杨继｜复旦大学｜学者主页

2022

Origins of the seed: The “golden-trio hypothesis”

Shu-Nong Bai, Guang-Yuan Rao, Ji Yang

Frontiers in Plant Science

2022

Population genetic structure of Wikstroemia monnula highlights the necessity and feasibility of hierarchical analysis for a highly differentiated species

Chaoqiang Zhang, Yiwei Tang, De‐Feng Tian, Yanyan Huang, Guanghui Yang, Peng Nan, Yuguo Wang, Lingfeng Li, Zhiping Song, Ji Yang, Yang Zhong, Wenju Zhang

Frontiers in Plant Science

DOI

2021

The New Is Old: Novel Germination Strategy Evolved From Standing Genetic Variation in Weedy Rice

Chengchuan Zhou, Yang Feng, Gengyun Li, Mengli Wang, Jinjing Jian, Yu-Guo Wang, Wen-Ju Zhang, Zhi-Ping Song, Linfeng Li, B. Lu, Ji Yang

Frontiers in Plant Science

DOI

2021

Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola.

Jianling You, S. Lougheed, Yao Zhao, Guo-Jie Zhang, Wen-Sheng Liu, Fan Lu, Yu-Guo Wang, Wen-Ju Zhang, Ji Yang, L. Qiong, Zhi-Ping Song

Annals of Botany

DOI

2021

Interspecific Variation in the Unsaturation Level of Seed Oils Were Associated With the Expression Pattern Shifts of Duplicated Desaturase Genes and the Potential Role of Other Regulatory Genes

Mengli Wang, Le-Xuan Gao, Gengyun Li, Chengchuan Zhou, Jinjing Jian, Zhen Xing, Yu-Guo Wang, Wen-Ju Zhang, Zhi-Ping Song, Yong-Hong Hu, Ji Yang

Frontiers in Plant Science

DOI

2021

Compensation of Wild Plants Weakens the Effects of Crop-Wild Gene Flow on Wild Rice Populations

Dongxin Ouyang, Shan-Shan Dong, Man-Qiu Xiao, Jianling You, Yao Zhao, Yu-Guo Wang, Wen-Ju Zhang, Ji Yang, Zhi-Ping Song

Frontiers in Plant Science

DOI

2021

The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts

T. Wan, Zhiming Liu, I. Leitch, H. Xin, G. Maggs-Kölling, Yanbing Gong, Zhen Li, E. Marais, Yi-Ying Liao, C. Dai, F. Liu, Qijia Wu, Chi Song, Yadong Zhou, Wei-Chang Huang, Kai Jiang, Qi Wang, Yong Yang, Zhi-Xiang Zhong, Ming Yang, Xue Yan, Guang-Wan Hu, Chen Hou, Ying-Juan Su, Shi-Xiu Feng, Ji Yang, Ji-Jun Yan, Jin-Fang Chu, Fan Chen, Jin-Hua Ran, Xiaoquan Wang, Y. Van de Peer, A. Leitch, Qingfeng Wang

Nature Communications

DOI

2020

Concerted and birth-and-death evolution of 26S ribosomal DNA in Camellia L.

Min Zhang, Yiwei Tang, Ying Xu, Takahiro Yonezawa, Yang Shao, Yu-Guo Wang, Zhi-Ping Song, Ji Yang, Wen-Ju Zhang

Annals of Botany

DOI

2020

Epigenetics and the success of invasive plants

Jeannie M. Mounger, M. Ainouche, O. Bossdorf, Armand Cavé-Radet, Bo Li, M. Parepa, A. Salmon, Ji Yang, C. Richards

Philosophical Transactions of the Royal Society of London. Biological Sciences

DOI

2019

High Genetic Diversity With Weak Phylogeographic Structure of the Invasive Spartina alterniflora (Poaceae) in China

Lei Shang, Lin-Feng Li, Zhi-Ping Song, Yi Wang, Ji Yang, Chuan‐Chao Wang, S. Qiu, Jingxin Huang, M. Nie, L. Wolfe, Bo Li

Frontiers in Plant Science

DOI

2019

Transient Stability of Epigenetic Population Differentiation in a Clonal Invader

Wen Shi, Xiao-Jie Chen, Le-Xuan Gao, Cheng-Yuan Xu, X. Ou, O. Bossdorf, Ji Yang, Yu-Peng Geng

Frontiers in Plant Science

DOI

2019

Effects of parental genetic divergence on gene expression patterns in interspecific hybrids of Camellia

Min Zhang, Yiwei Tang, J. Qi, Xin-Kai Liu, Dan-Feng Yan, Nai-Sheng Zhong, N. Tao, Ji-Yin Gao, Yu-Guo Wang, Zhi-Ping Song, Ji Yang, Wen-Ju Zhang

BMC Genomics

DOI

2018

栽培植物野生近缘种的保护与利用

赵耀，李耕耘，杨继

《生物多样性》

2018

Phylogenomic detection and functional prediction of genes potentially important for plant meiosis.

Luoyan Zhang, H. Kong, Hong Ma, Ji Yang

Gene

DOI

2018

A genome for gnetophytes and early evolution of seed plants

T. Wan, Zhi-ming Liu, Ling-Fei Li, A. Leitch, I. Leitch, R. Lohaus, Zhong-Jian Liu, H. Xin, Yanbing Gong, Yang Liu, Wen-Cai Wang, Ling-Zhi Chen, Yong Yang, L. J. Kelly, Ji Yang, Jin-Ling Huang, Zhen Li, Ping Liu, Li Zhang, Hong-Mei Liu, Hui Wang, S. Deng, Meng Liu, Ji Li, Lu Ma, Yan Liu, Yang Lei, Wei Xu, Lingqing Wu, Fan Liu, Qian Ma, Xinran Yu, Zhi Jiang, Guo-Qiang Zhang, Shao-hua Li, Rui-Qiang Li, Shou-Zhou Zhang, Qingfeng Wang, Y. Van de Peer, Jin-Bo Zhang, Xiao-Ming Wang

Nature Plants

DOI

2018

Response to climate change of montane herbaceous plants in the genus Rhodiola predicted by ecological niche modelling

Jianling You, Xiaoya Qin, S. Ranjitkar, S. Lougheed, Ming-Cheng Wang, Wen Zhou, Dongxin Ouyang, Yin Zhou, Jian-Chu Xu, Wen-Ju Zhang, Yu-Guo Wang, Ji Yang, Zhi-Ping Song

Scientific Reports

DOI

2018

Increased population epigenetic diversity of the clonal invasive species Alternanthera philoxeroides in response to salinity stress.

Wen Shi, Xia Hu, Xiao-Jie Chen, X. Ou, Ji Yang, Yu-Peng Geng

Genes & Genetic Systems

DOI

2017

入侵科学的发展需要新视角和新技术

杨继，李博

《生物多样性》

2017

Differentially Expressed microRNAs and Target Genes Associated with Plastic Internode Elongation in Alternanthera philoxeroides in Contrasting Hydrological Habitats

Gengyun Li, Ying Deng, Yu-Peng Geng, Chengchuan Zhou, Yu-Guo Wang, Wen-Ju Zhang, Zhi-Ping Song, Le-Xuan Gao, Ji Yang

Frontiers in Plant Science

DOI

2017

chloroplast glutamine synthetase(ncpGS) gene, partial cds; nuclear gene for chloroplast product

Shan-Mei Cheng, Lan Qiang, Fan Lu, Takahiro Yonezawa, Gan-Qiang Yin, Zhi-Ping Song, Yu-Guo Wang, Ji Yang, Wen-Ju Zhang

DOI

2017

PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast

Shan-Mei Cheng, Lan Qiang, Fan Lu, Takahiro Yonezawa, Gan-Qiang Yin, Zhi-Ping Song, Yu-Guo Wang, Ji Yang, Wen-Ju Zhang

DOI

2017

Phylogeography of Sophora moorcroftiana Supports Wu’s Hypothesis on the Origin of Tibetan Alpine Flora

Shan-Mei Cheng, L. Qiong, Fan Lu, Takahiro Yonezawa, Gan-Qiang Yin, Zhi-Ping Song, Yu-Guo Wang, Ji Yang, Wen-Ju Zhang

Journal of Heredity

DOI

2017

atpB-rbcL intergenic spacer, partial sequence chloroplast

Shan-Mei Cheng, Lan Qiang, Fan Lu, Takahiro Yonezawa, Gan-Qiang Yin, Zhi-Ping Song, Yu-Guo Wang, Ji Yang, Wen-Ju Zhang

DOI

2016

Extensive Transcriptome Changes Underlying the Flower Color Intensity Variation in Paeonia ostii

Le-Xuan Gao, Hongxing Yang, Hong-fang Liu, Ji Yang, Yong-Hong Hu

Frontiers in Plant Science

DOI

2016

Selection of Reference Genes for Quantitative Real-Time PCR during Flower Development in Tree Peony (Paeonia suffruticosa Andr.)

Jian Li, Ji-Gang Han, Yong-Hong Hu, Ji Yang

Frontiers in Plant Science

DOI

2016

Increased novel single nucleotide polymorphisms in weedy rice populations associated with the change of farming styles: Implications in adaptive mutation and evolution

Dong‐Yuan Song, Zhe Wang, Zhuo-Jun Song, Chengchuan Zhou, Pengpeng Xu, Jie Yang, Ji Yang, B. Lu

DOI

2015

Gene Expression Reaction Norms Unravel the Molecular and Cellular Processes Underpinning the Plastic Phenotypes of Alternanthera Philoxeroides in Contrasting Hydrological Conditions

Le-Xuan Gao, Yu-Peng Geng, Hongxing Yang, Yong-Hong Hu, Ji Yang

Frontiers in Plant Science

DOI

2015

Genetic divergence of weedy rice populations associated with their geographic location and coexisting conspecific crop: Implications on adaptive evolution of agricultural weeds

Zhuo-Jun Song, Zhe Wang, Yang Feng, Nan Yao, Ji Yang, B. Lu

DOI

2013

Human evolution and human‐influenced evolution of organisms in changing environments

Ji Yang, B. Lu, Xun Gu

DOI

2012

Spatial Genetic Structure in Natural Populations of Phragmites australis in a Mosaic of Saline Habitats in the Yellow River Delta, China

Le-Xuan Gao, Shaoqing Tang, Liqiong Zhuge, M. Nie, Zhu Zhu, Bo Li, Ji Yang

PLoS ONE

DOI

2012

Phylogeny of the Genus Chrysanthemum L.: Evidence from Single-Copy Nuclear Gene and Chloroplast DNA Sequences

Ping-Li Liu, Qian Wan, Yan-Ping Guo, Ji Yang, Guang-Yuan Rao

PLoS ONE

DOI

2012

Phylogeographic analyses of Phragmites australis in China: Native distribution and habitat preference of the haplotype that invaded North America

Jiaxing An, Qian Wang, Ji Yang, Jianquan Liu

DOI

2010

不同土壤水分和养分条件下喜旱莲子草与同属种生长状况的比较研究

王坤，杨继，陈家宽

《生物多样性》

2010

基因组学:理解植物入侵性的重要工具

尚蕾，央金卓嘎，杨继，李博

《生物多样性》

2009

水稻长链脂肪醇氧化酶基因OsFAO结构分析及其进化研究

赵仕兰，林志新，王曦，杨继，程奇，罗达

《分子植物育种》

2009

近缘种比较研究在植物入侵生态学中的应用

王坤，杨继，陈家宽

《生物多样性》

2008

表型可塑性变异的生态-发育机制及其进化意义

高乐旋，陈家宽，杨继

Journal of Systematics and Evolution

2008

Phenotypic plasticity: Eco-Devo and evolution

Le-Xuan Gao, Jia-Kuan Chen, Ji Yang

DOI

2006

Duplication and divergent evolution of the CHS and CHS-like genes in the chalcone synthase （CHS） superfamily

Ji Yang, Hongya Gu

DOI

2006

Comparative Study on the Aerial and Subterranean Flower Development in Amphicarpaea edgeworthii Benth. (Leguminosae: Papilionoideae), an Amphicarpic Species

Yi Zhang, Ji Yang, Guang-Yuan Rao

INTERNATIONAL JOURNAL PLANT SCIENCES

DOI

2005

Genetic diversity of an amphicarpic species, Amphicarpaea edgeworthii Benth. (Leguminosae) based on RAPD markers

Yi Zhang, Ji Yang, Guang-Yuan Rao

DOI

2004

Asymmetric evolution of duplicate genes encoding the CCAAT-binding factor NF-Y in plant genomes.

Ji Yang, Zengyan Xie, B. Glover

New Phytologist

DOI

2003

Likelihood Analysis of the Chalcone Synthase Genes Suggests the Role of Positive Selection in Morning Glories (Ipomoea)

Ji Yang, Hongya Gu, Zi-Heng Yang

Journal of Molecular Evolution

DOI

2003

Interpopulation Congruence in Chinese Primula ovalifolia Revealed by Chemical and Molecular Markers Using Essential Oils and ISSRs

Peng Nan, S. Peng, S. Shi, H. Ren, Ji Yang, Yang Zhong

Zeitschrift für Naturforschung C - A Journal of Biosciences

DOI

2002

Duplication and adaptive evolution of the chalcone synthase genes of Dendranthema (Asteraceae).

Ji Yang, Jin-Xia Huang, Hongya Gu, Yang Zhong, Zi-Heng Yang

Molecular biology and evolution

DOI

2001

植物多倍体基因组的形成与进化

杨继

Journal of Systematics and Evolution

2001

Systematic position of Polygonatum simizui (Convallariaceae) based on morphological, cytological and chloroplast DNA sequence data

Shian-Chee Wu, Ji Yang, Guang-Yuan Rao

DOI

2000

叶表皮及种皮特征在黄精族系统学研究中的应用

吕海亮，吴世安，杨继，饶广远

Journal of Systematics and Evolution

2000

叶绿体DNA片段的RFLP分析在黄精族系统学研究中的应用

吴世安，吕海亮，杨继，饶广远，尤瑞麟，葛颂，钟扬

Journal of Systematics and Evolution

2000

A systematic study of the tribe Polygonateae (Liliaceae s.l.) with reference to the evidence from leaf abaxial epidermis and seed coat.

Hai-Liang Lu, Shi-An Wu, Ji Yang, Guang-Yuan Rao

2000

Molecular systematic studies on the tribe Polygonateae (s.l.) in China based on RFLP data of PCR-amplified chloroplast DNA fragments.

Shi-An Wu, Hai-Liang Lu, Ji Yang, Guang-Yuan Rao, Rui-Lin You, S. Ge

2000

Genetic Relationship and Genomic in situ Hybridization Analysis of the Three Genomes in Triticum aestivum

Da-Yong Li, Xue-Yong Zhang, Ji Yang, Guang-Yuan Rao

1999

植物居群遗传变异的空间自相关分析

何田华，杨继，饶广远

《植物学报》

1992

黄精属细胞分类学研究——Ⅲ.国产6种黄精的染色体数目和核型

杨继，汪劲武，李懋学

《植物科学学报》

1991

数量分析方法在种内变异研究中的运用

杨继

《植物学报》

1991

蓼属植物果皮微形态特征及其分类意义初探

杨继，李映虹，汪劲武

《西北植物学报》

1988

数值分类学

杨继

《生命世界》

1988

黄精属细胞分类学研究——Ⅱ.四川金佛山地区黄精属植物核型

杨继，汪劲武，李懋学

《植物科学学报》

精选作品

期刊论文

Origins of the seed: The “golden-trio hypothesis”

Population genetic structure of Wikstroemia monnula highlights the necessity and feasibility of hierarchical analysis for a highly differentiated species

The New Is Old: Novel Germination Strategy Evolved From Standing Genetic Variation in Weedy Rice

Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola.

Interspecific Variation in the Unsaturation Level of Seed Oils Were Associated With the Expression Pattern Shifts of Duplicated Desaturase Genes and the Potential Role of Other Regulatory Genes

Compensation of Wild Plants Weakens the Effects of Crop-Wild Gene Flow on Wild Rice Populations

The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts

Concerted and birth-and-death evolution of 26S ribosomal DNA in Camellia L.

Epigenetics and the success of invasive plants

High Genetic Diversity With Weak Phylogeographic Structure of the Invasive Spartina alterniflora (Poaceae) in China

Transient Stability of Epigenetic Population Differentiation in a Clonal Invader

Effects of parental genetic divergence on gene expression patterns in interspecific hybrids of Camellia

栽培植物野生近缘种的保护与利用

Phylogenomic detection and functional prediction of genes potentially important for plant meiosis.

A genome for gnetophytes and early evolution of seed plants

Response to climate change of montane herbaceous plants in the genus Rhodiola predicted by ecological niche modelling

Increased population epigenetic diversity of the clonal invasive species Alternanthera philoxeroides in response to salinity stress.

入侵科学的发展需要新视角和新技术

Differentially Expressed microRNAs and Target Genes Associated with Plastic Internode Elongation in Alternanthera philoxeroides in Contrasting Hydrological Habitats

chloroplast glutamine synthetase(ncpGS) gene, partial cds; nuclear gene for chloroplast product

PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast

Phylogeography of Sophora moorcroftiana Supports Wu’s Hypothesis on the Origin of Tibetan Alpine Flora

atpB-rbcL intergenic spacer, partial sequence chloroplast

Extensive Transcriptome Changes Underlying the Flower Color Intensity Variation in Paeonia ostii

Selection of Reference Genes for Quantitative Real-Time PCR during Flower Development in Tree Peony (Paeonia suffruticosa Andr.)

Increased novel single nucleotide polymorphisms in weedy rice populations associated with the change of farming styles: Implications in adaptive mutation and evolution

Gene Expression Reaction Norms Unravel the Molecular and Cellular Processes Underpinning the Plastic Phenotypes of Alternanthera Philoxeroides in Contrasting Hydrological Conditions

Genetic divergence of weedy rice populations associated with their geographic location and coexisting conspecific crop: Implications on adaptive evolution of agricultural weeds

Human evolution and human‐influenced evolution of organisms in changing environments

Spatial Genetic Structure in Natural Populations of Phragmites australis in a Mosaic of Saline Habitats in the Yellow River Delta, China

Phylogeny of the Genus Chrysanthemum L.: Evidence from Single-Copy Nuclear Gene and Chloroplast DNA Sequences

Phylogeographic analyses of Phragmites australis in China: Native distribution and habitat preference of the haplotype that invaded North America

不同土壤水分和养分条件下喜旱莲子草与同属种生长状况的比较研究

基因组学:理解植物入侵性的重要工具

水稻长链脂肪醇氧化酶基因OsFAO结构分析及其进化研究

近缘种比较研究在植物入侵生态学中的应用

表型可塑性变异的生态-发育机制及其进化意义

Phenotypic plasticity: Eco-Devo and evolution

Duplication and divergent evolution of the CHS and CHS-like genes in the chalcone synthase （CHS） superfamily

Comparative Study on the Aerial and Subterranean Flower Development in Amphicarpaea edgeworthii Benth. (Leguminosae: Papilionoideae), an Amphicarpic Species

Genetic diversity of an amphicarpic species, Amphicarpaea edgeworthii Benth. (Leguminosae) based on RAPD markers

Asymmetric evolution of duplicate genes encoding the CCAAT-binding factor NF-Y in plant genomes.

Likelihood Analysis of the Chalcone Synthase Genes Suggests the Role of Positive Selection in Morning Glories (Ipomoea)

Interpopulation Congruence in Chinese Primula ovalifolia Revealed by Chemical and Molecular Markers Using Essential Oils and ISSRs

Duplication and adaptive evolution of the chalcone synthase genes of Dendranthema (Asteraceae).

植物多倍体基因组的形成与进化

Systematic position of Polygonatum simizui (Convallariaceae) based on morphological, cytological and chloroplast DNA sequence data

叶表皮及种皮特征在黄精族系统学研究中的应用

叶绿体DNA片段的RFLP分析在黄精族系统学研究中的应用

A systematic study of the tribe Polygonateae (Liliaceae s.l.) with reference to the evidence from leaf abaxial epidermis and seed coat.

Molecular systematic studies on the tribe Polygonateae (s.l.) in China based on RFLP data of PCR-amplified chloroplast DNA fragments.

Genetic Relationship and Genomic in situ Hybridization Analysis of the Three Genomes in Triticum aestivum

植物居群遗传变异的空间自相关分析

黄精属细胞分类学研究——Ⅲ.国产6种黄精的染色体数目和核型

数量分析方法在种内变异研究中的运用

蓼属植物果皮微形态特征及其分类意义初探

数值分类学

黄精属细胞分类学研究——Ⅱ.四川金佛山地区黄精属植物核型

研究方向