百晓学者学者目录

游欣欣

副教授、副研究员、教授，广东海洋大学

精选作品

期刊论文

2026

基于Cyt-b和D-loop序列的中国南海高体鰤野生与养殖群体遗传多样性及遗传结构

何旺林，田昌绪，黄洋，邓秋霞，游欣欣，石红娟，朱春华

《广东海洋大学学报》

2026

盐度突变对高体鰤幼鱼渗透调节、氧化应激及免疫功能的影响

李梦婷，茹笑影，黄洋，胡静波，李航，游欣欣，邓秋霞，张日钊，林浩毅，谭海敏，朱春华

《广东海洋大学学报》

2026

Long-term crowding reshapes energy allocation and metabolism in pearl gentian grouper (Epinephelus fuscoguttatus ♀ × E. lanceolatus ♂): Evidence from energy budget, physiology and transcriptomics

Zuqiang Liu, Haixiang Zhao, Yi Tao, Mengrui Chen, Xinxin You, Xian Li

Aquaculture

DOI

2026

Transcriptome Analysis of Different Stages in the Early Ovarian Development of the Greater Amberjack (Seriola dumerili)

Qiu-Xia Deng, Yang Huang, Xiaoying Ru, Haoyi Lin, Xin-Xin You, Ruijuan Hao, Hang Li, Qin Hu, Dongying Zhang, Yanfei Zhao, Jinhui Wu, Guangli Li, Chunhua Zhu

Animals

DOI

2025

Chromosome-Scale Genome Assembly and Genome-Wide Identification of Antimicrobial Peptide-Containing Genes in the Endangered Long-Finned Gudgeon Fish (Rhinogobio ventralis)

Jie-Ming Chen, Xin-Hui Zhang, Yanping Li, Yunyun Lv, Xin-Xin You, Qiong Shi, Zhengyong Wen

Biology

DOI

2025

Whole-genome sequencing and resequencing for genome-wide identification of candidate sex-specific markers in the camouflage grouper (Epinephelus polyphekadion)

Shoujia Jiang, Yao-Rong Wang, Jin Zhang, Zhiqiang Ruan, Chao Bian, Jia-Qi Lin, Shujia Liao, Kejun Chen, Yu-Qing Yang, Jinhui Wu, Xin-Xin You, Cheng Peng, Shufang Cui, Hao-Ran Lin, Q. Shi, Shui-Sheng Li, Yong Zhang

Aquaculture Reports

DOI

2024

Genome-Wide Identification, Sequence Alignment, and Transcription of Five Sex-Related Genes in Largemouth Bass (Micropterus Salmoides).

Xin-Hui Zhang, Zhiqiang Ruan, Cheng-Fei Sun, Cancan Hu, Yu Huang, Xin-Xin You, Xinwen Wang, Jun-Min Xu, Huan Liu, Xin Liu, Xing Ye, Q. Shi

Frontiers in Bioscience

DOI

2023

Mechanisms of sex differentiation and sex reversal in hermaphrodite fish as revealed by the Epinephelus coioides genome

Shuisheng Li, Wanshun Li, Shoujia Jiang, Yi Jing, Ling Xiao, Yangyang Yu, Yun Liu, Yanhong Li, Dengdong Wang, Jiang Li, Cheng Peng, Jiaxing Chen, Danqi Lu, Bin Wu, Xuanmin Guang, Junping Ma, Xinxin You, Yuqing Yang, Su Liu, Xiaodong Fang, Qiang Gao, Qiong Shi, Haoran Lin, Manfred Schartl, Zhen Yue, Yong Zhang

Molecular Ecology Resources，Vol. 230, No. 40

DOI

2023

Whole-genome resequencing reveals recent signatures of selection in five populations of largemouth bass (Micropterus salmoides)

Cheng-Fei Sun, Xin-Hui Zhang, Jun-Jian Dong, Xin-Xin You, Yuan-Yuan Tian, Feng-Ying Gao, He-Tong Zhang, Q. Shi, Xing Ye

Zoological Research

DOI

2023

Genomics comparisons of three chromosome-level mudskipper genome assemblies reveal molecular clues for water-to-land evolution and adaptation

Chao Bian, Yu Huang, Ruihan Li, Peng Xu, Xin-Xin You, Yunyun Lv, Zhiqiang Ruan, Jie-Ming Chen, Jun-Min Xu, Q. Shi

Journal of Advanced Research

DOI

2022

Whole genome sequencing of the fast-swimming Southern bluefin tuna (Thunnus maccoyii)

Xiaomeng Zhao, Yu Huang, Chao Bian, Xin-Xin You, Xin-Hui Zhang, Jie-Ming Chen, Min Wang, Cancan Hu, Yun-Ling Xu, Jun-Min Xu, Q. Shi

Frontiers in Genetics

DOI

2022

A chromosome-level genome assembly of the jade perch (Scortum barcoo)

Yi-Shan Lu, Ruihan Li, Li-Qun Xia, Jun Cheng, Hong-Li Xia, Qiuyao Zhan, Da-Peng Yu, Xin-Xin You, Ruo-Bo Gu, Jun-Min Xu, Q. Shi, Chao Bian

Scientific Data

DOI

2022

A Gastrointestinal Metagenomic Study On Mudskippers Supports Their Terrestrial Adaptation

Bo Dong, Jing Liu, B. Chen, Yuqi Huang, Peng-Hui Ai, Xin-Xin You, Q. Shi, Wen Huang

DOI

2022

Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes

Xi-Dong Mu, Yi Liu, Chao Liu, Chen-Xi Zhao, Ruihan Li, Xin-Xin You, Ye-Xin Yang, Xuejie Wang, Yin-Chang Hu, Q. Shi, Chao Bian

GigaScience

DOI

2022

Multi-Omics Study on the Molecular Mechanisms of Tetraodon Nigroviridis Resistance to Exogenous Vibrio Parahaemolyticus Infection

Shoujia Jiang, Li-Jun Fu, Zi-Jian Gao, Hengwei Deng, Yong Zhang, Xin-Xin You, Q. Shi, Dan-Qi Lu

Frontiers in Marine Science

DOI

2022

Evolutionary Genomics Reveals Multiple Functions of Arylalkylamine N-Acetyltransferase in Fish

Yu Huang, Jia Li, Chao Bian, Ruihan Li, Xin-Xin You, Q. Shi

Frontiers in Genetics

DOI

2022

High-Throughput Identification of Antihypertensive Peptides (AHTPs) and Characterization of AHTP-Derived Genes in the Lined Seahorse (Hippocampus erectus)

Yu Huang, Xiyang Chen, Hao-Ming Shu, P. Xiao, Xueqiang Lin, Jun-Min Xu, Chao Bian, Xin-Xin You, Jian Yang, Q. Shi

Frontiers in Marine Science

DOI

2022

Genomic selection of orange-spotted grouper (Epinephelus coioides) based on multiplex PCR enrichment capture sequencing

Xinxin Shan, Xin-Hui Zhang, Zhiqiang Ruan, Jie-Ming Chen, Q. Shi, Jun-Min Xu, Xin-Xin You

Aquaculture & Fisheries

DOI

2021

Balancing selection maintains ancient polymorphisms at conserved enhancers for the olfactory receptor genes of a Chinese marine fish

Qiaohong Liu, Mrinal Mishra, Ayush S. Saxena, Haohao Wu, Ying Qiu, Xinhui Zhang, Xinxin You, Shaoxiong Ding, Michael M. Miyamoto

Molecular Ecology，Vol. 300, No. 160

DOI

2021

Temporal dynamics of teleost populations during the Pleistocene: a report from publicly available genome data

Jia Li, Chao Bian, Yunhai Yi, Hui Yu, Xin-Xin You, Q. Shi

BMC Genomics

DOI

2021

Characterization of five caspase genes and their transcriptional changes in response to exogenous iridescent virus challenge in the whiteleg shrimp (Litopenaeus vannamei)

Shengtao Guo, Zheng Wen, Xin-Hui Zhang, Fan Li, Hai-Yue Cui, Xueqiang Lin, Q. Shi, Xin-Xin You

DOI

2021

The first Conus genome assembly reveals a primary genetic central dogma of conopeptides in C. betulinus

Chao Peng, Yu Huang, Chao Bian, Jia Li, Jie Liu, Kai Zhang, Xin-Xin You, Zhilong Lin, Yanbin He, Jie-Ming Chen, Yunyun Lv, Zhiqiang Ruan, Xin-Hui Zhang, Yunhai Yi, Yanping Li, Xueqiang Lin, Ruo-Bo Gu, Jun-Min Xu, Jia'an Yang, Chong-Xu Fan, G. Yao, Ji-Sheng Chen, Hui Jiang, Bingmiao Gao, Q. Shi

Cell Discovery

DOI

2021

Construction of a chromosome-level genome assembly for genome-wide identification of growth-related quantitative trait loci in Sinocyclocheilus grahami (Cypriniformes, Cyprinidae)

Yanhui Yin, Xin-Hui Zhang, Xiao-Ai Wang, Ruihan Li, Yuanwei Zhang, X. Shan, Xin-Xin You, Xin-Di Huang, A. Wu, Mo Wang, Xiaofu Pan, Chao Bian, Wan-Sheng Jiang, Q. Shi, Junxing Yang

Zoological Research

DOI

2021

Draft Genome of the Mirrorwing Flyingfish (Hirundichthys speculiger)

Peng Xu, Chen-Xi Zhao, Xin-Xin You, Fan Yang, Jie-Ming Chen, Zhiqiang Ruan, Ruo-Bo Gu, Jun-Min Xu, Chao Bian, Q. Shi

Frontiers in Genetics

DOI

2021

Genome-wide association improves genomic selection for ammonia tolerance in the orange-spotted grouper (Epinephelus coioides)

Xinxin Shan, Teng-Fei Xu, Zhiyuan Ma, Xin-Hui Zhang, Zhiqiang Ruan, Jie-Ming Chen, Q. Shi, Xin-Xin You

DOI

2021

Whole-Genome Sequencing and Genome-Wide Studies of Spiny Head Croaker (Collichthys lucidus) Reveals Potential Insights for Well-Developed Otoliths in the Family Sciaenidae

Wu Gan, Chen-Xi Zhao, Xinran Liu, Chao Bian, Q. Shi, Xin-Xin You, Wei Song

Frontiers in Genetics

DOI

2021

A chromosome-level genome assembly of the striped catfish (Pangasianodon hypophthalmus).

Zi-Jian Gao, Xin-Xin You, Xin-Hui Zhang, Jie-Ming Chen, Teng-Fei Xu, Yu Huang, Xueqiang Lin, Jun-Min Xu, Chao Bian, Q. Shi

Genomics

DOI

2021

Toll protein family structure, evolution and response of the whiteleg shrimp (Litopenaeus vannamei) to exogenous iridescent virus.

Hong-Tao Liu, Shengtao Guo, Yugui He, Q. Shi, Ming-Qiu Yang, Xin-Xin You

Journal of Fish Diseases

DOI

2021

Expressions of melanopsins in telencephalon imply their function in synchronizing semilunar spawning rhythm in the mudskipper Boleophthalmus pectinirostris.

He Ma, Ming-Shu Yang, Yu-Ting Zhang, Hengtong Qiu, Xin-Xin You, Shi-Xi Chen, W. Hong

General and Comparative Endocrinology

DOI

2021

Whole-Genome Sequencing of Sinocyclocheilus maitianheensis Reveals Phylogenetic Evolution and Immunological Variances in Various Sinocyclocheilus Fishes

Ruihan Li, Xiao-Ai Wang, Chao Bian, Zi-Jian Gao, Yuanwei Zhang, Wansheng Jiang, Mo Wang, Xin-Xin You, Le Cheng, Xiaofu Pan, Junxing Yang, Q. Shi

Frontiers in Genetics

DOI

2021

A Chromosome-Level Genome Assembly of the Mandarin Fish (Siniperca chuatsi)

Wei-Dong Ding, Xin-Hui Zhang, Xiaomeng Zhao, Wu Jing, Zhe-Ming Cao, Jia Li, Yu Huang, Xin-Xin You, Min Wang, Q. Shi, X. Bing

Frontiers in Genetics

DOI

2021

A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense

Shu-Bo Jin, Chao Bian, Su-Fei Jiang, Kai Han, Yi-Wei Xiong, Wen-Yi Zhang, Chengcheng Shi, H. Qiao, Zi-Jian Gao, Ruihan Li, Yu Huang, Yong-Sheng Gong, Xin-Xin You, G. Fan, Q. Shi, H. Fu

GigaScience

DOI

2020

Molecular evolution of melatonin receptor genes (mtnr) in vertebrates and its shedding light on mtnr1c.

Yanping Li, Yunyun Lv, Chao Bian, Xin-Xin You, Q. Shi

Gene

DOI

2020

Fish Genomics

Yu Huang, Chao Bian, Yulu Liu, Xin-Xin You, Hui Yu, Yunhai Yi, Bing Xie, Qiong Shi

Encyclopedia of Marine Biotechnology

DOI

2020

Simulation Analysis on Genomic Selection of Grouper (Epinephelus coioides) Breeding for Categorical Traits

Zhiyuan Ma, Xin-Xin You

Conference on Computer and Communications Security

DOI

2020

Developing Single Nucleotide Polymorphisms for Identification of Cod Products by RAD-Seq

Shoujia Jiang, Xingyu Ma, Tao Li, Chang-Qing Zhu, Xin-Xin You

Animals

DOI

2020

The First Genome Survey of the Antarctic Krill (Euphausia superba) Provides a Valuable Genetic Resource for Polar Biomedical Research

Yuting Huang, Chao Bian, Zhaoqun Liu, Ling-Ling Wang, Chang-Hu Xue, Hong-Liang Huang, Yunhai Yi, Xin-Xin You, Wei Song, Xiang-Zhao Mao, Linsheng Song, Q. Shi

Marine Drugs

DOI

2020

Research advances in the genomics and applications for molecular breeding of aquaculture animals

Xin-Xin You, Xinxin Shan, Q. Shi

DOI

2020

The American Paddlefish Genome Provides Novel Insights into Chromosomal Evolution and Bone Mineralization in Early Vertebrates

Pei-Lin Cheng, Yu Huang, Yunyun Lv, H. Du, Zhiqiang Ruan, Chuang-Ju Li, H. Ye, Hui Zhang, Jin-Ming Wu, Chengyou Wang, Rui Ruan, Yanping Li, Chao Bian, Xin-Xin You, Chengcheng Shi, Kai Han, Jun-Min Xu, Q. Shi, Q. Wei

Molecular biology and evolution

DOI

2020

Putative Antimicrobial Peptides in Fish: Using Zebrafish as a Representative.

Xiyang Chen, Yunhai Yi, Chao Bian, Xin-Xin You, Q. Shi

Protein Peptide Letters

DOI

2020

Chromosome Genome Assembly of the Leopard Coral Grouper (Plectropomus leopardus) With Nanopore and Hi-C Sequencing Data

Yong-Bo Wang, Xin Wen, Xin-Hui Zhang, Shuyuan Fu, Jin-Ye Liu, Wei Tan, Ming-Cheng Luo, Longlong Liu, Hai Huang, Xin-Xin You, Jian Luo, Fu-Xiao Chen

Frontiers in Genetics

DOI

2020

Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy (Coilia nasus) provides novel insights into migratory adaptation

Gangchun Xu, Chao Bian, Zhi-Juan Nie, Jia Li, Yu-Yu Wang, Dong Xu, Xin-Xin You, Hong-Bo Liu, Jian-Cao Gao, Hong-Xia Li, Kai Liu, Jian Yang, Quanjie Li, Nailin Shao, Yan B. Zhuang, Di-An Fang, T. Jiang, Yunyun Lv, Yu Huang, Ruo-Bo Gu, Jun-Min Xu, W. Ge, Q. Shi, Pao Xu

GigaScience

DOI

2019

Divergence, evolution and adaptation in ray-finned fish genomes

Chao Bian, Yu Huang, Jia Li, Xin-Xin You, Yunhai Yi, W. Ge, Q. Shi

Science China Life Sciences

DOI

2019

High-Throughput Identification of Putative Antimicrobial Peptides from Multi-Omics Data of the Lined Seahorse (Hippocampus erectus)

Xiyang Chen, Yunhai Yi, Xin-Xin You, Jie Liu, Q. Shi

Marine Drugs

DOI

2019

Identification of Candidate Genes for the Plateau Adaptation of a Tibetan Amphipod, Gammarus lacustris, Through Integration of Genome and Transcriptome Sequencing

Shu-Bo Jin, Chao Bian, Su-Fei Jiang, Sheng-Ming Sun, Lei Xu, Yi-Wei Xiong, H. Qiao, Wen-Yi Zhang, Xin-Xin You, Jia Li, Yong-Sheng Gong, B. Ma, Q. Shi, H. Fu

Frontiers in Genetics

DOI

2019

Whole Genome Sequencing of the Blue Tilapia (Oreochromis aureus) Provides a Valuable Genetic Resource for Biomedical Research on Tilapias

Chao Bian, Jia Li, Xueqiang Lin, Xiyang Chen, Yunhai Yi, Xin-Xin You, Yi-Ping Zhang, Yunyun Lv, Q. Shi

Marine Drugs

DOI

2019

Genome resequencing of the orange-spotted grouper (Epinephelus coioides) for a genome-wide association study on ammonia tolerance

Teng-Fei Xu, Xin-Hui Zhang, Zhiqiang Ruan, Hui Yu, Jie-Ming Chen, Shoujia Jiang, Chao Bian, Bin Wu, Q. Shi, Xin-Xin You

Aquaculture

DOI

2019

Oxygenation properties of hemoglobin and the evolutionary origins of isoform multiplicity in an amphibious air-breathing fish, the blue-spotted mudskipper (Boleophthalmus pectinirostris)

Jay F. Storz, Chandrasekhar Natarajan, Magnus K Grouleff, M. Vandewege, Federico G. Hoffmann, Xin-Xin You, B. Venkatesh, A. Fago

Journal of Experimental Biology

DOI

2019

High-throughput identification of heavy metal binding proteins from the byssus of chinese green mussel (Perna viridis) by combination of transcriptome and proteome sequencing

Xin-Hui Zhang, Hui-Wei Huang, Yanbin He, Zhiqiang Ruan, Xin-Xin You, Wanshun Li, B. Wen, Zizheng Lu, Bing Liu, Xu Deng, Q. Shi

PLoS ONE

DOI

2019

Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey

Jun-Min Xu, Yanping Li, Yunyun Lv, Chao Bian, Xin-Xin You, D. Endoh, H. Teraoka, Q. Shi

Genes

DOI

2019

A comparative transcriptomic study on developmental gonads provides novel insights into sex change in the protandrous black porgy (Acanthopagrus schlegelii).

Kai Zhang, Jin Xu, Zhi-Wei Zhang, Yu Huang, Zhiqiang Ruan, Shu-Yin Chen, Fei Zhu, Xin-Xin You, Chao-Feng Jia, Qian Meng, Ruo-Bo Gu, Xueqiang Lin, Jun-Min Xu, Pao Xu, Zhi-Yong Zhang, Q. Shi

Genomics

DOI

2019

ナマズ(Ictalurus punctatus)における成長および性関連形質のための高密度連鎖地図およびQTL微細マッピングの構築【JST・京大機械翻訳】

Shi-Yong Zhang, Xin-Hui Zhang, Xiao-Hui Chen, Teng-Fei Xu, Ming-Hua Wang, Qin Qin, Li-Qiang Zhong, Hucheng Jiang, Xiao-Hua Zhu, Hong-Yan Liu, Jun-Jie Shao, Zhifei Zhu, Q. Shi, Wen-Ji Bian, Xin-Xin You

2019

An SNP-Based Genetic Map and QTL Mapping for Growth Traits in the Red-Spotted Grouper (Epinephelus akaara)

Xiang Wang, Shoujia Jiang, Leyun Zheng, Ling Xiao, Xin-Hui Zhang, Deng-Dong Wang, Shui-Sheng Li, Q. Shi, Shuiqing Wu, Hao-Ran Lin, Xin-Xin You, Yong Zhang

Genes

DOI

2019

Molecular responses of an estuarine oyster to multiple metal contamination in Southern China revealed by RNA-seq.

Yunlong Li, Xin-Hui Zhang, Jie Meng, Jie-Ming Chen, Xin-Xin You, Q. Shi, Wen-Xiong Wang

Science of the Total Environment

DOI

2019

Whole Genome Sequencing of Chinese White Dolphin (Sousa chinensis) for High-Throughput Screening of Antihypertensive Peptides

Kuntong Jia, Chao Bian, Yunhai Yi, Yanping Li, P. Jia, Duan Gui, Xi-Yang Zhang, Wenzhi Lin, Xian Sun, Yunyun Lv, Jia Li, Xin-Xin You, Q. Shi, Meisheng Yi, Yu-Ping Wu

Marine Drugs

DOI

2019

Construction of a High-Density Linkage Map and QTL Fine Mapping for Growth- and Sex-Related Traits in Channel Catfish (Ictalurus punctatus)

Shi-Yong Zhang, Xin-Hui Zhang, Xiao-Hui Chen, Teng-Fei Xu, Ming-Hua Wang, Q. Qin, Li-Qiang Zhong, Hucheng Jiang, Xiao-Hua Zhu, Hong-Yan Liu, Jun-Jie Shao, Zhifei Zhu, Q. Shi, Wen-Ji Bian, Xin-Xin You

Frontiers in Genetics

DOI

2019

Characterization of two kcnk3 genes in Nile tilapia (Oreochromis niloticus): Molecular cloning, tissue distribution, and transcriptional changes in various salinity of seawater.

Zheng Wen, Chao Bian, Xin-Xin You, Xin-Hui Zhang, Jia Li, Qiuyao Zhan, Yuxiang Peng, Yuan-You Li, Q. Shi

Genomics

DOI

2019

Draft Genome and Complete Hox-Cluster Characterization of the Sterlet (Acipenser ruthenus)

Pei-Lin Cheng, Yu Huang, H. Du, Chuang-Ju Li, Yunyun Lv, Rui Ruan, H. Ye, Chao Bian, Xin-Xin You, Jun-Min Xu, Xu-Fang Liang, Q. Shi, Q. Wei

Frontiers in Genetics

DOI

2019

Genome Sequencing of the Japanese Eel (Anguilla japonica) for Comparative Genomic Studies on tbx4 and a tbx4 Gene Cluster in Teleost Fishes

Weiwei Chen, Chao Bian, Xin-Xin You, Jia Li, Li-Zhen Ye, Zheng Wen, Yunyun Lv, Xin-Hui Zhang, Jun-Min Xu, Shao-Sen Yang, Ruo-Bo Gu, Xueqiang Lin, Q. Shi

Marine Drugs

DOI

2019

Whole Genome Sequencing of the Giant Grouper (Epinephelus lanceolatus) and High-Throughput Screening of Putative Antimicrobial Peptide Genes

Deng-Dong Wang, Xiyang Chen, Xin-Hui Zhang, Jia Li, Yunhai Yi, Chao Bian, Q. Shi, Hao-Ran Lin, Shui-Sheng Li, Yong Zhang, Xin-Xin You

Marine Drugs

DOI

2019

A Comparative Metagenomics Study on Gastrointestinal Microbiota in Amphibious Mudskippers and Other Vertebrate Animals

Yunhai Yi, Li-Feng Liang, Zhilin Wang, Peng-Hui Ai, Xin-Xin You, Chao Bian, Q. Shi, Bo Dong

Animals

DOI

2019

Whole-Genome Sequencing of the Giant Devil Catfish, Bagarius yarrelli

Wansheng Jiang, Yunyun Lv, Le Cheng, Kun-Feng Yang, Chao Bian, Xiao-Ai Wang, Yanping Li, Xiaofu Pan, Xin-Xin You, Yuanwei Zhang, Jin-Long Yang, Jia Li, Xin-Hui Zhang, Shu-Wei Liu, Chao Sun, Junxing Yang, Q. Shi

Genome Biology and Evolution

DOI

2019

Paralogues From the Expanded Tlr11 Gene Family in Mudskipper (Boleophthalmus pectinirostris) Are Under Positive Selection and Respond Differently to LPS/Poly(I:C) Challenge

Hengtong Qiu, J. Fernandes, W. Hong, Hai-Xu Wu, Yu-Ting Zhang, Sheng Huang, Dong-Teng Liu, Hui Yu, Qiong Wang, Xin-Xin You, Shi-Xi Chen

Frontiers in Immunology

DOI

2019

High throughput screening of small immune peptides and antimicrobial peptides from the Fish-T1K database.

Yunhai Yi, Yunyun Lv, Xin-Xin You, Jie-Ming Chen, Chao Bian, Yu Huang, Jun-Min Xu, L. Deng, Q. Shi

Genomics

DOI

2018

A genome-wide association study on growth traits in orange-spotted grouper (Epinephelus coioides) with RAD-seq genotyping

Hui Yu, Xin-Xin You, Jia Li, Xin-Hui Zhang, Shuai-Shuai Zhang, Shoujia Jiang, Xueqiang Lin, Hao-Ran Lin, Zi-Ning Meng, Q. Shi

Science China Life Sciences

DOI

2018

Assessing the genetic diversity of the critically endangered Chinese sturgeon Acipenser sinensis using mitochondrial markers and genome-wide single-nucleotide polymorphisms from RAD-seq

Jian Liu, Xin-Xin You, Pao Xu, P. Zhuang, Yue-Ping Zheng, Kai Zhang, Min Wang, Yunyun Lv, Gangchun Xu, Feng Zhao, Jianhui Wu, Houyong Fan, Jia-Nan Xu, Zhiqiang Ruan, Chao Bian, Kai Liu, Dong Xu, Jin-Hui Chen, Jun-Min Xu, Q. Shi

Science China Life Sciences

DOI

2018

The Complete Mitochondrial Genome of Glyptothorax macromaculatus Provides a Well-Resolved Molecular Phylogeny of the Chinese Sisorid Catfishes

Yunyun Lv, Yanping Li, Zhiqiang Ruan, Chao Bian, Xin-Xin You, Junxing Yang, Wansheng Jiang, Q. Shi

Genes

DOI

2018

Mudskippers and Their Genetic Adaptations to an Amphibious Lifestyle

Xin-Xin You, Min Sun, Jia Li, Chao Bian, Jie-Ming Chen, Yunhai Yi, Hui Yu, Q. Shi

Animals

DOI

2018

A Comparative Genomic Survey Provides Novel Insights into Molecular Evolution of l-Aromatic Amino Acid Decarboxylase in Vertebrates

Yanping Li, Yunyun Lv, Chao Bian, Xin-Xin You, L. Deng, Q. Shi

Molecules

DOI

2018

Genome Assembly for a Yunnan-Guizhou Plateau “3E” Fish, Anabarilius grahami (Regan), and Its Evolutionary and Genetic Applications

Wansheng Jiang, Ying Qiu, Xiaofu Pan, Yuanwei Zhang, Xiao-Ai Wang, Yunyun Lv, Chao Bian, Jia Li, Xin-Xin You, Jie-Ming Chen, Kun-Feng Yang, Jin-Long Yang, Chao Sun, Qian Liu, Le Cheng, Junxing Yang, Q. Shi

Frontiers in Genetics

DOI

2018

Construction of high-density genetic linkage maps and QTL mapping in the golden pompano

Guo-Qing Zhang, Xin-Hui Zhang, Hengzhen Ye, Shoujia Jiang, Hui Yu, Jia Li, Q. Shi, Guo-Hua Chen, Zhi Zhou, Jian Luo, Xin-Xin You

DOI

2018

Genome and Transcriptome Sequencing of the Astaxanthin-Producing Green Microalga, Haematococcus pluvialis

Qiu-Lan Luo, Chao Bian, M. Tao, Yu Huang, Yihong Zheng, Yunyun Lv, Jia Li, Chao-Gang Wang, Xin-Xin You, Bin Jia, Jun-Min Xu, Jiancheng Li, Ze Li, Q. Shi, Zhangli Hu

Genome Biology and Evolution

DOI

2018

Whole-Genome Sequencing of Chinese Yellow Catfish Provides a Valuable Genetic Resource for High-Throughput Identification of Toxin Genes

Shi-Yong Zhang, Jia Li, Q. Qin, Wei Liu, Chao Bian, Yunhai Yi, Ming-Hua Wang, Li-Qiang Zhong, Xin-Xin You, Sheng-Kai Tang, Yanshan Liu, Yu Huang, Ruo-Bo Gu, Jun-Min Xu, Wen-Ji Bian, Q. Shi, Xiao-Hui Chen

Toxins

DOI

2018

Transcriptomic evidence of adaptive tolerance to high environmental ammonia in mudskippers.

Xin-Xin You, Jie-Ming Chen, Chao Bian, Yunhai Yi, Zhiqiang Ruan, Jia Li, Xin-Hui Zhang, Hui Yu, Jun-Min Xu, Q. Shi

Genomics

DOI

2018

Draft genome of the protandrous Chinese black porgy, Acanthopagrus schlegelii

Zhi-Yong Zhang, Kai Zhang, Shu-Yin Chen, Zhi-Wei Zhang, Jin-Yong Zhang, Xin-Xin You, Chao Bian, Jin Xu, Chao-Feng Jia, J. Qiang, Fei Zhu, Hong-Xia Li, Hai-Lin Liu, Dehua Shen, Zhonghong Ren, Jie-Ming Chen, Jia Li, Tianheng Gao, Ruo-Bo Gu, Jun-Min Xu, Q. Shi, Pao Xu

GigaScience

DOI

2017

中国正式启动水产生物 “ 十百千 ” 组学育种计划

Yingjie Liu, Pao Xu, Jun-Min Xu, Yu Huang, Yongxin Liu, Hui Fang, Yinchang Hu, Xin-Xin You, Chao Bian, Min Sun, Ruo-Bo Gu, Lifeng Cui, Xianliang Zhang, Peng Xu, Q. Shi

DOI

2017

China is initiating the Aquatic 10-100-1,000 Genomics Program

Yingjie Liu, Pao Xu, Jun-Min Xu, Yu Huang, Yongxin Liu, H. Fang, Yinchang Hu, Xin-Xin You, Chao Bian, Min Sun, Ruo-Bo Gu, Lifeng Cui, Xianliang Zhang, Peng Xu, Qiong Shi

Science China Life Sciences

DOI

2017

High-Throughput Identification of Antimicrobial Peptides from Amphibious Mudskippers

Yunhai Yi, Xin-Xin You, Chao Bian, Shi-Xi Chen, Zhao Lv, L. Qiu, Q. Shi

Marine Drugs

DOI

2017

Draft genome of the Northern snakehead, Channa argus

Jian Xu, Chao Bian, Kun-Ci Chen, Gui-Ming Liu, Yanliang Jiang, Q. Luo, Xin-Xin You, Wenzhu Peng, Jia Li, Yu Huang, Yunhai Yi, Chuan-Ju Dong, H.-W. Deng, Song-Hao Zhang, Han-Yuan Zhang, Q. Shi, Peng Xu

GigaScience

DOI

2017

De novo assembly and comparative transcriptome analysis of the foot from Chinese green mussel (Perna viridis) in response to cadmium stimulation

Xin-Hui Zhang, Zhiqiang Ruan, Xin-Xin You, Jin-Tu Wang, Jie-Ming Chen, Chao Peng, Q. Shi

PLoS ONE

DOI

2017

Draft genome of the lined seahorse, Hippocampus erectus

Qiang Lin, Ying Qiu, Ruo-Bo Gu, Meng Xu, Jia Li, Chao Bian, Hui-Xian Zhang, Geng Qin, Yan-Hong Zhang, W. Luo, Jie-Ming Chen, Xin-Xin You, Ming-Jun Fan, Min Sun, Pao Xu, Byrappa Venkatesh, Jun-Ming Xu, H. Fu, Q. Shi

GigaScience

DOI

2017

A Genomic Survey of SCPP Family Genes in Fishes Provides Novel Insights into the Evolution of Fish Scales

Yunyun Lv, K. Kawasaki, Jia Li, Yanping Li, Chao Bian, Yu Huang, Xin-Xin You, Q. Shi

International Journal of Molecular Sciences

DOI

2017

Whole genome sequencing of Chinese clearhead icefish, Protosalanx hyalocranius

Kai Liu, Dong Xu, Jia Li, Chao Bian, Jin-Rong Duan, Yan-Feng Zhou, Minying Zhang, Xin-Xin You, Yang You, Jie-Ming Chen, Hui Yu, Gangchun Xu, Di-An Fang, J. Qiang, Shu-Lun Jiang, Jie He, Jun-Min Xu, Q. Shi, Zhi-Yong Zhang, Pao Xu

GigaScience

DOI

2017

A Comparative Genomic and Transcriptomic Survey Provides Novel Insights into N-Acetylserotonin Methyltransferase (ASMT) in Fish

Kai Zhang, Zhiqiang Ruan, Jia Li, Chao Bian, Xin-Xin You, S. Coon, Q. Shi

Molecules

DOI

2016

A chromosome-level genome assembly of the Asian arowana, Scleropages formosus

Jia Li, Chao Bian, Yin-Chang Hu, Xi-Dong Mu, Xue-Yan Shen, V. Ravi, I. Kuznetsova, Ying Sun, Xin-Xin You, Ying Qiu, Xin-Hui Zhang, Hui Yu, Yu Huang, Pao Xu, Ruo-Bo Gu, Jun-Min Xu, L. Orbán, B. Venkatesh, Qiong Shi

Scientific Data

DOI

2016

The complete mitochondrial genome of Florida gar (Lepisosteus platyrhincus)

Hui-Mei Yu, Jia Li, Zhiqiang Ruan, Xingyu Ma, Jimin Zhang, Min Wang, Q. Shi, Xin-Xin You

Mitochondrial DNA Part B: Resources

DOI

2016

Draft genome of the Chinese mitten crab, Eriocheir sinensis

Linsheng Song, Chao Bian, Yong-Ju Luo, Ling-Ling Wang, Xin-Xin You, Jia Li, Ying Qiu, Xingyu Ma, Zhifei Zhu, Liang Ma, Zhao-Ge Wang, Ying Lei, J. Qiang, Hong-Xia Li, Ju-Hua Yu, A. Wong, Jun-Min Xu, Q. Shi, Pao Xu

GigaScience

DOI

2016

High-quality genome assembly of channel catfish, Ictalurus punctatus

Xiao-Hui Chen, Li-Qiang Zhong, Chao Bian, Pao Xu, Ying Qiu, Xin-Xin You, Shi-Yong Zhang, Yu Huang, Jia Li, Ming-Hua Wang, Q. Qin, Xiao-Hua Zhu, Chao Peng, A. Wong, Zhifei Zhu, Min Wang, Ruo-Bo Gu, Jun-Min Xu, Q. Shi, Wen-Ji Bian

GigaScience

DOI

2016

Transcriptome analysis reveals the molecular mechanisms underlying growth superiority in a novel grouper hybrid (Epinephelus fuscogutatus♀ × E. lanceolatus♂)

Ying Sun, Chuan-Yu Guo, Deng-Dong Wang, Xiao-Feng Li, Ling Xiao, Xin-Hui Zhang, Xin-Xin You, Q. Shi, Guojun Hu, Chao Fang, Hao-Ran Lin, Yong Zhang

BMC Genetics

DOI

2016

High-throughput identification of novel conotoxins from the Chinese tubular cone snail (Conus betulinus) by multi-transcriptome sequencing

Chao Peng, G. Yao, Bingmiao Gao, Chong-Xu Fan, Chao Bian, Jin-Tu Wang, Ying Cao, Bo Wen, Ya-Bing Zhu, Zhiqiang Ruan, Xiao-Fei Zhao, Xin-Xin You, Jie Bai, Jia Li, Zhilong Lin, Shi-Jie Zou, Xin-Hui Zhang, Ying Qiu, Jie-Ming Chen, S. Coon, Jia'an Yang, Ji-Sheng Chen, Q. Shi

GigaScience

DOI

2016

Genome-Wide Mapping of Growth-Related Quantitative Trait Loci in Orange-Spotted Grouper (Epinephelus coioides) Using Double Digest Restriction-Site Associated DNA Sequencing (ddRADseq)

Hui Yu, Xin-Xin You, Jia Li, Han-Kui Liu, Zi-Ning Meng, Ling Xiao, Haifa Zhang, Hao-Ran Lin, Yong Zhang, Q. Shi

International Journal of Molecular Sciences

DOI

2016

Comparative Transcriptomic Study of Muscle Provides New Insights into the Growth Superiority of a Novel Grouper Hybrid

Ying Sun, Yu Huang, Guojun Hu, Xin-Hui Zhang, Zhiqiang Ruan, Xiaomeng Zhao, Chuan-Yu Guo, Zhujing Tang, Xiaofeng Li, Xin-Xin You, Hao-Ran Lin, Yong Zhang, Q. Shi

PLoS ONE

DOI

2016

Cloning and expression of two hepcidin genes in the mudskipper (Boleophthalmus pectinirostris) provides insights into their roles in male reproductive immunity.

Zhe Li, W. Hong, Hengtong Qiu, Yu-Ting Zhang, Ming-Shu Yang, Xin-Xin You, Shi-Xi Chen

Fish and Shellfish Immunology

DOI

2016

The complete mitochondrial genome sequence of the giant mudskipper, Periophthalmodon schlosseri (Perciformes: gobiidae)

Yunhai Yi, Kai Zhang, Jie-Ming Chen, Zhiqiang Ruan, Xin-Xin You, Q. Shi

Mitochondrial DNA Part B: Resources

DOI

2016

Additional file 5: Figure S15â S17. of The Sinocyclocheilus cavefish genome provides insights into cave adaptation

Junxing Yang, Xiao-Li Chen, Jie Bai, Dong-Ming Fang, Ying Qiu, Wansheng Jiang, Hui Yuan, Chao Bian, Jiang Lu, Shiyang He, Xiaofu Pan, Yaolei Zhang, Xiao-Ai Wang, Xin-Xin You, Yongsi Wang, Ying Sun, Danqing Mao, Yong Liu, G. Fan, He Zhang, Xiao-Yong Chen, Xin-Hui Zhang, Lan-Ping Zheng, Jin-Tu Wang, Le Cheng, Jie-Ming Chen, Zhiqiang Ruan, Jia Li, Hui Yu, Chao Peng, Xingyu, Jun-Min Xu, You He, Zheng-Feng Xu, Pao Xu, Jian Wang, Huan-Ming Yang, Jun Wang, T. Whitten, Xun Xu, Q. Shi

2016

The Asian arowana (Scleropages formosus) genome provides new insights into the evolution of an early lineage of teleosts

Chao Bian, Yin-Chang Hu, V. Ravi, I. Kuznetsova, Xue-Yan Shen, Xi-Dong Mu, Ying Sun, Xin-Xin You, Jia Li, Xiaofeng Li, Ying Qiu, Boon-Hui Tay, N. Thevasagayam, Aleksey Komissarov, V. Trifonov, Marsel R Kabilov, A. Tupikin, Jian-Ren Luo, Yi Liu, Hong-Mei Song, Chao Liu, Xuejie Wang, Dan-Gen Gu, Ye-Xin Yang, Wujiao Li, G. Polgar, G. Fan, Peng Zeng, He Zhang, Zi-Jun Xiong, Zhujing Tang, Chao Peng, Zhiqiang Ruan, Hui Yu, Jie-Ming Chen, Ming-Jun Fan, Yu Huang, Min Wang, Xiaomeng Zhao, Guojun Hu, Huan-Ming Yang, Jian Wang, Jun Wang, Xun Xu, Linsheng Song, Gangchun Xu, Pao Xu, Jun-Min Xu, S. O'Brien, L. Orbán, B. Venkatesh, Q. Shi

Scientific Reports

DOI

2016

Marine Genomics: Recent Advancement and Wide-Area Applications

Xin-Xin You, Chao Bian, Xiao-Dong Fang, Ying Sun, Jie Bai, Chao Peng, Xin-Hui Zhang, Q. Shi

DOI

2016

The complete mitochondrial genome of the yellow-spotted triggerfish (Pseudobalistes fuscus)

Kai Zhang, Xin-Xin You, Jun-Min Xu, Q. Shi

Mitochondrial DNA Part B: Resources

DOI

2016

The complete mitochondrial genome of Indonesian snakehead, Channa micropeltes (Channiformes, Channidae)

Shoujia Jiang, Kai Zhang, Zhiqiang Ruan, Jun-Min Xu, Xin-Xin You, Q. Shi

Mitochondrial DNA Part B: Resources

DOI

2016

The Sinocyclocheilus cavefish genome provides insights into cave adaptation

Junxing Yang, Xiao-Li Chen, Jie Bai, Dong-Ming Fang, Ying Qiu, Wansheng Jiang, Hui Yuan, Chao Bian, Jiang Lu, Shiyang He, Xiaofu Pan, Yaolei Zhang, Xiao-Ai Wang, Xin-Xin You, Yongsi Wang, Ying Sun, Danqing Mao, Yong Liu, G. Fan, He Zhang, Xiao-Yong Chen, Xin-Hui Zhang, Lan-Ping Zheng, Jin-Tu Wang, Le Cheng, Jie-Ming Chen, Zhiqiang Ruan, Jia Li, Hui Yu, Chao Peng, Xingyu Ma, Jun-Min Xu, You He, Zhengfeng Xu, Pao Xu, J. Wang, H. Yang, Jun Wang, T. Whitten, Xun Xu, Q. Shi

BMC Biology

DOI

2015

中国南方红树林湿地弹涂鱼遗传多样性研究

李瑜，阮志强，昝启杰，石琼，游欣欣

《南方农业》

2015

弹涂鱼两栖习性的基因组学研究进展

游欣欣，卞超，陈洁明，孙颖，石琼

《海洋渔业》

2015

Construction of the High-Density Genetic Linkage Map and Chromosome Map of Large Yellow Croaker (Larimichthys crocea)

Jing-Qun Ao, Jia Li, Xin-Xin You, Yin-Nan Mu, Yang Ding, Kaiqiong Mao, Chao Bian, Peng-Fei Mu, Q. Shi, Xin-Hua Chen

International Journal of Molecular Sciences

DOI

2015

GHRH, PRP-PACAP and GHRHR Target Sequencing via an Ion Torrent Personal Genome Machine Reveals an Association with Growth in Orange-Spotted Grouper (Epinephelus coioides)

Liang Guo, Junhong Xia, Sen Yang, Mingming Li, Xin-Xin You, Zi-Ning Meng, Hao-Ran Lin

International Journal of Molecular Sciences

DOI

2015

Molecular Evolution of Aralkylamine N-Acetyltransferase in Fish: A Genomic Survey

Jia Li, Xin-Xin You, Chao Bian, Hui Yu, S. Coon, Q. Shi

International Journal of Molecular Sciences

DOI

2014

Cloning and expression of melatonin receptors in the mudskipper Boleophthalmus pectinirostris: their role in synchronizing its semilunar spawning rhythm.

Lu-Yan Hong, W. Hong, Wen-Bo Zhu, Q. Shi, Xin-Xin You, Shi-Xi Chen

General and Comparative Endocrinology

DOI

2014

Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes

Xin-Xin You, Chao Bian, Q. Zan, X. Xu, Xin Liu, Jie-Ming Chen, Jin-Tu Wang, Ying Qiu, Wujiao Li, Xin-Hui Zhang, Ying Sun, Shi-Xi Chen, W. Hong, Yu-Xiang Li, Shi-Feng Cheng, G. Fan, Chengcheng Shi, Jie Liang, Y. T. Tang, Cheng-Ye Yang, Zhiqiang Ruan, Jie Bai, Chao Peng, Qian Mu, Jun Lu, Ming-Jun Fan, Shuang Yang, Zhi-Yong Huang, Xuan-Ting Jiang, Xiao-Dong Fang, Guo-Jie Zhang, Yong Zhang, G. Polgar, Hui Yu, Jia Li, Zhong-Jian Liu, Guo-Qiang Zhang, V. Ravi, S. Coon, Jian Wang, Huanming Yang, B. Venkatesh, Jun Wang, Q. Shi

Nature Communications

DOI

2014

Xinxin etal 2014 mudskGenom SupplMat

Xin-Xin You, Chao Bian, Q. Zan, Xun Xu, Xin Liu, Jie-Ming Chen, Jin-Tu Wang, Ying Qiu, Wujiao Li, Xin-Hui Zhang, Ying Sun, Shi-Xi Chen, W. Hong, Yu-Xiang Li, Shi-Feng Cheng, G. Fan, Chengcheng Shi, Jie Liang, Y. T. Tang, Chengye Yang, Zhiqiang Ruan, Jie Bai, Chao Peng, Qian Mu, Jun Lu, Ming-Jun Fan, Shuang Yang, Zhi-Yong Huang, Xuan-Ting Jiang, Xiao-Dong Fang, Guo-Jie Zhang, Yong Zhang, G. Polgar, Hui-Min Yu, Jia Li, Zhong-Jian Liu, Guo-Qiang Zhang, V. Ravi, S. Coon, Jian Wang, Huan-Ming Yang, B. Venkatesh, Jun Wang, Q. Shi

2013

大弹涂鱼aanat2基因cDNA克隆及其在生殖季节的表达

洪鹭燕，洪万树，刘东腾，张钰霆，游欣欣，石琼，张其永，陈仕玺

《厦门大学学报(自然科学版)》

2013

Construction of high-density genetic linkage maps for orange-spotted grouper Epinephelus coioides using multiplexed shotgun genotyping

Xin-Xin You, Li-Ping Shu, Shui-Sheng Li, Jie-Ming Chen, Jian Luo, Jun Lu, Qian Mu, Jie Bai, Qiuju Xia, Qingchun Chen, Yanjie Cai, Haifa Zhang, Guo-Hua Chen, Hao-Ran Lin, Yong Zhang, Q. Shi

BMC Genetics

DOI

2010

基于线粒体Cytb基因探讨我国日本囊对虾4个地理群体的遗传结构及种群分化

曾凡荣，王军，周孔霖，游欣欣，毛勇

《厦门大学学报(自然科学版)》

Identi fi cation and characterization of a male-speci fi c region in largemouth bass ( Micropterus Salmoides ) by whole-genome sequencing, resequencing and genomics comparison

Xin-Hui Zhang, Jun-Jian Dong, Zhiqiang Ruan, Fengying Gao, Wenchuan Zhou, Xin-Xin You, Jie-Ming Chen, Q. Shi, Xing Ye, Cheng-Fei Sun, Seyyed Morteza Hoseini, Liang-Yong Guo

会议论文

2018

大弹涂鱼TLR11基因家族的扩张

邱衡通，游欣欣，张钰霆，黄昇，洪万树，陈仕玺

《2018年中国水产学会学术年会》

研究方向

基因组育种

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