杨龙｜山东农业大学｜学者主页

2026

Straw incorporation and nitrogen fertilisation are associated with improved tobacco yield and distinct soil ecological responses in a wheat–tobacco rotation system

Guang-Chao Cui, Lei Tian, Ze-Xiang Huang, Ming-Ming Sun, Ming-Feng Yang, You-Qing Dai, Li-Xiang Liu, Li-Li Wang, Long Yang, Li Zhang

Agriculture, Ecosystems & Environment. Applied Soil Ecology

DOI

2026

Integrative transcriptomic and metabolomic analysis reveals variety-specific metabolic divergence and regulatory networks in fresh leaves of flue-cured tobacco

Tong-Qing Wu, Haozhen Li, Ming-Feng Yang, Shuai Zhang, You-Qing Dai, Jia-Xin Liu, Long Yang, Ying-Hui Xie, Ming-Ming Sun, Li Zhang

Scientific Reports

DOI

2026

Genome-Wide Analysis and Characterization of CYP450 Gene Family in Tobacco (Nicotiana tabacum L)

Yunfei Sha, Senwen Yu, Zhenbo Cai, Zhe Zhang, Kangkang Song, Long Yang, Xia Shao

Plant Molecular Biology Reporter

DOI

2026

Sub-micrometer oyster shell powder mitigates cadmium phytotoxicity through soil and root barrier reinforcement

Yusong Zhou, Kaida Wang, Mengyu Bi, Qain Tong, Zhiguo Liu, Li Zhang, Peng Liu, Jason Christopher White, Long Yang

Journal of Hazardous Materials

DOI

2025

Microbial fertilizers modulate tobacco growth and development through reshaping soil microbiome and metabolome

Xiao-Yu Wang, Ming-Ming Sun, Lei Tian, Ming-Feng Yang, Qiang Gao, Li-Li Wang, Hong-Hao Yan, Long Yang, Xin Hou, Peng Liu, Li Zhang

Microbiology spectrum

DOI

2025

Rotation-driven changes in physicochemical properties modulate soil microbial diversity and community complexity in tobacco-woad soils

Zhong-Yan Wang, Xiaomeng Guo, Hong-Feng Zhang, Tongyan Zheng, Yun-Xia Liu, Lu-Ping Dai, Yi Xie, Xian-chao Shang, Li Zhang, Long Yang, Ling Yuan, Xin Hou

Microbiology spectrum

DOI

2025

PscOA: a plant scRNA-seq marker gene database for enhanced cellular transcriptome understanding

Xu He, Bin Li, Xiao‐Hua Zhang, Haozhen Li, Kangkang Song, Modsarajah Rajendran, Hengchun Cao, Long Yang

Plant and Cell Physiology

DOI

2025

Genome-Wide Identification of NBS-LRR Family in Three Nicotiana Genomes and Their Expression During Disease Resistance

Ying Liu, Wenjing Liu, Haozhe Huang, Caixia Zhang, Long Yang

Genes

DOI

2025

Integrated untargeted and targeted metabolomics and microbiome profiling reveal the effects of storage duration on the flavor quality of Rizhao Jinhua white tea

Haozhen Li, Kangkang Song, Xiaohua Zhang, Shuyao Wang, Long Yang

Food Chemistry

DOI

2025

Aroma formation in jasmine tea: insights from metabolomics and microbial community analyses during multiple scenting processes

Haozhen Li, Kangkang Song, Xiaohua Zhang, Jian Hou, Long Yang

LWT

DOI

2025

Abscisic acid-mediated lignin biosynthesis and cell wall reinforcement confer cadmium tolerance in Nicotiana alata

Zhiguo Liu, Jiawen Pan, Wen Li, Minmin Wang, Jiyuan Yan, Jingrui Chen, Peng Liu, Long Yang

Industrial Crops and Products

DOI

2025

Integrated Physiological, Transcriptomic, and Metabolomic Analyses Reveal the Response Mechanisms of Selenium (Se) and Boron (B) Under Lead (Pb) Stress in Tobacco

Lingling Jin, Qian Qiao, Long Yang, Yun Li Gao

Plant Cell & Environment

DOI

2025

NMOD: a multi-dimensional omics database for disease resistance research in Nicotiana

Xu He, Yanru Song, Bin Li, Kangkang Song, Xiao‐Hua Zhang, Wenna Zheng, Bin Tan, Long Yang

Plant and Cell Physiology

DOI

2025

Polysaccharides from Ulva prolifera promote tobacco plant growth by benefiting rhizosphere bacterial community in acidic soil

Li-ping Zhao, Ying Xiong, Peng Zhang, Mingming Sun, Long Yang, Xianchao Shang, Tao Yu

Industrial Crops and Products

DOI

2025

Unraveling the synergistic role of ABA and ethylene in root lignin synthesis: A key molecular mechanism for tobacco response to PS-NPs using multi-omics approaches

Tao Jia, Xiaodong Sun, Wenwen Li, Jingrui Chen, Willie J.G.M. Peijnenburg, Peng Liu, Long Yang

Industrial Crops and Products

DOI

2025

Population Genomics Provides Insights Into Genomic Features of Inbreeding Depression in Arma Chinensis

Bin Li, Kangkang Song, Zixian Wu, Xiaohua Zhang, Haozhen Li, Long Yang

Evolutionary Applications

DOI

2025

Revealing novel insights into the improvement of greenhouse tea quality through exogenous substance interventions using targeted and untargeted metabolomics and microbial community analyses

Haozhen Li, Shuyao Wang, Xiaohua Zhang, Kangkang Song, Long Yang

Food Chemistry X

DOI

2025

Toll/interleukin-1 receptor-only genes contribute to immune responses in maize

Qiang Zhang, Derong Gao, Lei Tian, Kirstin Feussner, Bin Li, Long Yang, Qin Yang, Yuelin Zhang, Xin Li, Ivo Feußner, Fang Xu

PLANT PHYSIOLOGY

DOI

2025

Transport Dynamics and Physiological Responses of Polystyrene Nanoplastics in Pakchoi: Implications for Food Safety and Environmental Health

Zhiguo Liu, Mengzhan Qin, Runze Li, Willie J.G.M. Peijnenburg, Long Yang, Peng Liu, Qinghua Shi

Journal of Agricultural and Food Chemistry

DOI

2025

Whole genome re-sequencing in 437 tobacco germplasms identifies plant height candidate genes

Yanru Song, Yuanheng Wang, Ying Liu, Haozhen Li, Jie Ding, Xingfu Wu, Yongping Li, Fangchan Jiao, Long Yang

Scientific Reports

DOI

2024

Effect of potassium fulvate on continuous tobacco cropping soils and crop growth

Yingle Jiao, Qian Chen, Xiaomeng Guo, Hongliang Li, Xuwei Chen, Kui-Fu Men, Xiao-Chen Liu, Xian-chao Shang, Yun Gao, Li Zhang, Long Yang, Xin Hou

Frontiers in Plant Science

DOI

2024

Tobacco/Isatis intercropping system improves soil quality and increase total production value

Zhong-Yan Wang, Xiaomeng Guo, Shou-Tao Cao, Ming-Feng Yang, Qiang Gao, Hao Zong, Xian-chao Shang, Yun Gao, Li Zhang, Long Yang, Miao Zhang, Ming-Ming Sun, Xin Hou

Frontiers in Plant Science

DOI

2024

Isolation, identification, and mechanism analysis of plant growth-promoting rhizobacteria in tobacco

Chuandong Jiang, Fuyu Peng, Li Zhang, Yu-Qin Zhang, Jie Wang, Junmin Li, Bing-Hui Cui, Chang-Dai Cao, Cheng-Qiang Wang, Yu-jing Qin, Ran Wang, Zongpeng Zhao, Jia-Zhu Jiang, Ming-Feng Yang, Ming-Ming Sun, Long Yang, Qiang Zhang

Frontiers in Microbiology

DOI

2024

Exogenous Eugenol Alleviates Salt Stress in Tobacco Seedlings by Regulating the Antioxidant System and Hormone Signaling

Jiaxin Xu, Tingting Wang, Xiaoyu Wang, Honghao Yan, Peng Liu, Xin Hou, Yun Gao, Long Yang, Li Zhang

International Journal of Molecular Sciences

DOI

2024

The Characterization of G-Quadruplexes in Tobacco Genome and Their Function under Abiotic Stress

Kangkang Song, Bin Li, Haozhen Li, Rui Zhang, Xiaohua Zhang, Ruiwei Luan, Ying Liu, Long Yang

International Journal of Molecular Sciences

DOI

2024

Progress in Microbial Fertilizer Regulation of Crop Growth and Soil Remediation Research

Tingting Wang, Jiaxin Xu, Jian Chen, Peng Liu, Xin Hou, Long Yang, Li Zhang

Plants

DOI

2024

Eugenol improves salt tolerance via enhancing antioxidant capacity and regulating ionic balance in tobacco seedlings

Jiaxin Xu, Tingting Wang, Changwei Sun, Peng Liu, Jian Chen, Xin Hou, Tao Yu, Yun Gao, Zhiguo Liu, Long Yang, Li Zhang

Frontiers in Plant Science

DOI

2024

Integrated Transcriptomics and Metabolomics Analysis Promotes the Understanding of Adventitious Root Formation in Eucommia ulmoides Oliver

Qingxin Du, Kangkang Song, Lu Wang, Lanying Du, Hongyan Du, Bin Li, Haozhen Li, Long Yang, Yan Wang, Panfeng Liu

Plants

DOI

2024

Transcriptional, physiological and ultrastructure levels revealed silicon enhanced cadmium detoxification and functional compound accumulation in pakchoi

Zhiguo Liu, Mengzhan Qin, Runze Li, Yusong Zhou, Jiyuan Yan, Parvaiz Ahmad, Mohamed A. El‐Sheikh, Long Yang, Peng Liu, Qinghua Shi

LWT

DOI

2024

Microbial Community Shifts in Tea Plant Rhizosphere under Seawater Stress: Enrichment of Beneficial Taxa

Xiao‐Hua Zhang, Haozhen Li, Bin Li, Kangkang Song, Yuxue Sha, Ying Liu, Shaolin Dong, Di Wang, Long Yang

Microorganisms

DOI

2024

Aquaporin mediated silicon-enhanced root hydraulic conductance is benefit to cadmium dilution in tobacco seedlings

Zhiguo Liu, Zhiguo Liu, Lei Hou, Jiyuan Yan, Parvaiz Ahmad, Mengzhan Qin, Runze Li, Mohamed A. El‐Sheikh, Rupesh Kailasrao Deshmukh, Sreeja S. Sudhakaran, Basharat Ali, Long Yang, Long Yang, Peng Liu

Journal of Hazardous Materials

DOI

2024

Expression patterns and evidence of the expansion of Nicotiana tabacum L. TALE genes in the Solanaceae family

Yanru Song, Decai Kong, Youqing Dai, Kangkang Song, Bin Li, Jiazhu Jiang, Chunyan Xiao, Long Yang

Genetic Resources and Crop Evolution

DOI

2024

Recovery of Cembratrien-Diols from Waste Tobacco (Nicotiana tabacum L.) Flowers by Microwave-Assisted Deep Eutectic Solvent Extraction: Optimization, Separation, and In Vitro Bioactivity

Tao Yu, Long Yang, Xianchao Shang, Shiquan Bian

Molecules

DOI

2024

Tobacco/Salvia miltiorrhiza Intercropping Improves Soil Quality and Increases Total Production Value

Xueqi Su, Xiaomeng Guo, Qian Chen, Zheng Sun, Xianchao Shang, Yun Li Gao, Tao Yu, Li Zhang, Long Yang, Xin Hou

Agronomy

DOI

2024

Genome-wide identification and expression analysis of NF-Y gene family in tobacco (Nicotiana tabacum L.)

Yue Tian, Kangkang Song, Bin Li, Yanru Song, Xiaohua Zhang, Haozhen Li, Long Yang

Scientific Reports

DOI

2024

Genome-wide identification of hormone biosynthetic and metabolism genes in the 2OGD family of tobacco and JOX genes silencing enhances drought tolerance in plants

Rui Zhang, Xinyi Chen, Yi Wang, Xiaozhou Hu, Qingquan Zhu, Long Yang, Ming Zhou

International Journal of Biological Macromolecules

DOI

2023

The application of plant growth-promoting rhizobacteria enhances the tolerance of tobacco seedling to salt stress.

Xian-chao Shang, Liu Hui, Jianlong Zhang, Z. Hao, Changdai Cao, H. Le, Weimin Zhang, Long Yang, Yun Gao, Xin Hou

Ecotoxicology and Environmental Safety

DOI

2023

Polyploid Genome Assembly Provides Insights into Morphological Development and Ascorbic Acid Accumulation of Sauropus androgynus

Fagang Xia, Bin Li, Kangkang Song, Yankun Wang, Zhuangwei Hou, Haozhen Li, Xiao‐Hua Zhang, Fangping Li, Long Yang

International Journal of Molecular Sciences

DOI

2023

CRISPR/Cas9 Editing Sites Identification and Multi-Elements Association Analysis in Camellia sinensis

Haozhen Li, Kangkang Song, Bin Li, Xiao‐Hua Zhang, Di Wang, Shaolin Dong, Long Yang

International Journal of Molecular Sciences

DOI

2023

Application of Multi-Perspectives in Tea Breeding and the Main Directions

Haozhen Li, Kangkang Song, Xiaohua Zhang, Di Wang, Shaolin Dong, Ying Liu, Long Yang

International Journal of Molecular Sciences

DOI

2023

Autotoxins in continuous tobacco cropping soils and their management

Yudong Chen, Long Yang, Lumin Zhang, Jiànróng Lǐ, Yalin Zheng, Wenwu Yang, Lele Deng, Qian Gao, Qi-Li Mi, Xuemei Li, Wanli Zeng, Xinhua Ding, Haiying Xiang

Frontiers in Plant Science

DOI

2023

The chromosome-level genome of Eucommia ulmoides provides insights into sex differentiation and α-linolenic acid biosynthesis

Qingxin Du, Zixian Wu, Panfeng Liu, Jun Qing, Feng He, Lanying Du, Zhiqiang Sun, Lili Zhu, Hongchu Zheng, Zongyi Sun, Long Yang, Lu Wang, Hongyan Du

Frontiers in Plant Science

DOI

2023

RNA-seq for comparative transcript profiling in leaves of strawberry seedlings under salinity stress

Rui Zhang, Qiuli Du, Wenzhe Zhao, Long Yang, Dongmei Li, Xiude Chen, Wei Xiao, Xiling Fu, Yang Chao, Ling Li

Plant Biotechnology Reports

DOI

2023

Bacterial dynamic of flue-cured tobacco leaf surface caused by change of environmental conditions

Jie Ding, Kesu Wei, Xianchao Shang, Yuxue Sha, Liting Qin, Haozhen Li, Di Wang, Xiao‐Hua Zhang, Shengjiang Wu, Delun Li, Feng Wang, Long Yang

Frontiers in Microbiology

DOI

2023

Plant Growth-Promoting Rhizobacteria Microbial Fertilizer Changes Soils’ Microbial Structure and Promotes Healthy Growth of Cigar Tobacco Plants

Xianchao Shang, Sha Fu, Xiaomeng Guo, Zheng Sun, Fangyu Liu, Qian Chen, Tao Yu, Yun Li Gao, Li Zhang, Long Yang, Xin Hou

Agronomy

DOI

2023

Analysis of transcriptomic and metabolomic differences revealed the mechanism underlying the tobacco response to low-temperature

Yun Gao, Qian Qiao, Zhongqing Liu, Zhengxu Gao, Dequan Wang, Chunju Liu, Yuanxiao Xi, Min Fang, Hua Yu, Li Zhang, Tao Yu, Long Yang

Environmental and Experimental Botany

DOI

2023

Transcriptome analysis revealed enrichment pathways and regulation of gene expression associated with somatic embryogenesis in Camellia sinensis

Haozhen Li, Hui Wu, Kang-Kang Song, Huihui Zhao, Xiaoyan Tang, Xiao‐Hua Zhang, Di Wang, Shaolin Dong, Feng Liu, Jun Wang, Zhong-Cong Li, Long Yang, Xiang Qin-zeng

Scientific Reports

DOI

2023

Application progress of CRISPR/Cas9 genome-editing technology in edible fungi

Yan Zhang, Shutong Chen, Long Yang, Qıang Zhang

Frontiers in Microbiology

DOI

2023

Metabolites and microbial characteristics of Fu brick tea after natural fermentation

Hui Wu, Huihui Zhao, Jie Ding, Yuanheng Wang, Jian Ling Hou, Long Yang

LWT

DOI

2023

Prediction of global potential suitable habitats of Nicotiana alata Link et Otto based on MaxEnt model

Yan-Fang Zhang, Shutong Chen, Yun Gao, Long Yang, Hua Yu

Scientific Reports

DOI

2023

Identification and Analysis of the Catalase Gene Family Response to Abiotic Stress in Nicotiana tabacum L.

Zhonghui Liu, Di Wang, Heng Tang, Haozhen Li, Xiao‐Hua Zhang, Shaolin Dong, Li Zhang, Long Yang

Agronomy

DOI

2023

Multi-factor correlation analysis of the effect of root-promoting practices on tobacco rhizosphere microecology in growth stages

Juxu Li, Qian Zhang, Man Li, Xiaojie Yang, Jie Ding, Jinhui Huang, Pengwei Yao, Xiaoquan Zhang, Xueli Li, Long Yang

Microbiological Research

DOI

2023

Effects of cadmium on transcription, physiology, and ultrastructure of two tobacco cultivars

Zhiguo Liu, Xiuzhe Wu, Lei Hou, Shengzhe Ji, Yao Zhang, Weiru Fan, Tong Li, Li Zhang, Peng Liu, Long Yang

The Science of The Total Environment

DOI

2022

The Function of BBX Gene Family under Multiple Stresses in Nicotiana tabacum

Kangkang Song, Bin Li, Hui Wu, Yuxue Sha, Liting Qin, Xingyun Chen, Ying Liu, Heng Tang, Long Yang

Genes

DOI

2022

Genome-wide identification and expression analyses of late embryogenesis abundant (LEA) gene family in tobacco (Nicotiana tabacum L.) reveal their function in abiotic stress responses

Weibo Geng, Yanan Wang, Jıng Zhang, Zhonghui Liu, Xingyun Chen, Liting Qin, Long Yang, Heng Tang

Gene

DOI

2022

Evolutions and Managements of Soil Microbial Community Structure Drove by Continuous Cropping

Yudong Chen, Jianfeng Du, Yang Li, Heng Tang, Ziyi Yin, Long Yang, Xinhua Ding

Frontiers in Microbiology

DOI

2022

NRD: Nicotiana Resistance Database, a Comprehensive Platform of Stress Tolerance in Nicotiana

Yudong Chen, Shuai Yang, Jiaxuan Li, Kesu Wei, Long Yang

Agronomy

DOI

2022

PlantGF: an analysis and annotation platform for plant gene families

Jiaxuan Li, Shuai Yang, Xiaojie Yang, Hui Wu, Heng Tang, Long Yang

Database

DOI

2021

Important Roles of Key Genes and Transcription Factors in Flower Color Differences of Nicotiana alata

Yalin Zheng, Yudong Chen, Zhiguo Liu, Hui Wu, Fangchan Jiao, Haiping Xin, Li Zhang, Long Yang

Genes

DOI

2021

Transcriptome and Metabolome Analysis Revealed the Freezing Resistance Mechanism in 60-Year-Old Overwintering Camellia sinensis

Hui Wu, Zixian Wu, Yuanheng Wang, Jie Ding, Yalin Zheng, Heng Tang, Long Yang

Biology

DOI

2021

Transcriptional regulation and functional analysis of Nicotiana tabacum under salt and ABA stress

Hui Wu, Huayang Li, Wenhui Zhang, Heng Tang, Long Yang

Biochemical and Biophysical Research Communications

DOI

2021

PID: An integrative and comprehensive platform of plant intron

Ying Gao, Fangfang Ge, Rui Zhang, Deyou Yin, Ying Zhao, Heng Tang, Li Zhang, Long Yang

Computational Biology and Chemistry

DOI

2020

ABA signaling pathway genes and function during abiotic stress and berry ripening in Vitis vinifera

Rui Zhang, Yi Wang, Shaohua Li, Long Yang, Zhenchang Liang

Gene

DOI

2020

Short Tandem Repeats in plants: Genomic distribution and function prediction

Lin Fu Zhu, Hui Wu, Huayang Li, Heng Tang, Li Zhang, Houjuan Xu, Fangchan Jiao, Nian Wang, Long Yang

Electronic Journal of Biotechnology

DOI

2020

Systematic Analysis of REBASE Identifies Numerous Type I Restriction-Modification Systems with Duplicated, Distinct hsdS Specificity Genes That Can Switch System Specificity by Recombination

John M. Atack, Chengying Guo, Thomas Litfin, Long Yang, Patrick Joseph Blackall, Yaoqi Zhou, Michael P. Jennings

mSystems

DOI

2019

基于FUNGuild的镰刀菌根腐病发病烟株根际真菌群落研究

李朋发，杨龙，李桂龙，徐后娟，王玉军，李忠佩

《中国烟草学报》

DOI

2019

Genome-Wide Identification and Analysis of the NPR1-Like Gene Family in Bread Wheat and Its Relatives

Xian Liu, Zhiguo Liu, Xinhui Niu, Qian Ya Xu, Long Yang

International Journal of Molecular Sciences

DOI

2019

Genome-Wide Identification and Characterization of Xyloglucan Endotransglycosylase/Hydrolase in Ananas comosus during Development

Qingyun Li, Huayang Li, Chongyang Yin, Xiaotong Wang, Qingwu Jiang, Rui Zhang, Fangfang Ge, Yudong Chen, Long Yang

Genes

DOI

2019

Proteomic variation in Vitis amurensis and V. vinifera buds during cold acclimation

Valerie F. Masocha, Qingyun Li, Zhenfei Zhu, Fengmei Chai, Xiaoming Sun, Zemin Wang, Long Yang, Qingfeng Wang, Haiping Xin

Scientia Horticulturae

DOI

2019

DNA sequence repeats identify numerous Type I restriction‐modification systems that are potential epigenetic regulators controlling phase‐variable regulons; phasevarions

John M. Atack, Chengying Guo, Long Yang, Yaoqi Zhou, Michael P. Jennings

The FASEB Journal

DOI

2019

Genome-wide identification and expression analysis of the dof (DNA binding with one finger) protein family in monocot and dicot species

Shuai Wang, Yaping Bai, Pinghua Li, Long Yang, Xianglan Wang

Physiological and Molecular Plant Pathology

DOI

2019

The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge)

Qiang Liang, Huayang Li, Shouke Li, Fuling Yuan, Jingfeng Sun, Qicheng Duan, Qingyun Li, Rui Zhang, Ya Lin Sang, Nian Wang, Xiangwen Hou, Ke Yang, Jian Ning Liu, Long Yang

GigaScience

DOI

2019

Plant-GQ: An Integrative Database of G-Quadruplex in Plant

Fangfang Ge, Yi Wang, Huayang Li, Rui Zhang, Xiaotong Wang, Qingyun Li, Zhenchang Liang, Long Yang

Journal of Computational Biology

DOI

2019

Effects of tillage managements and maize straw returning on soil microbiome using 16S rDNA sequencing

Xinyao Xia, Piaopiao Zhang, Linlin He, Xingxing Gao, Weijun Li, Yuanyuan Zhou, Zongxin Li, Hui Li, Long Yang

Journal of Integrative Plant Biology

DOI

2019

Genome-wide identification and expression analysis of HKT transcription factor under salt stress in nine plant species

Huayang Li, Guangzhao Xu, Chao Yang, Long Yang, Zhenchang Liang

Ecotoxicology and Environmental Safety

DOI

2019

PCIR: a database of Plant Chloroplast Inverted Repeats

Rui Zhang, Fangfang Ge, Huayang Li, Yudong Chen, Ying Zhao, Ying Gao, Zhiguo Liu, Long Yang

Database

DOI

2018

PGD: Pineapple Genomics Database

Huimin Xu, Qingyi Yu, Yan Shi, Xiuting Hua, Haibao Tang, Long Yang, Ray Ming, Jisen Zhang

Horticulture Research

DOI

2018

Comparative genome-wide characterization leading to simple sequence repeat marker development for Nicotiana

Xuewen Wang, Shuai Yang, Yongdui Chen, Shumeng Zhang, Qingshi Zhao, Meng Li, Yulong Gao, Long Yang, Jeffrey L. Bennetzen

BMC Genomics

DOI

2018

Comprehensive transcriptome profiling of soybean leaves in response to simulated acid rain

Long Yang, Yong‐Chao Xu, Rui Zhang, Xiaotong Wang, Chao Yang

Ecotoxicology and Environmental Safety

DOI

2018

Functional and evolution characterization of SWEET sugar transporters in Ananas comosus

Chengying Guo, Huayang Li, Xinyao Xia, Xiuyuan Liu, Long Yang

Biochemical and Biophysical Research Communications

DOI

2018

GAN: a platform of genomics and genetics analysis and application inNicotiana

Shuai Yang, Xingwei Zhang, Huayang Li, Yudong Chen, Long Yang

Database

DOI

2017

Genome-wide analysis of SSR and ILP markers in trees: diversity profiling, alternate distribution, and applications in duplication

Xinyao Xia, Lin Lin Luan, Guanghua Qin, Yu Li, Zhi Wei Wang, Wan Chen Dong, Yumin Song, Yuling Qiao, Xian Sheng Zhang, Ya Lin Sang, Long Yang

Scientific Reports

DOI

2017

Phylogenetic relationships of ascomycetes and basidiomycetes based on comparative genomics analysis

Xunbiao Liu, Qianqian Zhang, Xinyao Xia, Xiuyuan Liu, Lei Ge, Long Yang

Genes & Genomics

DOI

2017

Genome re-sequencing reveals the history of apple and supports a two-stage model for fruit enlargement

Naibin Duan, Yang Bai, Honghe Sun, Nan Wang, Yumin Ma, Mingjun Li, Xin Wang, Chen Jiao, Noah Legall, Linyong Mao, Sibao Wan, Kun Wang, Tianming He, Shouqian Feng, Zongying Zhang, Zhiquan Mao, Xiang Shen, Xiaoliu Chen, Xiaoliu Chen, Yuanmao Jiang, Wu Shujing, Chengmiao Yin, Shunfeng Ge, Long Yang, Shenghui Jiang, Haifeng Xu, Jingxuan Liu, Deyun Wang, Changzhi Qu, Yicheng Wang, Weifang Zuo, Li Xiang, Chang Liu, Daoyuan Zhang, Yuan Gao, Kenong Xu, Kenong Xu, Thomas Chao, Gennaro Fazio, Huairui Shu, Gan-Yuan Zhong, Lailiang Cheng, Zhangjun Fei, Xuesen Chen, Xuesen Chen

Nature Communications

DOI

2016

CsSNP: A Web-Based Tool for the Detecting of Comparative Segments SNPs

Yi Wang, Shuangshuang Wang, Zhou Dongjie, Shuai Yang, Yong‐Chao Xu, Chao Yang, Long Yang

Journal of Computational Biology

DOI

2016

Genome-wide analysis of the fructose 1,6-bisphosphate aldolase (FBA) gene family and functional characterization of FBA7 in tomato

Bingbing Cai, Qiang Li, Yong‐Chao Xu, Long Yang, Huangai Bi, Xizhen Ai

Plant Physiology and Biochemistry

DOI

2016

Identification of genomic sites for CRISPR/Cas9-based genome editing in the Vitis vinifera genome

Yi Wang, Xianju Liu, Chong Ren, Gan‐Yuan Zhong, Long Yang, Shaohua Li, Zhenchang Liang

BMC Plant Biology

DOI

2015

Genome-wide distribution comparative and composition analysis of the SSRs in Poaceae

Yi Wang, Chao Yang, Qiaojun Jin, Zhou Dongjie, Shuangshuang Wang, Yuanjie Yu, Long Yang

BMC Genetics

DOI

2015

Genome-wide identification and characterization of R2R3-MYB transcription factors in pear

Shouqian Feng, Yong‐Chao Xu, Long Yang, Shasha Sun, Deyun Wang, Xuesen Chen

Scientia Horticulturae

DOI

2015

Transcriptome profiling reveals auxin suppressed anthocyanin biosynthesis in red-fleshed apple callus (Malus sieversii f. niedzwetzkyana)

Xiaohao Ji, Rui Zhang, Nan Wang, Long Yang, Xuesen Chen

Plant Cell Tissue and Organ Culture (PCTOC)

DOI

2015

Comparative Transcriptomes Analysis of Red- and White-Fleshed Apples in an F1 Population of Malus sieversii f. niedzwetzkyana Crossed with M. domestica ‘Fuji’

Nan Wang, Yi Zheng, Naibin Duan, Zongying Zhang, Xiaohao Ji, Shenghui Jiang, Shasha Sun, Long Yang, Yang Bai, Zhangjun Fei, Xuesen Chen

PLoS ONE

DOI

2015

Genomic-associated Markers and comparative Genome Maps of Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola

Wenjie Feng, Yi Wang, Lisha Huang, Chuanshun Feng, Zhaohui Chu, Xinhua Ding, Long Yang

World Journal of Microbiology and Biotechnology

DOI

2015

Large-scale detection and application of expressed sequence tag single nucleotide polymorphisms in Nicotiana

Y. Wang, Daizhan Zhou, S. Wang, Long Yang

Genetics and Molecular Research

DOI

2014

Transcriptional Analyses of Natural Leaf Senescence in Maize

Wei Yang Zhang, Yong Chao Xu, Wen Lan Li, Long Yang, Xun Yue, Xian Sheng Zhang, Xiang Zhao

PLoS ONE

DOI

2013

烟草主栽品种的SSR指纹图谱的构建及其应用

黄莉莎，曹恒春，王毅，高强，于元杰，王玉军，杨龙

《山东农业大学学报(自然科学版)》

2013

Large-scale development of PIP and SSR markers and their complementary applied in Nicotiana

Linkai Huang, Hengchun Cao, Long Yang, Yang Yu, Y. Wang

Russian Journal of Genetics

DOI

2012

TGB: the tobacco genetics and breeding database

Hengchun Cao, Yujun Wang, Zhixin Xie, Lisha Huang, Houjuan Xu, Li Zhang, Ming Bian, Guangwei Sun, Shuaishuai Han, Long Yang

Molecular Breeding

DOI

2012

Comparative Evaluation of Intron Prediction Methods and Detection of Plant Genome Annotation Using Intron Length Distributions

Long Yang, Hwan-Gue Cho

Genomics & Informatics

DOI

精选作品

期刊论文

Straw incorporation and nitrogen fertilisation are associated with improved tobacco yield and distinct soil ecological responses in a wheat–tobacco rotation system

Integrative transcriptomic and metabolomic analysis reveals variety-specific metabolic divergence and regulatory networks in fresh leaves of flue-cured tobacco

Genome-Wide Analysis and Characterization of CYP450 Gene Family in Tobacco (Nicotiana tabacum L)

Sub-micrometer oyster shell powder mitigates cadmium phytotoxicity through soil and root barrier reinforcement

Microbial fertilizers modulate tobacco growth and development through reshaping soil microbiome and metabolome

Rotation-driven changes in physicochemical properties modulate soil microbial diversity and community complexity in tobacco-woad soils

PscOA: a plant scRNA-seq marker gene database for enhanced cellular transcriptome understanding

Genome-Wide Identification of NBS-LRR Family in Three Nicotiana Genomes and Their Expression During Disease Resistance

Integrated untargeted and targeted metabolomics and microbiome profiling reveal the effects of storage duration on the flavor quality of Rizhao Jinhua white tea

Aroma formation in jasmine tea: insights from metabolomics and microbial community analyses during multiple scenting processes

Abscisic acid-mediated lignin biosynthesis and cell wall reinforcement confer cadmium tolerance in Nicotiana alata

Integrated Physiological, Transcriptomic, and Metabolomic Analyses Reveal the Response Mechanisms of Selenium (Se) and Boron (B) Under Lead (Pb) Stress in Tobacco

NMOD: a multi-dimensional omics database for disease resistance research in Nicotiana

Polysaccharides from Ulva prolifera promote tobacco plant growth by benefiting rhizosphere bacterial community in acidic soil

Unraveling the synergistic role of ABA and ethylene in root lignin synthesis: A key molecular mechanism for tobacco response to PS-NPs using multi-omics approaches

Population Genomics Provides Insights Into Genomic Features of Inbreeding Depression in Arma Chinensis

Revealing novel insights into the improvement of greenhouse tea quality through exogenous substance interventions using targeted and untargeted metabolomics and microbial community analyses

Toll/interleukin-1 receptor-only genes contribute to immune responses in maize

Transport Dynamics and Physiological Responses of Polystyrene Nanoplastics in Pakchoi: Implications for Food Safety and Environmental Health

Whole genome re-sequencing in 437 tobacco germplasms identifies plant height candidate genes

Effect of potassium fulvate on continuous tobacco cropping soils and crop growth

Tobacco/Isatis intercropping system improves soil quality and increase total production value

Isolation, identification, and mechanism analysis of plant growth-promoting rhizobacteria in tobacco

Exogenous Eugenol Alleviates Salt Stress in Tobacco Seedlings by Regulating the Antioxidant System and Hormone Signaling

The Characterization of G-Quadruplexes in Tobacco Genome and Their Function under Abiotic Stress

Progress in Microbial Fertilizer Regulation of Crop Growth and Soil Remediation Research

Eugenol improves salt tolerance via enhancing antioxidant capacity and regulating ionic balance in tobacco seedlings

Integrated Transcriptomics and Metabolomics Analysis Promotes the Understanding of Adventitious Root Formation in Eucommia ulmoides Oliver

Transcriptional, physiological and ultrastructure levels revealed silicon enhanced cadmium detoxification and functional compound accumulation in pakchoi

Microbial Community Shifts in Tea Plant Rhizosphere under Seawater Stress: Enrichment of Beneficial Taxa

Aquaporin mediated silicon-enhanced root hydraulic conductance is benefit to cadmium dilution in tobacco seedlings

Expression patterns and evidence of the expansion of Nicotiana tabacum L. TALE genes in the Solanaceae family

Recovery of Cembratrien-Diols from Waste Tobacco (Nicotiana tabacum L.) Flowers by Microwave-Assisted Deep Eutectic Solvent Extraction: Optimization, Separation, and In Vitro Bioactivity

Tobacco/Salvia miltiorrhiza Intercropping Improves Soil Quality and Increases Total Production Value

Genome-wide identification and expression analysis of NF-Y gene family in tobacco (Nicotiana tabacum L.)

Genome-wide identification of hormone biosynthetic and metabolism genes in the 2OGD family of tobacco and JOX genes silencing enhances drought tolerance in plants

The application of plant growth-promoting rhizobacteria enhances the tolerance of tobacco seedling to salt stress.

Polyploid Genome Assembly Provides Insights into Morphological Development and Ascorbic Acid Accumulation of Sauropus androgynus

CRISPR/Cas9 Editing Sites Identification and Multi-Elements Association Analysis in Camellia sinensis

Application of Multi-Perspectives in Tea Breeding and the Main Directions

Autotoxins in continuous tobacco cropping soils and their management

The chromosome-level genome of Eucommia ulmoides provides insights into sex differentiation and α-linolenic acid biosynthesis

RNA-seq for comparative transcript profiling in leaves of strawberry seedlings under salinity stress

Bacterial dynamic of flue-cured tobacco leaf surface caused by change of environmental conditions

Plant Growth-Promoting Rhizobacteria Microbial Fertilizer Changes Soils’ Microbial Structure and Promotes Healthy Growth of Cigar Tobacco Plants

Analysis of transcriptomic and metabolomic differences revealed the mechanism underlying the tobacco response to low-temperature

Transcriptome analysis revealed enrichment pathways and regulation of gene expression associated with somatic embryogenesis in Camellia sinensis

Application progress of CRISPR/Cas9 genome-editing technology in edible fungi

Metabolites and microbial characteristics of Fu brick tea after natural fermentation

Prediction of global potential suitable habitats of Nicotiana alata Link et Otto based on MaxEnt model

Identification and Analysis of the Catalase Gene Family Response to Abiotic Stress in Nicotiana tabacum L.

Multi-factor correlation analysis of the effect of root-promoting practices on tobacco rhizosphere microecology in growth stages

Effects of cadmium on transcription, physiology, and ultrastructure of two tobacco cultivars

The Function of BBX Gene Family under Multiple Stresses in Nicotiana tabacum

Genome-wide identification and expression analyses of late embryogenesis abundant (LEA) gene family in tobacco (Nicotiana tabacum L.) reveal their function in abiotic stress responses

Evolutions and Managements of Soil Microbial Community Structure Drove by Continuous Cropping

NRD: Nicotiana Resistance Database, a Comprehensive Platform of Stress Tolerance in Nicotiana

PlantGF: an analysis and annotation platform for plant gene families

Important Roles of Key Genes and Transcription Factors in Flower Color Differences of Nicotiana alata

Transcriptome and Metabolome Analysis Revealed the Freezing Resistance Mechanism in 60-Year-Old Overwintering Camellia sinensis

Transcriptional regulation and functional analysis of Nicotiana tabacum under salt and ABA stress

PID: An integrative and comprehensive platform of plant intron

ABA signaling pathway genes and function during abiotic stress and berry ripening in Vitis vinifera

Short Tandem Repeats in plants: Genomic distribution and function prediction

Systematic Analysis of REBASE Identifies Numerous Type I Restriction-Modification Systems with Duplicated, Distinct hsdS Specificity Genes That Can Switch System Specificity by Recombination

基于FUNGuild的镰刀菌根腐病发病烟株根际真菌群落研究

Genome-Wide Identification and Analysis of the NPR1-Like Gene Family in Bread Wheat and Its Relatives

Genome-Wide Identification and Characterization of Xyloglucan Endotransglycosylase/Hydrolase in Ananas comosus during Development

Proteomic variation in Vitis amurensis and V. vinifera buds during cold acclimation

DNA sequence repeats identify numerous Type I restriction‐modification systems that are potential epigenetic regulators controlling phase‐variable regulons; phasevarions

Genome-wide identification and expression analysis of the dof (DNA binding with one finger) protein family in monocot and dicot species

The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge)

Plant-GQ: An Integrative Database of G-Quadruplex in Plant

Effects of tillage managements and maize straw returning on soil microbiome using 16S rDNA sequencing

Genome-wide identification and expression analysis of HKT transcription factor under salt stress in nine plant species

PCIR: a database of Plant Chloroplast Inverted Repeats

PGD: Pineapple Genomics Database

Comparative genome-wide characterization leading to simple sequence repeat marker development for Nicotiana