Wei Liu, Yan-Ru Qin, Qiu Zhong, Jun Wang, Jiayi Li, Ruina Zhang, Yan Zhou, Yuanyuan Zhao, Hongzhi Shi (2026). Integrated multi-omics analysis of microbial communities and volatile aroma components during cigar tobacco fermentation. Chemical and Biological Technologies in Agriculture.DOI
Wei Liu, Yuanyuan Zhao, Tianye Zhou, Meng-Ge Bai, Jun Wang, Caining Qi, Jiayi Li, Yan-Ru Qin, Hongzhi Shi (2026). Mechanisms for reducing cigar tobacco leaf irritancy during acidic fermentation. AMB Express.DOI
Wei Liu, Meng-Ge Bai, Yan-Ru Qin, Tian Zhou, Qiu Zhong, Jun Wang, Yuanyuan Zhao, Hongzhi Shi (2026). Compound enzyme and low-oxygen co-fermentation improves aroma quality and reduces irritation of cigar tobacco leaves. Industrial crops and products (Print).DOI
Meng-Juan Ren, Yuanyuan Zhao, T. Zhou, Ruina Zhang, Jiayi Li, Lanyue Zhang, Yan-Ru Qin, Hongzhi Shi (2025). Integrated 16S rDNA, UPLC-MS, and GC-MS analyses to investigate the effects of roasted-rice leachate fermentation on flavor formation in cigar tobacco leaves. Food Bioscience.DOI
Hejun Liu, Xin Fang, Shi-Ping Guo, Bo Zhang, Chong-De Wu, Qiu Zhong, Ruina Zhang, Hongzhi Shi, Yan-Ru Qin, Shu-Hua Zeng, Yao Jin (2025). Isolation and evaluation of a Bacillus altitudinis strain to improve cigar tobacco leaves fermentation. Frontiers in Bioengineering and Biotechnology.DOI
Wei Liu, Xiaolong Chen, Yuanyuan Zhao, Hongzhi Shi (2025). Effects of green manuring on chemical characteristics and microecology of tobacco-growing soil in central henan. BMC Microbiology.DOI
Xin Fang, Yan-Ru Qin, Tiantian Liu, Shiping Guo, Chong-De Wu, Ruina Zhang, Qiu Zhong, Yun-Kang Lei, Hongzhi Shi, Rong-Qing Zhou, Shu-Hua Zeng, Yao Jin (2024). Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation. Applied Microbiology and Biotechnology.DOI
Mengyue Zhang, Chunting Yang, Lingling Gao, Yuanyuan Zhao, Hongzhi Shi (2024). Response of human metabolism to ultra-low and high nicotine cigarettes based on urine metabolomics and bioinformatic analysis. Tobacco Induced Diseases.DOI
Yuqing Feng, Yuanyuan Zhao, Yanjun Ma, Xiaolong Chen, Hongzhi Shi (2024). Integrative physiological and transcriptome analysis unravels the mechanism of low nitrogen use efficiency in burley tobacco. Plant Direct.DOI
Mengjuan Ren, Yanqing Qin, Yuanyuan Zhao, Bingfeng Zhang, Ruina Zhang, Hongzhi Shi (2024). Effects of microbes and metabolites on tobacco quality in “Humi” characteristic fermentation of cigar tobacco leaf. Process Biochemistry.DOI
Tingting Wang, Yuanyuan Zhao, Dexun Wang, Hongzhi Shi (2024). Transcriptome analysis reveals the mechanism of NaHCO3 promoting tobacco leaf maturation. Open Life Sciences.DOI
Yuqing Feng, Yuanyuan Zhao, Yanjun Ma, Deshui Liu, Hongzhi Shi (2023). Single‐cell transcriptome analyses reveal cellular and molecular responses to low nitrogen in burley tobacco leaves. Physiologia Plantarum.DOI
Mengjuan Ren, Yanqing Qin, Lanyue Zhang, Yuanyuan Zhao, Ruina Zhang, Hongzhi Shi (2023). Effects of fermentation chamber temperature on microbes and quality of cigar wrapper tobacco leaves. Applied Microbiology and Biotechnology.DOI
Yuqing Feng, Yujing Li, Yuanyuan Zhao, Hongzhi Shi (2023). Physiological, transcriptome and co-expression network analysis of chlorophyll-deficient mutants in flue-cured tobacco. BMC Plant Biology.DOI
Mengyue Zhang, Yuanyuan Zhao, Hongzhi Shi (2023). Comparative transcriptome analysis of conventionally cultivated tobacco and tobacco grafted to eggplant. Agronomy Journal.DOI
Mengyue Zhang, Yuanyuan Zhao, Hongzhi Shi (2023). Topping and grafting affect the alkaloid content and gene expression patterns of tobacco ( Nicotiana tabacum L.). Plant Direct.DOI
Huanhuan Wang, Rui Zhang, Yuanyuan Zhao, Hongzhi Shi, Guoshun Liu (2022). Effect of Biochar on Rhizosphere Soil Microbial Diversity and Metabolism in Tobacco-Growing Soil. Ecologies.DOI
Tiantian Liu, Shiping Guo, Chongde Wu, Ruina Zhang, Qiu Zhong, Hongzhi Shi, Rongqing Zhou, Yanqing Qin, Yao Jin (2022). Phyllosphere microbial community of cigar tobacco and its corresponding metabolites. Frontiers in Microbiology.DOI
Tianbao Ren, Huanhuan Wang, Ye Yuan, Huilin Feng, Bo Wang, Gang Kuang, Yuewei Wei, Weikai Gao, Shi Hongzhi, Guoshun Liu (2021). Biochar increases tobacco yield by promoting root growth based on a three-year field application. Scientific Reports.DOI
Yafei Li, Dong Chang, Xiang Zhang, Shi Hongzhi, Huijuan Yang (2021). RNA-Seq, physiological, and biochemical analysis of burley tobacco response to nitrogen deficiency. Scientific Reports.DOI
Huanhuan Wang, Tianbao Ren, Yuqing Feng, Kouzhu Liu, Huilin Feng, Guoshun Liu, Hongzhi Shi (2020). RETRACTED: Effects of the Application of Biochar in Four Typical Agricultural Soils in China. Agronomy.DOI
Huijuan Yang, Xinqi Geng, Shimin Zhao, Hongzhi Shi (2020). Genomic diversity analysis and identification of novel SSR markers in four tobacco varieties by high-throughput resequencing. Plant Physiology and Biochemistry.DOI
Jingjing Li, Yuanyuan Zhao, Yanqing Qin, Shi Hongzhi (2020). Influence of microbiota and metabolites on the quality of tobacco during fermentation. BMC Microbiology.DOI
Huanhuan Wang, Tianbao Ren, Yuqing Feng, Kouzhu Liu, Huilin Feng, Guoshun Liu, Shi Hongzhi (2020). RETRACTED: Wang et al. Effects of the Application of Biochar in Four Typical Agricultural Soils in China. Agronomy 2020, 10, 351. Agronomy.DOI
Huanhuan Wang, Tianbao Ren, Karin Müller, Lukas VAN ZWIETEN, Hailong Wang, Huilin Feng, Chensheng Xu, Fei Yun, Xiaoming Ji, Quanyu Yin, Shi Hongzhi, Guoshun Liu (2020). Soil type regulates carbon and nitrogen stoichiometry and mineralization following biochar or nitrogen addition. The Science of The Total Environment.DOI
Yafei Li, Dong Chang, Huijuan Yang, Jing Wang, Shi Hongzhi (2018). Metabolome and molecular basis for carbohydrate increase and nitrate reduction in burley tobacco seedlings by glycerol through upregulating carbon and nitrogen metabolism. Scientific Reports.DOI
Huijuan Yang, Li Zhao, Shimin Zhao, Jing Wang, Hongzhi Shi (2017). Biochemical and transcriptomic analyses of drought stress responses of LY1306 tobacco strain. Scientific Reports.DOI
Huijuan Yang, Jing Wang, Li Zhao, Yan Zhou, Hongzhi Shi (2017). RNA-sequencing predicts three novel genes in response to drought in electron beam irradiation treated tobacco. Acta Physiologiae Plantarum.DOI
WANG Jun, ZHANG Mengyue, Shi Hongzhi (2017). Effect of storage environment on nitrogen oxides formation in leaves of tobacco of different types. DOAJ (DOAJ: Directory of Open Access Journals).DOI
Jun Wang, Huijuan Yang, Shi Hongzhi, Jun Zhou, Ruoshi Bai, Mengyue Zhang, Tong Jin (2017). Nitrate and Nitrite Promote Formation of Tobacco-Specific Nitrosamines via Nitrogen Oxides Intermediates during Postcured Storage under Warm Temperature. Journal of Chemistry.DOI
Yafei Li, Shi Hongzhi, Huijuan Yang, Jun Zhou, Jing Wang, Ruoshi Bai, Xu Dongya (2017). Difference between Burley Tobacco and Flue-Cured Tobacco in Nitrate Accumulation and Chemical Regulation of Nitrate and TSNA Contents. Journal of Chemistry.DOI
Huijuan Yang, Fei Su, Jing Wang, Hongzhi Shi (2016). Comparative shotgun proteomic profiles for identification of differentially expressed proteins in response to topping in Nicotiana tabacum leaves. Acta Physiologiae Plantarum.DOI
Shi Hongzhi, Ruiyun Wang, Lowell Palmer Bush, Jun Zhou, Huijuan Yang, Neil Fannin, Ruoshi Bai (2013). Changes in TSNA Contents during Tobacco Storage and the Effect of Temperature and Nitrate Level on TSNA Formation. Journal of Agricultural and Food Chemistry.DOI
Huijuan Yang, Li Xu, Hong Cui, Boxiong Zhong, Guoshun Liu, Hongzhi Shi (2012). Low nitrogen-induced expression of cyclophilin in Nicotiana tabacum. Journal of Plant Research.DOI
Hongzhi Shi (2012). Comparison of contents of free and glycosidic neutral aroma components in four different tobacco types. He'nan nongye daxue xuebao.
Yuqing Feng, Yuan-Yuan Zhao, Yafei Li, Jun Jie Zhou, Hongzhi Shi (2021). Improving Drought Tolerance in Tobacco By Application of Salicylic Acid. Research Square.DOI
Yuqing Feng, Yuanyuan Zhao, Yafei Li, Jun Jie Zhou, Yujing Li, Shi Hongzhi (2021). Physiological and Transcriptome Analysis Reveals the Differences in Nitrate Content Between Lamina and Midrib of Flue-Cured Tobacco. Research Square.DOI