刘如龙｜上海海洋大学｜学者主页

2026

Genomic Insights into the Metabolic Traits and Adaptation Mechanisms of Mesophilic Campylobacteria Represented by a Novel Sulfurospirillum Species from Shallow-Water Hydrothermal Vent

Xi Du, Mingye Sun, Shan Cheng, Jiang‐Shiou Hwang, Rulong Liu, Jiasong Fang, Lei Wang

Microorganisms

DOI

2026

Community-wide dynamics drive microbial degradation of halogenated organic pollutants in the Mariana Trench under in-situ relevant conditions

Jiani He, Li Sheng Wang, Yuheng Liu, Yuheng Liu, Zhixuan Wang, ZhiAo Xu, Rulong Liu

Environmental Research

DOI

2026

Pressure‐dependent adaptation strategies implied by the dissimilatory iron reducer Orenia metallireducens Z6

Shuyi Li, Jiahao Pei, Jiasong Fang, Rulong Liu, Yuli Wei, Xianyu Huang, Guang Yang, Min Liu, Qin Dong Lin, Robert A. Sanford, Hongbo Shao, Yongguang Jiang, Yuntao Hu, Zhou Qing Jiang, Qi Feng, Yu He, Chenxi Zhang, Yizhou Fan, Yiran Dong, Liang Shi

mLife

DOI

2025

Extensive halogenated organic compound reservoirs and active microbial dehalogenation in Mariana Trench sediments

Rulong Liu, Hui Wei, Zhiao Xu, Yuheng Liu, Jiani He, Zhixuan Wang, Li Wang, Min Luo, Jiasong Fang, Federico Baltar, Yunping Xu, Qirui Liang, Liting Huang

Isme Journal，Vol. 19, No. 1

DOI

2025

Temperature shapes the biogeography of rdhA and reductive dehalogenators in sediment across northwestern Pacific marginal seas

Yangru Xu, Yingchun Han, Xiyang Dong, Yanlei Feng, Fabai Wu, Fengmin Xing, Junyu He, Matthew James Rogers, Xiwu Luan, Rulong Liu, Jianzhong He, Hongyue Dang, Dongdong Zhang

Journal of Hazardous Materials

DOI

2025

Glucose priming effect on microbial intercellular metabolic flux diversity in a marine intertidal sediment

Tao Ji, Zhiao Xu, Lihong Wen, Yuxue Yang, Yue Wu, Xueqin Zhao, Ruilian Yao, Rulong Liu, Yunping Xu, Weichao Wu

PLoS ONE

DOI

2025

Halogenation and Dehalogenation Potential of Microorganisms in Yangtze River Waters

Zhixuan Wang, Lin Hu, Li Wang, Rulong Liu

Microorganisms

DOI

2025

A hunting ground for predatory bacteria at the Zhenbei seamount in the South China Sea

Zhimeng Li, Dayu Zou, Rulong Liu, Juntong Pan, Junkai Huang, Jun Ma, Liting Huang, Li‐Ting Huang, Jiani He, Lulu Fu, Xiaowei Zheng, Jiasong Fang, Jiasong Fang, Hailiang Dong, Meng Li, Li Huang, Li Huang, Xin Dai

ISME Communications

DOI

2024

Comparative Genomics Reveal Distinct Environment Preference and Functional Adaptation Among Lineages of Gemmatimonadota

Jiangtao Du, Zhixuan Wang, Lin Hu, Li Wang, Jiasong Fang, Rulong Liu

Microorganisms

DOI

2024

Novel isolates of hydrogen-oxidizing chemolithoautotrophic Sulfurospirillum provide insight to the functions and adaptation mechanisms of Campylobacteria in shallow-water hydrothermal vents

Li Wang, Xinyi Cheng, Yizhe Guo, Junwei Cao, Mingye Sun, Jiang‐Shiou Hwang, Rulong Liu, Jiasong Fang

mSystems

DOI

2024

Community Composition and Functional Characterization of Microorganisms in Surface Sediment of the New Britain Trench

Lin Hu, Zhixuan Wang, Zixuan Wang, Li Wang, Jiasong Fang, Rulong Liu

Current Microbiology

DOI

2024

Determining the abundance, composition and spatial distribution of organohalogens in marine sediments using combustion-ion chromatography

Hui Wei, Yuheng Liu, Yuheng Liu, Liting Huang, Jiasong Fang, Jiasong Fang, Rulong Liu

Marine Environmental Research

DOI

2024

Tepidibacillus marianensis sp. nov., a novel heterotrophic iron-reducing bacterium isolated from Mariana Trench sediment

Shuyi Li, Chenxi Li, Jiahao Pei, Rulong Liu, Jiasong Fang, Yuli Wei, Yu He, Shuzhen Li, Qi Feng, Chenxi Zhang, Tianci Guo, Yongguang Jiang, Yidan Hu, Zhou Jiang, Liang Shi, Yiran Dong

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2024

Tracing Organophosphate Ester Pollutants in Hadal Trenches─Distribution, Possible Origins, and Transport Mechanisms

Jingqian Xie, Gaoxin Zhang, Chuchu Chen, Min Luo, Hongzhou Xu, Duofu Chen, Rulong Liu, Yingming Li, Qinghua Zhang, Yu Zhang, Xiaotong Peng, Lisheng He, Tian Lin, Guibin Jiang

Environmental Science & Technology

DOI

2024

Biogeochemical cycling of halogenated organic compounds in the ocean: Current progress and future directions

Yuheng Liu, Yuheng Liu, Li Wang, Rulong Liu, Jiasong Fang

Deep Sea Research Part I Oceanographic Research Papers

DOI

2024

Metagenomic characterization of a novel non-ammonia-oxidizing Thaumarchaeota from hadal sediment

Ruyi Zhang, Yan-Ren Wang, Rulong Liu, Sung‐Keun Rhee, Guoping Zhao, Zhe‐Xue Quan

Microbiome

DOI

2023

Editorial: Microbiology of deep-sea carbon cycling

Rulong Liu, Yong Wang, Gordon Webster

Frontiers in Microbiology

DOI

2023

Biogeographic distribution, ecotype partitioning and controlling factors of Chloroflexi in the sediments of six hadal trenches of the Pacific Ocean

Jiaxin Wu, Li Wang, Jiangtao Du, Yuheng Liu, Lin Hu, Hui Wei, Jiasong Fang, Rulong Liu

The Science of The Total Environment

DOI

2023

A symbiotic bacterium of Antarctic fish reveals environmental adaptability mechanisms and biosynthetic potential towards antibacterial and cytotoxic activities

Yu Xiao, Fangfang Yan, Yukun Cui, Jiangtao Du, Guangzhao Hu, Wanying Zhai, Rulong Liu, Zhizhen Zhang, Jiasong Fang, Liangbiao Chen, Xi Yu

Frontiers in Microbiology

DOI

2022

马里亚纳海沟表层沉积物中微生物的群落组成和功能特征

魏星，王丽，王紫玄，彭青卿，李咏琪，许元棋，方家松，刘如龙

《上海海洋大学学报》

2022

Metagenomic insights into the functions of microbial communities in sulfur-rich sediment of a shallow-water hydrothermal vent off Kueishan Island

Li Wang, Ziyi Shen, Xinyi Cheng, Jiang‐Shiou Hwang, Yizhe Guo, Mingye Sun, Junwei Cao, Rulong Liu, Jiasong Fang

Frontiers in Microbiology

DOI

2022

Complete genome sequence of a multiple-stress-tolerant bacterium Halomonas piezotolerans NBT06E8T isolated from a deep-sea sediment sample of the New Britain Trench

Jiahua Wang, Zhe Xie, Ying Liu, Fangfang Yan, Junwei Cao, Rulong Liu, Li Wang, Yuli Wei, Jiasong Fang

3 Biotech

DOI

2022

Novel Chloroflexi genomes from the deepest ocean reveal metabolic strategies for the adaptation to deep-sea habitats

Rulong Liu, Xing Lai Wei, Weizhi Song, Li Wang, Junwei Cao, Jiaxin Wu, Torsten Thomas, Tao Jin, Zixuan Wang, Wenxia Wei, Yuli Wei, Haofeng Zhai, Yao Cheng, Ziyi Shen, Jiangtao Du, Jiasong Fang

Microbiome

DOI

2022

Microbial Community Structure and Ecological Networks during Simulation of Diatom Sinking

Ying Liu, Mengchu Zeng, Zhe Xie, Daliang Ning, Jizhong Z. Zhou, Xi Yu, Rulong Liu, Li Zhang, Jiasong Fang

Microorganisms

DOI

2021

Culture Enrichment Combined With Long-Read Sequencing Facilitates Genomic Understanding of Hadal Sediment Microbes

Huan Wang, Meng Wang, Shen Fan, Jie Lu, Yi Lan, Menggong Li, Jiangyan Li, Rulong Liu, Jin Sun, Jiasong Fang, Pei‐Yuan Qian, Yu‐Zhong Zhang, Weipeng Zhang

Frontiers in Marine Science

DOI

2021

Evidence for Long-Term Anthropogenic Pollution: The Hadal Trench as a Depository and Indicator for Dissemination of Antibiotic Resistance Genes

Huiying Yang, Rulong Liu, Huafeng Liu, Chen Wang, Xiaole Yin, Ming Zhang, Jiasong Fang, Tong Zhang, Liping Ma

Environmental Science & Technology

DOI

2021

Community structure and activity potentials of archaeal communities in hadal sediments of the Mariana and Mussau trenches

Zixuan Wang, Li Wang, Rulong Liu, Zhenzhen Li, Jiaxin Wu, Xing Lai Wei, Wenxia Wei, Jiasong Fang, Junwei Cao, Yuli Wei, Zhe Xie

Marine Life Science & Technology

DOI

2021

Population structure, activity potential and ecotype partitioning ofPseudoalteromonasalong the vertical water column of the New Britain Trench

Wenxia Wei, Li Wang, Jiasong Fang, Rulong Liu

FEMS Microbiology Letters

DOI

2021

Novel Chloroflexi genomes from the Challenger Deep reveal metabolic strategies for the adaptation to deep-sea habitats

Rulong Liu, Li Wang, Xin Lan Wei, Weizhi Song, Jiasong Fang

Goldschmidt Abstracts

DOI

2020

Transitions in microbial communities along two sediment cores collected from the landward walls of the New Britain trench

Li Wang, Rulong Liu, Xing Lai Wei, Zixuan Wang, Ziyi Shen, Junwei Cao, Yuli Wei, Zhe Xie, Liangbiao Chen, Jiasong Fang

Marine Biology

DOI

2020

Complete genome sequence of a piezophilic bacterium Salinimonas sediminis N102T, isolated from deep-sea sediment of the New Britain Trench

Junyi Xue, Jiasong Fang, Hongge Zhang, Yuli Wei, Li Wang, Rulong Liu, Junwei Cao

Marine Genomics

DOI

2020

Bulk and Active Sediment Prokaryotic Communities in the Mariana and Mussau Trenches

Rulong Liu, Zixuan Wang, Li Wang, Zhenzhen Li, Jiasong Fang, Xing Lai Wei, Wenxia Wei, Junwei Cao, Yuli Wei, Zhe Xie

Frontiers in Microbiology

DOI

2020

Muricauda hadalis sp. nov., a novel piezophile isolated from hadopelagic water of the Mariana Trench and reclassification of Muricauda antarctica as a later heterotypic synonym of Muricauda teanensis

Yan Zhang, Yuxin Gao, Jiahao Pei, Junwei Cao, Zhe Xie, Rulong Liu, Lı Wang, Yuli Wei, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2020

Halomonas piezotolerans sp. nov., a multiple-stress-tolerant bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Fangfang Yan, Jiasong Fang, Junwei Cao, Yuli Wei, Rulong Liu, Li Wang, Zhe Xie

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2020

Potentially Active Microbes in the Sediment of Hadal Trenches and their Metabolic Potentials: Implications to Organic Carbon Degaradation in Hadal Sediments

Rulong Liu, Li Wang, Zixuan Wang, Xin Wei, Weizhi Song, Jiasong Fang

Goldschmidt Abstracts

DOI

2019

Physiological and genomic features of Paraoceanicella profunda gen. nov., sp. nov., a novel piezophile isolated from deep seawater of the Mariana Trench

Ping Liu, Wanzhen Ding, Qiliang Lai, Rulong Liu, Yuli Wei, Li Wang, Zhe Xie, Junwei Cao, Jiasong Fang

MicrobiologyOpen

DOI

2019

Georhizobium profundi gen. nov., sp. nov., a piezotolerant bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Junwei Cao, Yuli Wei, Qiliang Lai, Yunjie Wu, Junhao Deng, Jianyang Li, Rulong Liu, Li Wang, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2019

Alteromonas indica Lin et al. 2018 is a later heterotypic synonym of Salinimonas sediminis Cao et al. 2018

Junwei Cao, Wanzhen Ding, Qiliang Lai, Yuli Wei, Rulong Liu, Li Wang, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2019

Paracoccus sediminilitoris sp. nov., isolated from a tidal flat sediment

Yuli Wei, Junwei Cao, Huimin Yao, Haiyan Mao, Kelei Zhu, Meng Li, Rulong Liu, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2019

Marinomonas shanghaiensis sp. nov., isolated from the junction between an ocean and a freshwater lake

Yuli Wei, Junwei Cao, Haiyan Mao, Jiahao Pei, Rulong Liu, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2018

Salinimonas sediminis sp. nov., a piezophilic bacterium isolated from a deep-sea sediment sample from the New Britain Trench

Junwei Cao, Qiliang Lai, Ping Liu, Yuli Wei, Li Wang, Rulong Liu, Jiasong Fang

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DOI

2018

Marinobacter profundi sp. nov., a slightly halophilic bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Junwei Cao, Ping Liu, Renju Liu, Hai‐Nan Su, Yuli Wei, Rulong Liu, Jiasong Fang

Antonie van Leeuwenhoek

DOI

2018

Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench

Rulong Liu, Li Wang, Qianfeng Liu, Zixuan Wang, Zhenzhen Li, Jiasong Fang, Li Zhang, Min Luo

Frontiers in Microbiology

DOI

2017

Diversity of Total Bacterial Communities and Chemoautotrophic Populations in Sulfur-Rich Sediments of Shallow-Water Hydrothermal Vents off Kueishan Island, Taiwan

Li Wang, Man Kit Cheung, Rulong Liu, Chong Kim Wong, Hoi Shan Kwan, Jiang-Shiou Hwang

Microbial Ecology，Vol. 730, No. 30

DOI

2017

The hadal biosphere: Recent insights and new directions

Rulong Liu, Li Wang, Yuli Wei, Jiasong Fang

Deep Sea Research Part II Topical Studies in Oceanography

DOI

精选作品

期刊论文

Genomic Insights into the Metabolic Traits and Adaptation Mechanisms of Mesophilic Campylobacteria Represented by a Novel Sulfurospirillum Species from Shallow-Water Hydrothermal Vent

Community-wide dynamics drive microbial degradation of halogenated organic pollutants in the Mariana Trench under in-situ relevant conditions

Pressure‐dependent adaptation strategies implied by the dissimilatory iron reducer Orenia metallireducens Z6

Extensive halogenated organic compound reservoirs and active microbial dehalogenation in Mariana Trench sediments

Temperature shapes the biogeography of rdhA and reductive dehalogenators in sediment across northwestern Pacific marginal seas

Glucose priming effect on microbial intercellular metabolic flux diversity in a marine intertidal sediment

Halogenation and Dehalogenation Potential of Microorganisms in Yangtze River Waters

A hunting ground for predatory bacteria at the Zhenbei seamount in the South China Sea

Comparative Genomics Reveal Distinct Environment Preference and Functional Adaptation Among Lineages of Gemmatimonadota

Novel isolates of hydrogen-oxidizing chemolithoautotrophic Sulfurospirillum provide insight to the functions and adaptation mechanisms of Campylobacteria in shallow-water hydrothermal vents

Community Composition and Functional Characterization of Microorganisms in Surface Sediment of the New Britain Trench

Determining the abundance, composition and spatial distribution of organohalogens in marine sediments using combustion-ion chromatography

Tepidibacillus marianensis sp. nov., a novel heterotrophic iron-reducing bacterium isolated from Mariana Trench sediment

Tracing Organophosphate Ester Pollutants in Hadal Trenches─Distribution, Possible Origins, and Transport Mechanisms

Biogeochemical cycling of halogenated organic compounds in the ocean: Current progress and future directions

Metagenomic characterization of a novel non-ammonia-oxidizing Thaumarchaeota from hadal sediment

Editorial: Microbiology of deep-sea carbon cycling

Biogeographic distribution, ecotype partitioning and controlling factors of Chloroflexi in the sediments of six hadal trenches of the Pacific Ocean

A symbiotic bacterium of Antarctic fish reveals environmental adaptability mechanisms and biosynthetic potential towards antibacterial and cytotoxic activities

马里亚纳海沟表层沉积物中微生物的群落组成和功能特征

Metagenomic insights into the functions of microbial communities in sulfur-rich sediment of a shallow-water hydrothermal vent off Kueishan Island

Complete genome sequence of a multiple-stress-tolerant bacterium Halomonas piezotolerans NBT06E8T isolated from a deep-sea sediment sample of the New Britain Trench

Novel Chloroflexi genomes from the deepest ocean reveal metabolic strategies for the adaptation to deep-sea habitats

Microbial Community Structure and Ecological Networks during Simulation of Diatom Sinking

Culture Enrichment Combined With Long-Read Sequencing Facilitates Genomic Understanding of Hadal Sediment Microbes

Evidence for Long-Term Anthropogenic Pollution: The Hadal Trench as a Depository and Indicator for Dissemination of Antibiotic Resistance Genes

Community structure and activity potentials of archaeal communities in hadal sediments of the Mariana and Mussau trenches

Population structure, activity potential and ecotype partitioning ofPseudoalteromonasalong the vertical water column of the New Britain Trench

Novel Chloroflexi genomes from the Challenger Deep reveal metabolic strategies for the adaptation to deep-sea habitats

Transitions in microbial communities along two sediment cores collected from the landward walls of the New Britain trench

Complete genome sequence of a piezophilic bacterium Salinimonas sediminis N102T, isolated from deep-sea sediment of the New Britain Trench

Bulk and Active Sediment Prokaryotic Communities in the Mariana and Mussau Trenches

Muricauda hadalis sp. nov., a novel piezophile isolated from hadopelagic water of the Mariana Trench and reclassification of Muricauda antarctica as a later heterotypic synonym of Muricauda teanensis

Halomonas piezotolerans sp. nov., a multiple-stress-tolerant bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Potentially Active Microbes in the Sediment of Hadal Trenches and their Metabolic Potentials: Implications to Organic Carbon Degaradation in Hadal Sediments

Physiological and genomic features of Paraoceanicella profunda gen. nov., sp. nov., a novel piezophile isolated from deep seawater of the Mariana Trench

Georhizobium profundi gen. nov., sp. nov., a piezotolerant bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Alteromonas indica Lin et al. 2018 is a later heterotypic synonym of Salinimonas sediminis Cao et al. 2018

Paracoccus sediminilitoris sp. nov., isolated from a tidal flat sediment

Marinomonas shanghaiensis sp. nov., isolated from the junction between an ocean and a freshwater lake

Salinimonas sediminis sp. nov., a piezophilic bacterium isolated from a deep-sea sediment sample from the New Britain Trench

Marinobacter profundi sp. nov., a slightly halophilic bacterium isolated from a deep-sea sediment sample of the New Britain Trench

Depth-Resolved Distribution of Particle-Attached and Free-Living Bacterial Communities in the Water Column of the New Britain Trench

Diversity of Total Bacterial Communities and Chemoautotrophic Populations in Sulfur-Rich Sediments of Shallow-Water Hydrothermal Vents off Kueishan Island, Taiwan

The hadal biosphere: Recent insights and new directions

预印本

Enrichment of halogenated organic compounds and their degrading microorganisms in the deepest ocean

Hydrostatic Pressure Regulates Microbial Structuring And Metabolic Functions In The Pelagic Ocean

研究方向