李晨虹

2026

基于环境DNA重组酶聚合酶技术的鳄雀鳝入侵检测引物与探针开发

《上海海洋大学学报》

2026

LiBird: A new universal primer enhancing avian environmental DNA metabarcoding

Avian Research

2026

Whole-genome resequencing reveals genetic divergence, local adaptation, and conservation priorities in three helmet catfishes (complex Cranoglanis bouderius)

BMC Genomics

DOI

2026

Phylogenomics of Rhinogobius gobies reveal northern-southern divergence and trait evolution in China

Molecular Phylogenetics and Evolution

DOI

2026

Population genomic assessment of the endangered endemic catfish Glyptothorax stocki reveals distinct lineages in Pakistan

Hydrobiologia

DOI

2025

Multi-locus environmental DNA markers and taxon-specific primers enhanced detection rate of invasive tilapia

Neobiota，Vol. 1010

DOI

2025

Estimation of Species Abundance Based on the Number of Segregating Sites Using Environmental DNA (eDNA)

Molecular Ecology Resources，Vol. 250, No. 60

DOI

2025

基于环境DNA多重PCR技术的大薸入侵监测引物开发与验证

《上海海洋大学学报》

2025

Phylogenomics of an early-branching clade of Orthocladiinae (Diptera: Chironomidae)

Molecular Phylogenetics and Evolution

DOI

2025

Population Patterns and Dynamics of Ilisha elongata (Clupeiformes: Pristigasteridae) Revealed by Target Enrichment Data

Evolutionary Applications

DOI

2025

Exon-capture data resolve relationships resulting from a rapid radiation within family Gobiidae

Molecular Phylogenetics and Evolution

DOI

2025

Resolving taxonomic uncertainties in ailiid catfishes (Siluriformes: Ailiidae) using Genome-Scale data

Molecular Phylogenetics and Evolution

DOI

2025

A chromosome-level genome assembly of the Chinese herring ( Ilisha elongata ) uncovered its population dynamics and genes related to lipid metabolism

Journal of Heredity

DOI

2025

High-quality genome assembly and annotation of the white-cheeked goby, Rhinogobius duospilus (Herre, 1935) (Gobiiformes: Oxudercidae)

G3 Genes Genomes Genetics

DOI

2025

Unveiling the potential of eDNA/eRNA approaches for monitoring the critically endangered Yangtze finless porpoise

Global Ecology and Conservation

DOI

2025

Stochastic Processes Drive the Assembly of Planktonic Ciliates in A Trellised River Network

Journal of Eukaryotic Microbiology

DOI

2025

Species Delimitation and Cryptic Diversity in Rheotanytarsus Thienemann & Bause, 1913 (Diptera: Chironomidae) Based on DNA Barcoding

Insects

DOI

2025

Chromosome-Level Genome Assembly and Comparative Transcriptome Analyses Identified Energy Conservation as a Key Strategy for Anadromous Adaptation of the Hilsa Shad, Tenualosa ilisha (Clupeiformes: Dorosomatidae)

Biomolecules

DOI

2025

The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae)

Mitochondrial DNA Part B

DOI

2024

基于基因富集数据的中国金鱼品种谱系研究

《上海海洋大学学报》

2024

基于基因富集的鸟类线粒体基因组快速获取方法研究

《生物技术进展》

2024

浙江丽水发现德化脊蛇

《动物学杂志》

2024

海南新沙塘鳢的繁殖和胚胎发育

《湖南农业大学学报(自然科学版)》

DOI

2024

Yuzaoea gen. nov., a new biraphid diatom(Bacillariophyceae)genus and its phylogenetic significance

Acta Oceanologica Sinica

2024

DNA barcoding of catfishes (Order: Siluriformes) with description of two new records from eastern region of Nepal

Indian Journal of Fisheries

DOI

2024

High-quality genome assembly and annotation of the crested gecko ( Correlophus ciliatus )

G3 Genes Genomes Genetics

DOI

2024

Microdous hanlini (Gobiiformes: Odontobutidae), a new species of the fine-toothed sleepers from Guangxi, China

Zootaxa

DOI

2024

Real-Time Monitoring on the Chinese Giant Salamander Using RPA-LFD

International Journal of Molecular Sciences

DOI

2024

Towards a Comprehensive DNA Barcode Library of Stenochironomus Kieffer, 1919 (Diptera: Chironomidae) from China

Diversity

DOI

2024

Divergence of the freshwater sleeper, Neodontobutis hainanensis (Chen, 1985) (Teleostei, Odontobutidae), in the Pearl River basin and on Hainan Island of southern China

ZooKeys

DOI

2024

DNA Barcoding of Catfishes (Order: Siluriformes) with New Records of Two Species from Eastern Nepal

Journal of Applied Ichthyology

DOI

2024

First record of the non-native vermiculated sailfin catfish Pterygoplichthys disjunctivus (Weber, 1991) from Lohandra River, Eastern Nepal

BioInvasions Records

DOI

2024

Confirmation of hilsa shad (Tenualosa ilisha) in Vietnamese waters: a morphological and genetic analysis

Journal of the Marine Biological Association of the United Kingdom

DOI

2023

Optimization of the in-silico mate-pair method improves contiguity and accuracy of genome assembly

Ecology And Evolution，Vol. 13, No. 1

DOI

2023

环境DNA技术在水生生物监测中的挑战、突破和发展前景

《上海海洋大学学报》

2023

Molecular phylogenetics of the fresh water sleepers Odontobutis (Gobiiformes: Odontobutidae) and its implications on biogeography of freshwater ichthyofauna of East Asia

Molecular Phylogenetics and Evolution

DOI

2023

New mitogenomes from the genus Cricotopus (Diptera: Chironomidae, Orthocladiinae): Characterization and phylogenetic implications

Archives of Insect Biochemistry and Physiology

DOI

2023

Assessing riverine fish community diversity and stability by eDNA metabarcoding

Ecological Indicators

DOI

2023

High‐throughput genotyping in estimating genetic resources and detecting pathogens in aquaculture

Journal of the World Aquaculture Society

DOI

2023

Comparative genomics revealed drastic gene difference in two small Chinese perches, Siniperca undulata and S. obscura

G3 Genes Genomes Genetics

DOI

2023

Mitochondrial Genome Uncovered Hidden Genetic Diversity in Microdous chalmersi (Teleostei: Odontobutidae)

Fishes

DOI

2023

First Record of Catfish Amblyceps waikhomi (Darshan, Kachari, Dutta, Ganguly, and Das 2016) (Siluriformes: Amblycipitidae) for Nepal from the Singhiya River of Morang District, Eastern Nepal

International Journal of Zoology

DOI

2023

Microdous amblyrhynchos sp. nov., a new member of the small-toothed sleepers (Teleostei, Gobiiformes, Odontobutidae) from Guangxi, southern China

ZooKeys

DOI

2022

环境DNA技术与传统捕捞揭示崇明岛内河鱼类多样性

《上海海洋大学学报》

2022

重组酶聚合酶扩增反应结合侧流层析试纸条技术快速鉴别大西洋鳕鱼制品真伪

《食品与发酵工业》

2022

A high-quality genome assembly of the Laotian shad (Tenualosa thibaudeaui), an endemic species of the Mekong River Basin

Journal of Heredity

DOI

2022

Molecular phylogenetics of the Clupeiformes based on exon-capture data and a new classification of the order

Molecular Phylogenetics and Evolution

DOI

2022

Population Structure, Genetic Diversity, and Conservation Strategies of a Commercially Important Sleeper Fish, Odontobutis potamophilus (Gobiiformes: Odontobutidae) Based on Gene-Capture Data

Frontiers in Genetics

DOI

2022

Comparative Analysis of Mitogenomes of Chironomus (Diptera: Chironomidae)

Insects

DOI

2022

“Omics” data unveil early molecular response underlying limb regeneration in the Chinese mitten crab, Eriocheir sinensis

Science Advances

DOI

2022

First records of Epinephelus bleekeri and Epinephelus erythrurus and Molecular Confirmation of Diagramma pictum and Nemipterus japonicus from Bangladesh Waters

Thalassas An International Journal of Marine Sciences

DOI

2022

Range-wide population genetics of the tapertail anchovy Coilia nasus based on exon-capture data

Marine Biodiversity

DOI

2022

Neodontobutis lani, a new sleeper fish of the family Odontobutidae (Teleostei: Gobiiformes) from Guangxi, southern China

Zootaxa

DOI

2022

A modified protocol with less clean-up steps increased efficiency and product yield of sequencing library preparation

3 Biotech

DOI

2022

First report of de novo assembly and annotation from brain and blood transcriptome of an anadromous shad, Alosa sapidissima

BMC Genomic Data

DOI

2022

Diversifying of Two Pampus Species across the Indo–Pacific Barrier and the Origin of the Genus

Diversity

DOI

2021

Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics

Molecular Ecology Resources，Vol. 210, No. 30

DOI

2021

Exon-capture data and locus screening provide new insights into the phylogeny of flatfishes (Pleuronectoidei)

Molecular Phylogenetics and Evolution

DOI

2021

Cross-species gene enrichment revealed a single population of Hilsa shad (Tenualosa ilisha) with low genetic variation in Bangladesh waters

Scientific Reports

DOI

2021

A high-resolution genome of an euryhaline and eurythermal rhinogoby (Rhinogobius similis Gill 1895)

G3 Genes Genomes Genetics

DOI

2021

Inline index helped in cleaning up data contamination generated during library preparation and the subsequent steps

Molecular Biology Reports

DOI

2021

The complete mitogenome of the blackgill catshark, Parmaturus melanobranchus (Chan, 1966)

Mitochondrial DNA Part B

DOI

2021

Introgressive hybridization between two close speciesSiniperca chuatsiandSiniperca kneri(Percomorpharia: Sinipercidae) in the Middle Reaches of the Yangtze River

Aquatic Living Resources

DOI

2020

When parasites persist: tapeworms survive host extinction and reveal waves of dispersal across Beringia

Proceedings Of The Royal Society B-Biological Sciences，Vol. 287, No. 19410

DOI

2020

太平洋西部鳓鱼隐蔽种的界定及系统发育关系重建

《基因组学与应用生物学》

DOI

2020

Genetic diversity of Hilsa kelee collected from the Bay of Bengal and the Arabian Sea

Marine Biodiversity

DOI

2020

A new perspective on biogeographic barrier in the flathead grey mullet (Pisces: Mugilidae) from the northwest Pacific

Genes & Genomics

DOI

2020

Genetic and morphological differences between yellowtail kingfish (Seriola lalandi) from the Bohai Sea, China and the Southern Ocean, Australia

Aquaculture and Fisheries

DOI

2020

High-Quality Genome Assembly and Annotation of the Big-Eye Mandarin Fish (Siniperca knerii)

G3 Genes Genomes Genetics

DOI

2020

Brachyuran Crab Fauna Character Estimated from Marine Water of Bangladesh and Noted New Record (Crustacea: Decapoda) as Distribution

Open Journal of Marine Science

DOI

2019

应用单核苷酸多态性(SNP)标记鉴定短颌鲚、湖鲚和刀鲚

《上海海洋大学学报》

2019

《普通动物学》全英文教学的实践与思考

《教育现代化》

DOI

2019

Molecular systematics of Pampus (Perciformes: Stromateidae) based on thousands of nuclear loci using target-gene enrichment

Molecular Phylogenetics and Evolution

DOI

2019

Convergent evolution misled taxonomy in schizothoracine fishes (Cypriniformes: Cyprinidae)

Molecular Phylogenetics and Evolution

DOI

2019

Multiple freshwater invasions of the tapertail anchovy (Clupeiformes: Engraulidae) of the Yangtze River

Ecology and Evolution

DOI

2019

Gene markers for exon capture and phylogenomics in ray‐finned fishes

Ecology and Evolution

DOI

2019

Assexon: Assembling Exon Using Gene Capture Data

Evolutionary Bioinformatics

DOI

2018

Phylogenomic analysis on the exceptionally diverse fish clade Gobioidei (Actinopterygii: Gobiiformes) and data-filtering based on molecular clocklikeness

Molecular Phylogenetics and Evolution

DOI

2018

A phylogenomic approach to reconstruct interrelationships of main clupeocephalan lineages with a critical discussion of morphological apomorphies

BMC Evolutionary Biology

DOI

2018

Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data

Proceedings of the National Academy of Sciences

DOI

2018

A new species of Rhinogobius (Pisces: Gobiidae), with analyses of its DNA barcode

Zootaxa

DOI

2017

中国小黄黝鱼种群遗传结构和分化研究

《上海海洋大学学报》

2017

鲚属单核苷酸多态性位点(SNPs)标记开发及在物种界定中的应用初探

《上海海洋大学学报》

2017

Molecular systematics and phylogenetic analysis of the Asian endemic freshwater sleepers (Gobiiformes: Odontobutidae)

Molecular Phylogenetics and Evolution

DOI

2017

Multilocus DNA barcoding – Species Identification with Multilocus Data

Scientific Reports

DOI

2017

Species delimitation and phylogenetic reconstruction of the sinipercids (Perciformes: Sinipercidae) based on target enrichment of thousands of nuclear coding sequences

Molecular Phylogenetics and Evolution

DOI

2017

Historical introgression drives pervasive mitochondrial admixture between two species of pelagic sharks

Molecular Phylogenetics and Evolution

DOI

2016

Target gene enrichment in the cyclophyllidean cestodes, the most diverse group of tapeworms

Molecular Ecology Resources，Vol. 160, No. 50

DOI

2016

福尔马林固定匙吻鲟样本线粒体基因组的测定

《上海海洋大学学报》

2016

奇妙的鱼类世界新生研讨课探索与实践

《教育教学论坛》

2016

Population genomics of C. melanopterus using target gene capture data: demographic inferences and conservation perspectives

Scientific Reports

DOI

2016

Population structure of elongate ilisha Ilisha elongata along the Northwestern Pacific Coast revealed by mitochondrial control region sequences

Fisheries Science

DOI

2015

First mitochondrial genome for the red crab (Charybdis feriata) with implication of phylogenomics and population genetics

Scientific Reports

DOI

2015

DNA capture reveals transoceanic gene flow in endangered river sharks

Proceedings of the National Academy of Sciences

DOI

2015

Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks

BMC Evolutionary Biology

DOI

2015

Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks

Flanders Marine Institute (Flanders Marine Institute)

DOI

2014

On the occurrence of the Southern Lanternshark, Etmopterus granulosus , off South Africa, with comments on the validity of E. compagnoi

Deep Sea Research Part II Topical Studies in Oceanography

DOI

2013

Addressing Gene Tree Discordance and Non-Stationarity to Resolve a Multi-Locus Phylogeny of the Flatfishes (Teleostei: Pleuronectiformes)

Systematic Biology

DOI

2013

A DNA sequence-based identification checklist for Taiwanese chondrichthyans

Zootaxa

DOI

2013

Exon-primed intron-crossing (EPIC) markers as a tool for ant phylogeography

Revista Brasileira de Entomologia

DOI

2013

Exon‐primed intron‐crossing (EPIC) markers for evolutionary studies of Ficus and other taxa in the fig family (Moraceae)

Applications in Plant Sciences

DOI

2013

Capturing Protein-Coding Genes Across Highly Divergent Species

BioTechniques

DOI

2013

The Tree of Life and a New Classification of Bony Fishes

PLoS Currents

DOI

2013

Multi-locus phylogenetic analysis reveals the pattern and tempo of bony fish evolution

PLoS Currents

DOI

2012

EvolMarkers: a database for mining exon and intron markers for evolution, ecology and conservation studies

Molecular Ecology Resources，Vol. 120, No. 50

DOI

2008

Mitochondrial DNA-inferred population structure and demographic history of the mitten crab (Eriocheir sensu stricto) found along the coast of mainland China

Molecular Ecology，Vol. 170, No. 150

DOI

2002

池养长江蟹、辽河蟹生长性能及其遗传环境交互作用分析

《水生生物学报》

2001

三水系中华绒螯蟹幼蟹形态判别程序的建立和使用

《水产学报》

2001

池塘放养中华绒螯蟹长江种群与辽河种群性早熟出现差异的观察与分析

《湖泊科学》

2000

阳澄湖中华绒螯蟹品质分析

《中国水产科学》

2000

不同亲本组合尼奥杂交鱼子代雄性率、生长率及早期成活率的研究

《水产科技情报》

1999

中国大陆沿海六水系绒螯蟹(中华绒螯蟹和日本绒螯蟹)群体亲缘关系:形态判别分析

《水产学报》

1998

中华绒螯蟹性早熟的早期判别

《水产科技情报》

1998

尼罗罗非鱼五品系生长性能评估

《水产学报》

1997

华东地区中华鳖地方群体形态差异初步研究

《中国水产科学》

1997

华东地区中华鳖地方群体mtDNA多态分析

《中国水产科学》

1997

尼罗罗非鱼吉富品系养殖推广中试研究

《水产科技情报》

1997

吉富等品系尼罗罗非鱼的起捕率差异

《水产科技情报》

1996

不同品系尼罗罗非鱼致死低温的研究

《水产科技情报》

2017

鳜属鱼类的进化和遗传多样性研究

《2017年中国水产学会学术年会》

2012

馆藏173年的模式标本的线粒体基因组测序—露齿鲨属(Glyphis)的系统分类学研究

《中国海洋湖沼学会鱼类学分会、中国动物学会鱼类学分会2012年学术研讨会》

2025

A novel data filtering method resolves the controversy in the phylogeny of the Chondrichthyes

bioRxiv (Cold Spring Harbor Laboratory)

DOI

2025

Stochastic Assembly Drives Community Structure Over Environmental Filtering in a Fragmented Floodplain Lake: Multi-Scale Evidence from eDNA and Hydroacoustic Data

DOI

2024

New insights into the population structure of the small yellow croaker (Larimichthys polyactis) in the Yellow and East China Seas based on single-nucleotide polymorphisms, with implications for fishery management

DOI

2023

Detecting the Yangtze River Sturgeon (Acipenser Dabryanus) Based on Recombinase Polymerase Amplification and Lateral Flow Strips (RPA-LFD)

SSRN Electronic Journal

DOI

2026

Microdous amblyrhynchos sp. nov., a new member of the small-toothed sleepers (Teleostei, Gobiiformes, Odontobutidae) from Guangxi, southern China

Global Biodiversity Information Facility

DOI