Cui, Weimin Xie, Mi Cai, Xinsen Yu, Yunfei Yuan, Xia Xia, Xiumei Zhang, Hao Yang, Wei Qiu, Jingmin Yang, Feng Gong, Minshan Chen, Hongbing Shen, Dongxin Lin, Yi-Xin Zeng, Fuchu He, Gangqiao Zhou (2010). Genome-wide association study identifies 1p36.22 as a new susceptibility locus for hepatocellular carcinoma in chronic hepatitis B virus carriers. Nature Genetics.DOI
Yong Zhang, Jing Wang, Juping Yuan, Wanqiao Zhang, W. Guan, Zhen Wu, Chao Jin, Hong Chen, Lin Zhang, Xiao Yi Yang, Fuchu He (2010). Negative regulation of HDM2 to attenuate p53 degradation by ribosomal protein L26. Nucleic Acids Research.DOI
Jin‐Xin Bei, Yi Li, Wei-Hua Jia, Bing Feng, Gangqiao Zhou, Li-Zhen Chen, Qi-Sheng Feng, Hui-Qi Low, Hongxing Zhang, Fuchu He, E Shyong Tai, Tiebang Kang, Edison T. Liu, Jianjun Liu, Yi-Xin Zeng (2010). A genome-wide association study of nasopharyngeal carcinoma identifies three new susceptibility loci. Nature Genetics.DOI
Jing Nie, Min Wu, Jian Wang, Guichun Xing, Fuchu He, Lingqiang Zhang (2010). REGγ proteasome mediates degradation of the ubiquitin ligase Smurf1. FEBS Letters.DOI
Wanqiao Zhang, Jian Wang, Ying Zhang, Yanzhi Yuan, Wei Guan, Chaozhi Jin, Hui Chen, Xiaohui Wang, Xiaoming Yang, Fuchu He (2010). The Scaffold Protein TANK/I-TRAF Inhibits NF-κB Activation by Recruiting Polo-like Kinase 1. Molecular Biology of the Cell.DOI
Jing Nie, Ping Xie, Lin Liu, Guichun Xing, Zhijie Chang, Yuxin Yin, Chunyan Tian, Fuchu He, Lingqiang Zhang (2010). Smad Ubiquitylation Regulatory Factor 1/2 (Smurf1/2) Promotes p53 Degradation by Stabilizing the E3 Ligase MDM2. Journal of Biological Chemistry.DOI
Yan Zhao, Wei Jia, Wei Sun, Wenhai Jin, Lihai Guo, Junying Wei, Wantao Ying, Yangjun Zhang, Yongming Xie, Ying Jiang, Fuchu He, Xiaohong Qian (2010). Combination of Improved 18O Incorporation and Multiple Reaction Monitoring: A Universal Strategy for Absolute Quantitative Verification of Serum Candidate Biomarkers of Liver Cancer. Journal of Proteome Research.DOI
Jing Nie, Hua Wang, Fuchu He, Huizhe Huang (2010). Nusap1 is essential for neural crest cell migration in zebrafish. Protein & Cell.DOI
Shenli Xi, Yi Tie, Kefeng Lu, Minghua Zhang, Xiushan Yin, Jie Chen, Guichun Xing, Chunyan Tian, Xiaofei Zheng, Fuchu He, Lingqiang Zhang (2010). N‐terminal PH domain and C‐terminal auto‐inhibitory region of CKIP‐1 coordinate to determine its nucleus‐plasma membrane shuttling. FEBS Letters.DOI
Li Tang, Juntao Yang, Xiaoming Tang, Wantao Ying, Xiaohong Qian, Fuchu He (2010). The DC‐SIGN family member LSECtin is a novel ligand of CD44 on activated T cells. European Journal of Immunology.DOI
Aniel Sánchez, Wei Sun, Lan Wang, Jie Ma, Lazaro Hiram Betancourt, Jeovanis Gil, Yasset Pérez‐Riverol, Jorge Fernández-de-Cossío, Gabrìel Padrón, Ying Jiang, Fuchu He, Luis Javier González, Vladimir Besada (2010). Selective Isolation—Detection of Two Different Positively Charged Peptides Groups by Strong Cation Exchange Chromatography and Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry: Application to Proteomics Studies. European Journal of Mass Spectrometry.DOI
Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, Lin Hou, Jie Ma, Wanlin Liu, Daming Ren, Yunping Zhu, Fuchu He (2010). Computational identification of rare codons of Escherichia coli based on codon pairs preference. BMC Bioinformatics.DOI
Yanping Song, Ying Jiang, Wantao Ying, Yan Qing Gong, Yujuan Yan, Dong Sik Yang, Jie Ma, Xiaofang Xue, Fan Zhong, Songfeng Wu, Yunwei Hao, Aihua Sun, Tao Li, Wei Sun, Handong Wei, Yunping Zhu, Xiaohong Qian, Fuchu He (2010). Quantitative Proteomic Survey of Endoplasmic Reticulum in Mouse Liver. Journal of Proteome Research.DOI
Fuchu He, Maxey C. M. Chung, T. William Jordan (2010). Chinese Human Liver Proteome Project: A Pathfinder of HUPO Human Liver Proteome Project. Journal of Proteome Research.DOI
Xueqin Gao, Xueli Zhang, Junjie Zheng, Fuchu He (2010). Proteomics in China: Ready for prime time. Science China Life Sciences.DOI
Dong Yang, Ying Jiang, Fuchu He（2009）. ゲノムとフェノミクスの変数の間の相関の統合された見解【Powered by NICT】.
Dong Cheol Yang, Ying Jiang, Fuchu He (2009). An integrated view of the correlations between genomic and phenomic variables. Journal of genetics and genomics/Journal of Genetics and Genomics.DOI
Wei Sun, Jie Ma, Songfeng Wu, Dong Cheol Yang, Yujuan Yan, Kehui Liu, Jinglan Wang, Longqin Sun, Ning Chen, Handong Wei, Yunping Zhu, Baocai Xing, Xiaohang Zhao, Xiaohong Qian, Ying Jiang, Fuchu He (2009). Characterization of the Liver Tissue Interstitial Fluid (TIF) Proteome Indicates Potential for Application in Liver Disease Biomarker Discovery. Journal of Proteome Research.DOI
Xuequn Zhang, Juntao Yang, Yuanbiao Guo, Hua Ye, Chaohui Yu, Chengfu Xu, Lei Xu, Songfeng Wu, Wei Sun, Hangdong Wei, Xueqin Gao, Yunping Zhu, Xiaohong Qian, Ying Jiang, Youming Li, Fuchu He (2009). Functional proteomic analysis of nonalcoholic fatty liver disease in rat models. Hepatology.DOI
Shan Li, Kefeng Lu, Jian Wang, Liguo An, Guiwen Yang, Hui Chen, Yu Cui, Xiushan Yin, Ping Xie, Guichun Xing, Fuchu He, Lingqiang Zhang (2009). Ubiquitin ligase Smurf1 targets TRAF family proteins for ubiquitination and degradation. Molecular and Cellular Biochemistry.DOI
Yuanbiao Guo, Xuequn Zhang, Jian Huang, Yan Jun Zeng, Wei Liu, Chao Geng, Ka Wan Li, Dong Cheol Yang, Songfeng Wu, Handong Wei, Ze‐Guang Han, Xiaohong Qian, Ying Jiang, Fuchu He (2009). Relationships between Hematopoiesis and Hepatogenesis in the Midtrimester Fetal Liver Characterized by Dynamic Transcriptomic and Proteomic Profiles. PLoS ONE.DOI
Xiaoqun Dong, Gangqiao Zhou, Yun Zhai, Hongxing Zhang, Hao Yang, Lianteng Zhi, Xiumei Zhang, Jiayou Chu, Fuchu He (2009). Association of DLC1 gene polymorphism with susceptibility to hepatocellular carcinoma in Chinese hepatitis B virus carriers. Cancer Epidemiology.DOI
Aihua Sun, Jiyang Zhang, Chunping Wang, Dong Sik Yang, Handong Wei, Yunping Zhu, Ying Jiang, Fuchu He (2009). Modified Spectral Count Index (mSCI) for Estimation of Protein Abundance by Protein Relative Identification Possibility (RIPpro): A New Proteomic Technological Parameter. Journal of Proteome Research.DOI
Aihua Sun, Ying Jiang, Xue Wang, Qijun Liu, Fan Zhong, Quanyuan He, Wei Guan, Hao Li, Yulin Sun, Liang Shi, Hong Yu, Dong Sik Yang, Yang Xu, Yanping Song, Wei Tong, Dong Li, Chengzhao� Lin, Yunwei Hao, Chao Geng, Dong Yun, Xuequn Zhang, Xiaoyan Yuan, Ping Chen, Yunping Zhu, Yixue Li, Songping Liang, Xiaohang Zhao, Siqi Liu, Fuchu He (2009). Liverbase: A Comprehensive View of Human Liver Biology. Journal of Proteome Research.DOI
Shan Wang, Chunyan Tian, Tingtiang Xiao, Guichun Xing, Fuchu He, Lingqiang Zhang, Hong Chen (2009). Differential regulation of Apak by various DNA damage signals. Molecular and Cellular Biochemistry.DOI
Zhihao Wu, Xiao‐Ai Zhang, Juntao Yang, Guangzhou Wu, Ying Zhang, Yanzhi Yuan, Chaozhi Jin, Zhijie Chang, Jian Wang, Xiaoming Yang, Fuchu He (2009). Nuclear protein IκB-ζ inhibits the activity of STAT3. Biochemical and Biophysical Research Communications.DOI
Xiaoping Chen, Haijian Wang, Gangqiao Zhou, Xiumei Zhang, Xiaojia Dong, Lianteng Zhi, Jin Li, Fuchu He (2009). Molecular Population Genetics of Human CYP3A Locus: Signatures of Positive Selection and Implications for Evolutionary Environmental Medicine. Environmental Health Perspectives.DOI
Wei Liu, Dong Li, Jian Wang, Hongwei Xie, Yunping Zhu, Fuchu He (2009). Proteome-wide Prediction of Signal Flow Direction in Protein Interaction Networks Based on Interacting Domains. Molecular & Cellular Proteomics.DOI
Xinrui Duan, Wei Yue, Libing Liu, Zhengping Li, Yuliang Li, Fuchu He, Daoben Zhu, Gangqiao Zhou, Shu Wang (2009). Single-nucleotide polymorphism (SNP) genotyping using cationic conjugated polymers in homogeneous solution. Nature Protocols.DOI
Xiaozhao Deng, Wei Shan Li, Yao Sun, Heming Wei, Yang Jiang, Fuchu He (2009). Exploring Rat Plasmatic Proteomes: What Triggered the Liver Regeneration? (Supplementary materials). Protein and Peptide Letters.DOI
Chunyan Tian, Guichun Xing, Ping Xie, Kefeng Lu, Jing Nie, Jian Wang, Li Li, Mei Gao, Lingqiang Zhang, Fuchu He (2009). KRAB-type zinc-finger protein Apak specifically regulates p53-dependent apoptosis. Nature Cell Biology.DOI
Xinyu Deng, Wenrui Li, Ning Chen, Yanwei Sun, Handong Wei, Ying Jiang, Fuchu He (2009). Exploring the priming mechanism of liver regeneration: proteins and protein complexes. PROTEOMICS.DOI
Yi Li, Bingtao Hao, Xuezhang Kuai, Guichun Xing, Juntao Yang, Jie Chen, Li Tang, Lingqiang Zhang, Fuchu He (2009). C-type lectin LSECtin interacts with DC-SIGNR and is involved in hepatitis C virus binding. Molecular and Cellular Biochemistry.DOI
Dong YUN, Haojie Lu, Haijian WANG, Yang Zhang, Gang Cheng, Hong Jin, Yanbao Yu, Yawei Xu, Pengyuan Yang, Fuchu He (2009). Iterative Non‐m/z‐sharing Rule for Confident and Sensitive Protein Identification of Non‐shotgun Proteomics. Chinese Journal of Chemistry.DOI
Kehui Liu, Jiyang Zhang, Jinglan Wang, Liyan Zhao, Peng Xu, Wei Jia, Wantao Ying, Yunping Zhu, Hongwei Xie, Fuchu He, Xiaohong Qian (2009). Relationship between Sample Loading Amount and Peptide Identification and Its Effects on Quantitative Proteomics. Analytical Chemistry.DOI
Wei Sun, Fan Zhong, Lianteng Zhi, Gangqiao Zhou, Fuchu He (2009). Systematic -omics analysis of HBV-associated liver diseases. Cancer Letters.DOI
Ying Zhou, Li Lu, Qiongming Liu, Guichun Xing, Xuezhang Kuai, Jing Sun, Xiushan Yin, Jian Wang, Lingqiang Zhang, Fuchu He (2008). E3 ubiquitin ligase SIAH1 mediates ubiquitination and degradation of TRB3. Cellular Signalling.DOI
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yunping Zhu, Fuchu He (2008). A nonparametric model for quality control of database search results in shotgun proteomics. BMC Bioinformatics.DOI
Guohong Deng, Gangqiao Zhou, Rong Zhang, Yun Zhai, Wenli Zhao, Zehui Yan, Chunqing Deng, Xiaoyan Yuan, Baoyan Xu, Xiaojia Dong, Xiumei Zhang, Xuqing Zhang, Zhijian Yao, Yan Shen, Boqing Qiang, Yuming Wang, Fuchu He (2008). Regulatory Polymorphisms in the Promoter of CXCL10 Gene and Disease Progression in Male Hepatitis B Virus Carriers. Gastroenterology.DOI
Hao Li, Ying Jiang, Fuchu He (2008). A potential role of GW4064 to inhibit gut bacterial overgrowth by activating FXR in suppression of ethanol-induced liver injury. Bioscience hypotheses.DOI
Dong Yun, Haojie Lu, Pengyuan Yang, Fuchu He (2008). Spectral quality assessment and application for gel-based matrix-assisted laser desorption ionization-time of flight tandem mass spectrometer. Analytica Chimica Acta.DOI
Wei Liu, Dong Li, Yunping Zhu, Fuchu He (2008). Bioinformatics analyses for signal transduction networks. Science in China Series C Life Sciences.DOI
Shaohui Sui, Jinglan Wang, Bing Yang, Lina Song, Jiyang Zhang, Ming Chen, Jinfeng Liu, Zhuang Lu, Yun Cai, Shawn Chen, Wei Bi, Yunping Zhu, Fuchu He, Xiaohong Qian (2008). Phosphoproteome analysis of the human Chang liver cells using SCX and a complementary mass spectrometric strategy. PROTEOMICS.DOI
Songfeng Wu, Xue Xiao-Fang, Zhang Ji-Yang, Ying Wantao, Jie Ma, Xiaohong Qian, Yunping Zhu, He Fuchu (2008). Reversed-shift Database: Alternative Method for the of Evaluation Peptide Mass Fingerprint Results. Chinese Journal of Analytical Chemistry.DOI
Jiyang Zhang, Jie Ma, Lei Dou, Songfeng Wu, Xiaohong Qian, Hongwei Xie, Yunping Zhu, Fuchu He (2008). Mass Measurement Errors of Fourier-Transform Mass Spectrometry (FTMS): Distribution, Recalibration, and Application. Journal of Proteome Research.DOI
Xiaoyan Yuan, Gangqiao Zhou, Yun Zhai, Weimin Xie, Ying Cui, Jia Cao, Lianteng Zhi, Hongxing Zhang, Hao Yang, Xiao‐Ai Zhang, Wei Qiu, Yong Peng, Xiumei Zhang, Ling Yu, Xia Xia, Fuchu He (2008). Lack of Association between the Functional Polymorphisms in the Estrogen-Metabolizing Genes and Risk for Hepatocellular Carcinoma. Cancer Epidemiology Biomarkers & Prevention.DOI
Ning Chen, Wei Sun, Xinyu Deng, Yunwei Hao, Xilin Chen, Baocai Xing, Wei Jia, Jie Ma, Handong Wei, Yunping Zhu, Xiaohong Qian, Ying Jiang, Fuchu He (2008). Quantitative proteome analysis of HCC cell lines with different metastatic potentials by SILAC. PROTEOMICS.DOI
Jiyang Zhang, Jie Ma, Lei Dou, Songfeng Wu, Xiaohong Qian, Hongwei Xie, Yunping Zhu, Fuchu He (2008). Bayesian Nonparametric Model for the Validation of Peptide Identification in Shotgun Proteomics. Molecular & Cellular Proteomics.DOI
Qiaojun Fang, Andrew D. Strand, Wendy Law, Vitor Marcel Faça, Matthew Fitzgibbon, Nathalie Hamel, Benoit Houle, Xin Liu, Damon May, Gereon Poschmann, Line Roy, Kai Stuühler, Wantao Ying, Jiyang Zhang, Zhaobin Zheng, John J.M. Bergeron, Samir Hanash, Fuchu He, Blair R. Leavitt, Helmut E. Meyer, Xiaohong Qian, Martin W. McIntosh (2008). Brain-specific Proteins Decline in the Cerebrospinal Fluid of Humans with Huntington Disease. Molecular & Cellular Proteomics.DOI
Kun Liu, Qian Lu, Jinglan Wang, Wenrui Li, Xinyu Deng, Xilin Chen, Wei Sun, Handong Wei, Xiaohong Qian, Ying Jiang, Fuchu He (2008). Two-dimensional Blue Native/SDS-PAGE Analysis Reveals Heat Shock Protein Chaperone Machinery Involved in Hepatitis B Virus Production in HepG2.2.15 Cells. Molecular & Cellular Proteomics.DOI
Lan Wang, Youming Li, Fuchu He, Ying Jiang (2008). [Nonalcoholic fatty liver disease and immune disturbance]. PubMed.
Jinfu Sun, Ying Jiang, Zixue Shi, Yujuan Yan, Huancheng Guo, Fuchu He, Changchun Tu (2008). Proteomic Alteration of PK-15 Cells after Infection by Classical Swine Fever Virus. Journal of Proteome Research.DOI
Wei Qiu, Gangqiao Zhou, Yun Zhai, Xiumei Zhang, Weimin Xie, Hongxing Zhang, Hao Yang, Lianteng Zhi, Xiaoyan Yuan, Xiao‐Ai Zhang, Fuchu He (2008). No Association of MMP-7, MMP-8, and MMP-21 Polymorphisms with the Risk of Hepatocellular Carcinoma in a Chinese Population. Cancer Epidemiology Biomarkers & Prevention.DOI
Junjie Zheng, Xue Gao, José María Mato, Laura Beretta, Fuchu He (2008). Report of the 9th HLPP Workshop October 2007, Seoul, Korea. PROTEOMICS.DOI
Kefeng Lu, Xiushan Yin, Tujun Weng, Shenli Xi, Li Li, Guichun Xing, Xuan Cheng, Xiao Yi Yang, Lingqiang Zhang, Fuchu He (2008). Targeting WW domains linker of HECT-type ubiquitin ligase Smurf1 for activation by CKIP-1. Nature Cell Biology.DOI
Jian Wang, Yanzhi Yuan, Ying Zhou, Longhua Guo, Lingqiang Zhang, Xuezhang Kuai, Binwei Deng, Zhi Pan, Dong Li, Fuchu He (2008). Protein Interaction Data Set Highlighted with Human Ras-MAPK/PI3K Signaling Pathways. Journal of Proteome Research.DOI
Qiao Sun, Juntao Yang, Guichun Xing, Qi‐Hong Sun, Lingqiang Zhang, Fuchu He (2008). Expression of GSDML Associates with Tumor Progression in Uterine Cervix Cancer. Translational Oncology.DOI
Yan Xue, Dong Yun, Alex Esmon, Peng Zou, Shuai Zuo, Yanbao Yu, Fuchu He, Pengyuan Yang, Xian Chen (2008). Proteomic Dissection of Agonist-Specific TLR-Mediated Inflammatory Responses on Macrophages at Subcellular Resolution. Journal of Proteome Research.DOI
Fuchu He, Siqi Liu (2008). CNHUPO. Molecular & Cellular Proteomics.DOI
Hua Zhong, Dong Yun, Chen Zhang, Pengyuan Yang, Huizhi Fan, Fuchu He (2008). Comprehensive proteome analysis of mouse liver by ampholyte‐free liquid‐phase isoelectric focusing. Electrophoresis.DOI
Haijian Wang, Yang Liu, Wen Tan, Yang Zhang, Naiqing Zhao, Yan Jiang, Chengzhao� Lin, Bingtao Hao, Dan Zhao, Ji Qian, Daru Lu, Jin Li, Qingyi Wei, Dongxin Lin, Fuchu He (2008). Association of the variable number of tandem repeats polymorphism in the promoter region of the SMYD3 gene with risk of esophageal squamous cell carcinoma in relation to tobacco smoking. Cancer Science.DOI
Dong Li, Wanlin Liu, Zhongyang Liu, Jian Wang, Qijun Liu, Yunping Zhu, Fuchu He (2008). PRINCESS, a Protein Interaction Confidence Evaluation System with Multiple Data Sources. Molecular & Cellular Proteomics.DOI
TingGui Chen, Songfeng Wu, Gangqiao Zhou, Yunping Zhu, Fuchu He (2008). Renewal and preliminary study of expressed sequence tags database on human fetal liver aged 22 wk of gestation. 《中国科学通报：英文版》.DOI
Xiangjun Liu, Zhi Mei PAN, Lingqiang Zhang, Qiao Sun, JingHong Wan, Chunyan Tian, Guichun Xing, Juntao Yang, Xiaolin Liu, Jizhi Jiang, Fuchu He (2007). JAB1 accelerates mitochondrial apoptosis by interaction with proapoptotic BclGs. Cellular Signalling.DOI
Yanwei Sun, Xinyu Deng, Wenrui Li, Yujuan Yan, Handong Wei, Ying Jiang, Fuchu He (2007). Liver proteome analysis of adaptive response in rat immediately after partial hepatectomy. PROTEOMICS.DOI
Zhi Pan, Jian Wang, Xiushan Yin, Ping Xie, Juntao Yang, Jizhi Jiang, Lingqiang Zhang, Fuchu He (2007). The function study on the interaction between Grb2 and AMPK. Molecular and Cellular Biochemistry.DOI
Wei Sun, Baocai Xing, Yi Sun, Xiaojuan Du, Min Lu, Chunyi Hao, Zhuang Lu, Wei Mi, Songfeng Wu, Handong Wei, Xueqin Gao, Yunping Zhu, Ying Jiang, Xiaohong Qian, Fuchu He (2007). Proteome Analysis of Hepatocellular Carcinoma by Two-dimensional Difference Gel Electrophoresis. Molecular & Cellular Proteomics.DOI
Li Lu, Ying Zhou, Libo Sun, Guichun Xing, Chunyan Tian, Jing Sun, Lingqiang Zhang, Fuchu He (2007). NuSAP is degraded by APC/C–Cdh1 and its overexpression results in mitotic arrest dependent of its microtubules' affinity. Cellular Signalling.DOI
Gangqiao Zhou, Yun Zhai, Ying Cui, Wei Qiu, Hao Yang, Xiumei Zhang, Xiaojia Dong, Ying Zi He, Kai‐Tai Yao, Hongxing Zhang, Yong Peng, Xiaoyan Yuan, Lianteng Zhi, Xiao‐Ai Zhang, Fuchu He (2007). Functional polymorphisms and haplotypes in the promoter of theMMP2gene are associated with risk of nasopharyngeal carcinoma. Human Mutation.DOI
Man Wai Ng, Gangqiao Zhou, Wai Po Chong, Loretta Wing Yan Lee, Hkw Law, Hongxing Zhang, Wilfred Hing Sang Wong, Susanna F. S. Fok, Yun Zhai, Raymond WH Yung, Eudora Y. Chow, Ka Leung Au, Eric Y. T. Chan, Wilina W.L. Lim, Malik J. S. Peiris, Fuchu He, YL Lau (2007). The association of RANTES polymorphism with severe acute respiratory syndrome in Hong Kong and Beijing Chinese. BMC Infectious Diseases.DOI
Lianteng Zhi, Gangqiao Zhou, Hongxing Zhang, Yun Zhai, Hao Yang, Fang Zhang, Shixin Wang, Maoti Wei, Wu‐Chun Cao, Fuchu He (2007). Lack of support for an association between CLEC4M homozygosity and protection against SARS coronavirus infection. Nature Genetics.DOI
He Fuchu (2007). The progress and perspectives of proteomics in China. Shengming kexue.
Pan Shen, Qijian Zheng, Aishi Xu, Junhua Liu, Yushan Hou, Chao Gao, Chunyan Tian, Fuchu He, Dong Cheol Yang (2020). Novel non-transposable-element regulation patterns of KZFP family reveal new drivers of its rapid evolution. bioRxiv (Cold Spring Harbor Laboratory).DOI
Yunzhi Wang, Xiaohui Wu, Rui Ge, Lei Song, Kai Li, Sha Tian, Lili Cai, Mingwei Liu, Wenhao Shi, Guoying Yu, Bei Zhen, Yì Wáng, Fuchu He, Jun Qin, Chen Ding (2020). Global Screening of Sentrin-Specific Protease Family Substrates in SUMOylation. bioRxiv (Cold Spring Harbor Laboratory).DOI
书籍章节
Ning L. Chen, Mingwei Liu, Jun Qin, Wei Sun, Fuchu He (2019). High-pH Reversed-Phase Pre-Fractionation for In-Depth Shotgun Proteomics. Neuromethods.DOI
Dong‐Hua Yang, Xinyu Deng, Ying Jiang, Fuchu He (2011). Analysis of Protein Complexes by 2D Blue Native/SDS–PAGE and Antibody-Shift Assay. Neuromethods.DOI