俞瑜｜复旦大学｜学者主页

2025

The Arabidopsis histone methylation reader MRG2 interacts with eIF4A3 to regulate alternative splicing and circadian rhythms.

Yaxue Huang, Jiabing Wu, Xiang Li, Jiachen Wang, Mengmeng Ma, Wen Jiang, Wen-Xian Shen, Yu Yu, Ai-Wu Dong

The Plant Cell

DOI

2023

拟南芥H3K27甲基转移酶CLF响应环境温度和参与温度形态建成研究

谢文浩，李成章，俞瑜

《华南农业大学学报》

2022

水稻染色质重塑因子OsINO80通过调节植物激素水平参与避荫反应

王培亮，尹刘翻，俞瑜

《复旦学报(自然科学版)》

2021

NTP4 modulates miRNA accumulation via asymmetric modification of miRNA/miRNA*duplex

Wenwen Kong, Xianxin Dong, Yongbing Ren, Yuan Wang, Xintong Xu, Beixin Mo, Yu Yu, Xiaoyan Wang

Science China Life Sciences

2021

“生物化学”线上课程教学模式的构建——以复旦大学为例

俞瑜，董爱武

《高校生物学教学研究(电子版)》

2021

H3K36 methyltransferase SDG708 enhances drought tolerance by promoting abscisic acid biosynthesis in rice.

Kai Chen, Kangxi Du, Yi Shi, Liufan Yin, W. Shen, Yu Yu, Bing Liu, Ai-Wu Dong

New Phytologist

DOI

2021

Correction: ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis

Yu Yu, Lijuan Ji, B. Le, J. Zhai, Jiayi Chen, Elizabeth Luscher, Lei Gao, Chun-Yan Liu, Xiao-Feng Cao, Bei-Xin Mo, Jinbiao Ma, B. Meyers, Xue-Mei Chen

PLoS Biology

DOI

2020

MRG1/2 histone methylation readers and HD2C histone deacetylase associate in repression of the florigen gene FT to set a proper flowering time in response to day-length changes.

Zhi-Hao Guo, Ze-Peng Li, Yuhao Liu, Zengxuan An, Maolin Peng, W. Shen, Ai-Wu Dong, Yu Yu

New Phytologist

DOI

2019

The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment

Bing Liu, Yuhao Liu, Baihui Wang, Q. Luo, Jin-Lei Shi, J. Gan, W. Shen, Yu Yu, Ai-Wu Dong

Nature Communications

DOI

2019

Plant Noncoding RNAs: Hidden Players in Development and Stress Responses

Yu Yu, Yuchan Zhang, Xue-Mei Chen, Yue-Qin Chen

Annual Review of Cell and Developmental Biology

DOI

2019

H3K4me2 functions as a repressive epigenetic mark in plants

Yuhao Liu, Kun-Peng Liu, Liufan Yin, Yu Yu, Ji Qi, W. Shen, Jun Zhu, Yi-Jing Zhang, Ai-Wu Dong

Epigenetics & Chromatin

DOI

2018

Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation

Q. Fei, Yu Yu, Li Liu, Yu Zhang, P. Baldrich, Qing Dai, Xue-Mei Chen, B. Meyers

Proceedings of the National Academy of Sciences of the United States of America

DOI

2018

Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development.

Chao Li, Yuhao Liu, W. Shen, Yu Yu, Ai-Wu Dong

Journal of Integrative Plant Biology

DOI

2017

SET DOMAIN GROUP701 encodes a H3K4-methytransferase and regulates multiple key processes of rice plant development.

Kun-Peng Liu, Yu Yu, Ai-Wu Dong, W. Shen

New Phytologist

DOI

2017

The ‘how’ and ‘where’ of plant microRNAs

Yu Yu, Tian-Ran Jia, Xue-Mei Chen

New Phytologist

DOI

2017

Investigating the Mechanism of MicroRNA Turnover and Characterizing the Role of RCD1 During Small RNA Metabolism in Arabidopsis

Yu Yu

2017

ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis

Yu Yu, Lijuan Ji, B. Le, J. Zhai, Jiayi Chen, Elizabeth Luscher, Lei Gao, Chun-Yan Liu, Xiao-Feng Cao, Bei-Xin Mo, Jinbiao Ma, B. Meyers, Xue-Mei Chen

PLoS Biology

DOI

2016

Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis

Sheng-Ben Li, B. Le, Xuan Ma, Shao-Fang Li, C. You, Yu Yu, Bailong Zhang, Lin Liu, Lei Gao, Ting Shi, Yonghui Zhao, Bei-Xin Mo, Xiao-Feng Cao, Xue-Mei Chen

eLife

DOI

2016

SET DOMAIN GROUP 708, a histone H3 lysine 36-specific methyltransferase, controls flowering time in rice (Oryza sativa).

Bing Liu, Gang Wei, Jin-Lei Shi, Jing Jin, T. Shen, Ting Ni, W. Shen, Yu Yu, Ai-Wu Dong

New Phytologist

DOI

2016

PARylation of the forkhead‐associated domain protein DAWDLE regulates plant immunity

Baomin Feng, Shisong Ma, Si-Xue Chen, Ning Zhu, Shu-Xin Zhang, Bin Yu, Yu Yu, B. Le, Xue-Mei Chen, S. Dinesh-Kumar, Libo Shan, P. He

EMBO Reports

DOI

2016

A partial loss-of-function mutation in an Arabidopsis RNA polymerase III subunit leads to pleiotropic defects

Kaeli C. M. Johnson, Yu Yu, Lei Gao, R. Eng, G. Wasteneys, Xue-Mei Chen, Xin Li

Journal of Experimental Botany

DOI

2015

MORF-RELATED GENE 702 , a Reader Protein of Trimethylated Histone H 3 Lysine 4 and Histone H 3 Lysine 36 , Is Involved in Brassinosteroid-Regulated Growth and Flowering Time Control in Rice 1 [ OPEN ]

Jing Jin, Jin-Lei Shi, Bing Liu, Yan-Chao Liu, Ying Huang, Yu Yu, Ai-Wu Dong

2015

Distinct and Cooperative Activities of HESO1 and URT1 Nucleotidyl Transferases in MicroRNA Turnover in Arabidopsis

Bin Tu, Li Liu, Chi Xu, J. Zhai, Sheng-Ben Li, M. A. López, Yuan-Yuan Zhao, Yu Yu, Vanitharani Ramachandran, Guodong Ren, Bin Yu, Shi-Gui Li, B. Meyers, Bei-Xin Mo, Xue-Mei Chen

PLoS Genetics

DOI

2014

Roles of small RNAs in soybean defense against Phytophthora sojae infection

J. Wong, Lei Gao, Yang Yang, J. Zhai, S. Arikit, Yu Yu, Shu-Yi Duan, V. Chan, Qin Xiong, Jun Yan, Sheng-Ben Li, Ren-Yi Liu, Yuan-Chao Wang, G. Tang, B. Meyers, Xue-Mei Chen, Wenbo Ma

The Plant Journal

DOI

2014

The Exosome and Trans-Acting Small Interfering RNAs Regulate Cuticular Wax Biosynthesis during Arabidopsis Inflorescence Stem Development1[OPEN]

Patricia Lam, Li-Fang Zhao, Nathan Eveleigh, Yu Yu, Xue-Mei Chen, L. Kunst

Plant Physiology

DOI

2014

Arabidopsis AL PHD-PRC1 Complexes Promote Seed Germination through H3K4me3-to-H3K27me3 Chromatin State Switch in Repression of Seed Developmental Genes

Anne Molitor, Zhong-Yuan Bu, Yu Yu, W. Shen

PLoS Genetics

DOI

2014

Polycomb-group histone methyltransferase CLF is required for proper somatic recombination in Arabidopsis.

Nan Chen, Wangbin Zhou, Ying-Xiang Wang, Ai-Wu Dong, Yu Yu

Journal of Integrative Plant Biology

DOI

2014

Regulation of Arabidopsis Flowering by the Histone Mark Readers MRG1/2 via Interaction with CONSTANS to Modulate FT Expression

Zhong-Yuan Bu, Yu Yu, Ze-Peng Li, Yan-Chao Liu, Wen Jiang, Ying Huang, Ai-Wu Dong

PLoS Genetics

DOI

2013

microRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in Arabidopsis

Sheng-Ben Li, Lin Liu, X. Zhuang, Yu Yu, Xi-Gang Liu, Xia Cui, Lijuan Ji, Z. Pan, Xiao-Feng Cao, Bei-Xin Mo, Fuchun Zhang, N. Raikhel, Liwen Jiang, Xue-Mei Chen

Cell

DOI

2013

SDG2-Mediated H3K4 Methylation Is Required for Proper Arabidopsis Root Growth and Development

Xiaozhen Yao, Hai-Yang Feng, Yu Yu, Ai-Wu Dong, W. Shen

PLoS ONE

DOI

2012

H3K36 methylation is critical for brassinosteroid-regulated plant growth and development in rice.

Peng-Fei Sui, Jing Jin, Shengliang Ye, Chen Mu, Juan Gao, Hai-Yang Feng, W. Shen, Yu Yu, Ai-Wu Dong

The Plant Journal

DOI

2012

HESO1, a nucleotidyl transferase in Arabidopsis, uridylates unmethylated miRNAs and siRNAs to trigger their degradation

Yuan-Yuan Zhao, Yu Yu, J. Zhai, Vanitharani Ramachandran, T. T. Dinh, B. Meyers, Bei-Xin Mo, Xue-Mei Chen

Current Biology

DOI

2011

The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana

Y. Kim, Binglian Zheng, Yu Yu, S. Won, Bei-Xin Mo, Xue-Mei Chen

EMBO Journal

DOI

2010

SDG714 regulates specific gene expression and consequently affects plant growth via H3K9 dimethylation.

Bo Ding, Yan Zhu, Zhong-Yuan Bu, W. Shen, Yu Yu, Ai-Wu Dong

Journal of Integrative Plant Biology

DOI

2009

An update on histone lysine methylation in plants

Yu Yu, Zhong-Yuan Bu, W. Shen, Ai-Wu Dong

DOI

2007

Plant SET- and RING-associated domain proteins in heterochromatinization.

Shi-Ming Liu, Yu Yu, Y. Ruan, D. Meyer, M. Wolff, Lin Xu, Ning Wang, A. Steinmetz, W. Shen

The Plant Journal

DOI

2007

Molecular characterization of three rice SET-domain proteins

Bo Ding, Yan Zhu, Juan Gao, Yu Yu, Kai-Ming Cao, W. Shen, Ai-Wu Dong

DOI

2005

Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36

Zhong Zhao, Yu Yu, D. Meyer, Chengjun Wu, W. Shen

Nature Cell Biology

DOI

2004

Molecular characterization of the tobacco SET domain protein NtSET1 unravels its role in histone methylation, chromatin binding, and segregation.

Yu Yu, Ai-Wu Dong, W. Shen

The Plant Journal

DOI

精选作品

期刊论文

The Arabidopsis histone methylation reader MRG2 interacts with eIF4A3 to regulate alternative splicing and circadian rhythms.

拟南芥H3K27甲基转移酶CLF响应环境温度和参与温度形态建成研究

水稻染色质重塑因子OsINO80通过调节植物激素水平参与避荫反应

NTP4 modulates miRNA accumulation via asymmetric modification of miRNA/miRNA*duplex

“生物化学”线上课程教学模式的构建——以复旦大学为例

H3K36 methyltransferase SDG708 enhances drought tolerance by promoting abscisic acid biosynthesis in rice.

Correction: ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis

MRG1/2 histone methylation readers and HD2C histone deacetylase associate in repression of the florigen gene FT to set a proper flowering time in response to day-length changes.

The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment

Plant Noncoding RNAs: Hidden Players in Development and Stress Responses

H3K4me2 functions as a repressive epigenetic mark in plants

Biogenesis of a 22-nt microRNA in Phaseoleae species by precursor-programmed uridylation

Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development.

SET DOMAIN GROUP701 encodes a H3K4-methytransferase and regulates multiple key processes of rice plant development.

The ‘how’ and ‘where’ of plant microRNAs

Investigating the Mechanism of MicroRNA Turnover and Characterizing the Role of RCD1 During Small RNA Metabolism in Arabidopsis

ARGONAUTE10 promotes the degradation of miR165/6 through the SDN1 and SDN2 exonucleases in Arabidopsis

Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis

SET DOMAIN GROUP 708, a histone H3 lysine 36-specific methyltransferase, controls flowering time in rice (Oryza sativa).

PARylation of the forkhead‐associated domain protein DAWDLE regulates plant immunity

A partial loss-of-function mutation in an Arabidopsis RNA polymerase III subunit leads to pleiotropic defects

MORF-RELATED GENE 702 , a Reader Protein of Trimethylated Histone H 3 Lysine 4 and Histone H 3 Lysine 36 , Is Involved in Brassinosteroid-Regulated Growth and Flowering Time Control in Rice 1 [ OPEN ]

Distinct and Cooperative Activities of HESO1 and URT1 Nucleotidyl Transferases in MicroRNA Turnover in Arabidopsis

Roles of small RNAs in soybean defense against Phytophthora sojae infection

The Exosome and Trans-Acting Small Interfering RNAs Regulate Cuticular Wax Biosynthesis during Arabidopsis Inflorescence Stem Development1[OPEN]

Arabidopsis AL PHD-PRC1 Complexes Promote Seed Germination through H3K4me3-to-H3K27me3 Chromatin State Switch in Repression of Seed Developmental Genes

Polycomb-group histone methyltransferase CLF is required for proper somatic recombination in Arabidopsis.

Regulation of Arabidopsis Flowering by the Histone Mark Readers MRG1/2 via Interaction with CONSTANS to Modulate FT Expression

microRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in Arabidopsis

SDG2-Mediated H3K4 Methylation Is Required for Proper Arabidopsis Root Growth and Development

H3K36 methylation is critical for brassinosteroid-regulated plant growth and development in rice.

HESO1, a nucleotidyl transferase in Arabidopsis, uridylates unmethylated miRNAs and siRNAs to trigger their degradation

The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana

SDG714 regulates specific gene expression and consequently affects plant growth via H3K9 dimethylation.

An update on histone lysine methylation in plants

Plant SET- and RING-associated domain proteins in heterochromatinization.

Molecular characterization of three rice SET-domain proteins

Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36

Molecular characterization of the tobacco SET domain protein NtSET1 unravels its role in histone methylation, chromatin binding, and segregation.

会议论文

H3K4甲基转移酶SDG701调控水稻的生长发育

Structural studies on MRG701 chromodomain reveal a novel dimerization interface of MRG proteins in green plants

研究方向